RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 DCAF12L1Q5VU92 463 aa10.78□□□□□ -0.68
CAPN1-225ENST00000533704 CDKAL1Q5VV42 579 aa10.78□□□□□ -0.68
CAPN1-225ENST00000533704 PEAR1Q5VY43 1037 aaPredicted RBP10.78□□□□□ -0.68
CAPN1-225ENST00000533704 ZNF776Q68DI1 518 aaPredicted RBP10.78□□□□□ -0.68
CAPN1-225ENST00000533704 RBM43Q6ZSC3 357 aaKnown RBP10.78□□□□□ -0.68
CAPN1-225ENST00000533704 SND1Q7KZF4 910 aaKnown RBP eCLIP10.78□□□□□ -0.68
CAPN1-225ENST00000533704 PHLDB2Q86SQ0 1253 aa10.78□□□□□ -0.68
CAPN1-225ENST00000533704 ZDHHC17Q8IUH5 632 aa10.78□□□□□ -0.68
CAPN1-225ENST00000533704 APCDD1Q8J025 514 aa10.78□□□□□ -0.68
CAPN1-225ENST00000533704 CCAR2Q8N163 923 aaKnown RBP10.78□□□□□ -0.68
CAPN1-225ENST00000533704 HDDC3Q8N4P3 179 aa10.78□□□□□ -0.68
CAPN1-225ENST00000533704 MSANTD4Q8NCY6 345 aa10.78□□□□□ -0.68
CAPN1-225ENST00000533704 DEFB124Q8NES8 71 aa10.78□□□□□ -0.68
CAPN1-225ENST00000533704 SLC20A1Q8WUM9 679 aa10.78□□□□□ -0.68
CAPN1-225ENST00000533704 CPA5Q8WXQ8 436 aa10.78□□□□□ -0.68
CAPN1-225ENST00000533704 TTC17Q96AE7 1141 aa10.78□□□□□ -0.68
CAPN1-225ENST00000533704 C18orf8Q96DM3 657 aa10.78□□□□□ -0.68
CAPN1-225ENST00000533704 LMLNQ96KR4 655 aa10.78□□□□□ -0.68
CAPN1-225ENST00000533704 RPL10LQ96L21 214 aaKnown RBP10.78□□□□□ -0.68
CAPN1-225ENST00000533704 STK33Q9BYT3 514 aa10.78□□□□□ -0.68
CAPN1-225ENST00000533704 GANQ9H2C0 597 aa10.78□□□□□ -0.68
CAPN1-225ENST00000533704 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.78□□□□□ -0.68
CAPN1-225ENST00000533704 SUSD2Q9UGT4 822 aa10.78□□□□□ -0.68
CAPN1-225ENST00000533704 STAP1Q9ULZ2 295 aa10.78□□□□□ -0.68
CAPN1-225ENST00000533704 SNX10Q9Y5X0 201 aa10.78□□□□□ -0.68
CAPN1-225ENST00000533704 CABIN1Q9Y6J0 2220 aa10.78□□□□□ -0.68
CAPN1-225ENST00000533704 DOCK9Q9BZ29 2069 aa10.78□□□□□ -0.68
CAPN1-225ENST00000533704 MAP1BP46821 2468 aaKnown RBP10.78□□□□□ -0.68
CAPN1-225ENST00000533704 LAMA1P25391 3075 aa10.78□□□□□ -0.68
CAPN1-225ENST00000533704 A0A1B0GVM2 712 aa10.77□□□□□ -0.69
CAPN1-225ENST00000533704 TCAF2A6NFQ2 919 aa10.77□□□□□ -0.69
CAPN1-225ENST00000533704 TTC34A8MYJ7 566 aa10.77□□□□□ -0.69
CAPN1-225ENST00000533704 EPHB6O15197 1021 aa10.77□□□□□ -0.69
CAPN1-225ENST00000533704 OPHN1O60890 802 aa10.77□□□□□ -0.69
CAPN1-225ENST00000533704 RNASEH1O60930 286 aaKnown RBP10.77□□□□□ -0.69
CAPN1-225ENST00000533704 SIN3BO75182 1162 aa10.77□□□□□ -0.69
CAPN1-225ENST00000533704 PAGE1O75459 146 aa10.77□□□□□ -0.69
CAPN1-225ENST00000533704 SEMA4FO95754 770 aa10.77□□□□□ -0.69
CAPN1-225ENST00000533704 MBD3O95983 291 aa10.77□□□□□ -0.69
CAPN1-225ENST00000533704 SYPP08247 313 aa10.77□□□□□ -0.69
CAPN1-225ENST00000533704 TFE3P19532 575 aaPredicted RBP10.77□□□□□ -0.69
CAPN1-225ENST00000533704 MZF1P28698 734 aaPredicted RBP10.77□□□□□ -0.69
CAPN1-225ENST00000533704 ACSL1P33121 698 aa10.77□□□□□ -0.69
CAPN1-225ENST00000533704 MATKP42679 507 aa10.77□□□□□ -0.69
CAPN1-225ENST00000533704 STK19P49842 368 aaPredicted RBP10.77□□□□□ -0.69
CAPN1-225ENST00000533704 IRAK1P51617 712 aa10.77□□□□□ -0.69
CAPN1-225ENST00000533704 ECT2LQ008S8 904 aa10.77□□□□□ -0.69
CAPN1-225ENST00000533704 DEUP1Q05D60 604 aa10.77□□□□□ -0.69
CAPN1-225ENST00000533704 SYCP1Q15431 976 aa10.77□□□□□ -0.69
CAPN1-225ENST00000533704 TTC31Q49AM3 519 aaPredicted RBP10.77□□□□□ -0.69
CAPN1-225ENST00000533704 CCDC183Q5T5S1 534 aa10.77□□□□□ -0.69
CAPN1-225ENST00000533704 TTC39BQ5VTQ0 682 aaPredicted RBP10.77□□□□□ -0.69
CAPN1-225ENST00000533704 FBXL22Q6P050 247 aa10.77□□□□□ -0.69
CAPN1-225ENST00000533704 LRSAM1Q6UWE0 723 aa10.77□□□□□ -0.69
CAPN1-225ENST00000533704 XYLT1Q86Y38 959 aa10.77□□□□□ -0.69
CAPN1-225ENST00000533704 MINDY1Q8N5J2 469 aa10.77□□□□□ -0.69
CAPN1-225ENST00000533704 ZNF397Q8NF99 534 aaPredicted RBP10.77□□□□□ -0.69
CAPN1-225ENST00000533704 EPS8L1Q8TE68 723 aa10.77□□□□□ -0.69
CAPN1-225ENST00000533704 IGSF8Q969P0 613 aa10.77□□□□□ -0.69
CAPN1-225ENST00000533704 MYO19Q96H55 970 aa10.77□□□□□ -0.69
CAPN1-225ENST00000533704 MRGPRX3Q96LB0 322 aa10.77□□□□□ -0.69
CAPN1-225ENST00000533704 SPAG5Q96R06 1193 aa10.77□□□□□ -0.69
CAPN1-225ENST00000533704 TBCBQ99426 244 aa10.77□□□□□ -0.69
CAPN1-225ENST00000533704 PRMT1Q99873 361 aaKnown RBP10.77□□□□□ -0.69
CAPN1-225ENST00000533704 C6orf106Q9H6K1 298 aaPredicted RBP10.77□□□□□ -0.69
CAPN1-225ENST00000533704 WDCPQ9H6R7 721 aa10.77□□□□□ -0.69
CAPN1-225ENST00000533704 FBRSQ9HAH7 460 aa10.77□□□□□ -0.69
CAPN1-225ENST00000533704 CAPN10Q9HC96 672 aa10.77□□□□□ -0.69
CAPN1-225ENST00000533704 PIGVQ9NUD9 493 aa10.77□□□□□ -0.69
CAPN1-225ENST00000533704 EIF2B4Q9UI10 523 aaKnown RBP10.77□□□□□ -0.69
CAPN1-225ENST00000533704 SLCO3A1Q9UIG8 710 aa10.77□□□□□ -0.69
CAPN1-225ENST00000533704 HS3ST4Q9Y661 456 aa10.77□□□□□ -0.69
CAPN1-225ENST00000533704 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.76□□□□□ -0.69
CAPN1-225ENST00000533704 EDDM13A0A1B0GTR0 161 aa10.76□□□□□ -0.69
CAPN1-225ENST00000533704 A0A1B0GTW7 788 aa10.76□□□□□ -0.69
CAPN1-225ENST00000533704 FAM47DPA6NHR8 397 aa10.76□□□□□ -0.69
CAPN1-225ENST00000533704 METTL12A8MUP2 240 aa10.76□□□□□ -0.69
CAPN1-225ENST00000533704 ARHGAP33O14559 1287 aa10.76□□□□□ -0.69
CAPN1-225ENST00000533704 FSBPO95073 299 aa10.76□□□□□ -0.69
CAPN1-225ENST00000533704 ADCY5O95622 1261 aa10.76□□□□□ -0.69
CAPN1-225ENST00000533704 LSM8O95777 96 aaKnown RBP10.76□□□□□ -0.69
CAPN1-225ENST00000533704 IGLV3-19P01714 112 aa10.76□□□□□ -0.69
CAPN1-225ENST00000533704 SRPRAP08240 638 aaKnown RBP10.76□□□□□ -0.69
CAPN1-225ENST00000533704 ZNF18P17022 549 aa10.76□□□□□ -0.69
CAPN1-225ENST00000533704 CDH5P33151 784 aaPredicted RBP10.76□□□□□ -0.69
CAPN1-225ENST00000533704 SOX5P35711 763 aa10.76□□□□□ -0.69
CAPN1-225ENST00000533704 NNMTP40261 264 aa10.76□□□□□ -0.69
CAPN1-225ENST00000533704 STAT1P42224 750 aa10.76□□□□□ -0.69
CAPN1-225ENST00000533704 PSMD8P48556 350 aa10.76□□□□□ -0.69
CAPN1-225ENST00000533704 NOMO3P69849 1222 aa10.76□□□□□ -0.69
CAPN1-225ENST00000533704 UBXN1Q04323 297 aa10.76□□□□□ -0.69
CAPN1-225ENST00000533704 ZNF252P-AS1Q0IIN9 211 aa10.76□□□□□ -0.69
CAPN1-225ENST00000533704 ZNF177Q13360 481 aaPredicted RBP10.76□□□□□ -0.69
CAPN1-225ENST00000533704 EIF4EBP2Q13542 120 aaPredicted RBP10.76□□□□□ -0.69
CAPN1-225ENST00000533704 HNRNPA1L2Q32P51 320 aaKnown RBP10.76□□□□□ -0.69
CAPN1-225ENST00000533704 OTUD1Q5VV17 481 aaPredicted RBP10.76□□□□□ -0.69
CAPN1-225ENST00000533704 SMYD5Q6GMV2 418 aa10.76□□□□□ -0.69
CAPN1-225ENST00000533704 C14orf80Q86SX3 495 aa10.76□□□□□ -0.69
CAPN1-225ENST00000533704 MMAAQ8IVH4 418 aaKnown RBP10.76□□□□□ -0.69
CAPN1-225ENST00000533704 AOPEPQ8N6M6 819 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms