RNA–Protein interactions for RNA: ENST00000533499.1

NXF1-216, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-216ENST00000533499 CHST9Q7L1S5 443 aa17.96■□□□□ 0.47
NXF1-216ENST00000533499 FLCNQ8NFG4 579 aa17.96■□□□□ 0.47
NXF1-216ENST00000533499 TRIM58Q8NG06 486 aa17.96■□□□□ 0.47
NXF1-216ENST00000533499 WFDC5Q8TCV5 224 aa17.96■□□□□ 0.47
NXF1-216ENST00000533499 EDAQ92838 391 aa17.96■□□□□ 0.47
NXF1-216ENST00000533499 MAK16Q9BXY0 300 aaKnown RBP17.96■□□□□ 0.47
NXF1-216ENST00000533499 MUC3BQ9H195 1237 aa17.96■□□□□ 0.47
NXF1-216ENST00000533499 ABCB8Q9NUT2 735 aa17.96■□□□□ 0.47
NXF1-216ENST00000533499 PPARGC1AQ9UBK2 798 aaKnown RBP17.96■□□□□ 0.47
NXF1-216ENST00000533499 TTC28Q96AY4 2481 aa17.96■□□□□ 0.47
NXF1-216ENST00000533499 COL4A2P08572 1712 aa17.95■□□□□ 0.46
NXF1-216ENST00000533499 IGLV3-10A0A075B6K4 115 aa17.95■□□□□ 0.46
NXF1-216ENST00000533499 CCDC66A2RUB6 948 aa17.95■□□□□ 0.46
NXF1-216ENST00000533499 FGF10O15520 208 aaPredicted RBP17.95■□□□□ 0.46
NXF1-216ENST00000533499 KAT7O95251 611 aa17.95■□□□□ 0.46
NXF1-216ENST00000533499 GLULP15104 373 aa17.95■□□□□ 0.46
NXF1-216ENST00000533499 CD70P32970 193 aa17.95■□□□□ 0.46
NXF1-216ENST00000533499 CSKP41240 450 aa17.95■□□□□ 0.46
NXF1-216ENST00000533499 SIGLEC14Q08ET2 396 aa17.95■□□□□ 0.46
NXF1-216ENST00000533499 GRSF1Q12849 480 aaKnown RBP eCLIP17.95■□□□□ 0.46
NXF1-216ENST00000533499 LMAN2Q12907 356 aa17.95■□□□□ 0.46
NXF1-216ENST00000533499 SEMA3BQ13214 749 aa17.95■□□□□ 0.46
NXF1-216ENST00000533499 DPYSL3Q14195 570 aa17.95■□□□□ 0.46
NXF1-216ENST00000533499 C5orf22Q49AR2 442 aa17.95■□□□□ 0.46
NXF1-216ENST00000533499 FSCBQ5H9T9 825 aa17.95■□□□□ 0.46
NXF1-216ENST00000533499 RNF219Q5W0B1 726 aaPredicted RBP17.95■□□□□ 0.46
NXF1-216ENST00000533499 ASTLQ6HA08 431 aaPredicted RBP17.95■□□□□ 0.46
NXF1-216ENST00000533499 RFX6Q8HWS3 928 aa17.95■□□□□ 0.46
NXF1-216ENST00000533499 ETFBKMTQ8IXQ9 262 aa17.95■□□□□ 0.46
NXF1-216ENST00000533499 ZNF557Q8N988 423 aaPredicted RBP17.95■□□□□ 0.46
NXF1-216ENST00000533499 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.95■□□□□ 0.46
NXF1-216ENST00000533499 CSPG4P5Q96PW8 444 aa17.95■□□□□ 0.46
NXF1-216ENST00000533499 SPON2Q9BUD6 331 aa17.95■□□□□ 0.46
NXF1-216ENST00000533499 SLC2A11Q9BYW1 496 aa17.95■□□□□ 0.46
NXF1-216ENST00000533499 TBC1D17Q9HA65 648 aa17.95■□□□□ 0.46
NXF1-216ENST00000533499 FBRSL1Q9HCM7 1045 aaKnown RBP17.95■□□□□ 0.46
NXF1-216ENST00000533499 KIAA1522Q9P206 1035 aaPredicted RBP17.95■□□□□ 0.46
NXF1-216ENST00000533499 MRPS17Q9Y2R5 130 aaKnown RBP17.95■□□□□ 0.46
NXF1-216ENST00000533499 DOCK4Q8N1I0 1966 aa17.94■□□□□ 0.46
NXF1-216ENST00000533499 MIF4GDA9UHW6 222 aaKnown RBP17.94■□□□□ 0.46
NXF1-216ENST00000533499 ZRANB2O95218 330 aaKnown RBP eCLIP17.94■□□□□ 0.46
NXF1-216ENST00000533499 PABPC1P11940 636 aaKnown RBP17.94■□□□□ 0.46
NXF1-216ENST00000533499 ERCC2P18074 760 aa17.94■□□□□ 0.46
NXF1-216ENST00000533499 CTNNA2P26232 953 aa17.94■□□□□ 0.46
NXF1-216ENST00000533499 CTNNA1P35221 906 aaKnown RBP17.94■□□□□ 0.46
NXF1-216ENST00000533499 ZNF135P52742 658 aaPredicted RBP17.94■□□□□ 0.46
NXF1-216ENST00000533499 SEC13P55735 322 aa17.94■□□□□ 0.46
NXF1-216ENST00000533499 RWDD2BP57060 319 aa17.94■□□□□ 0.46
NXF1-216ENST00000533499 MESP2Q0VG99 397 aa17.94■□□□□ 0.46
NXF1-216ENST00000533499 RPS6KA1Q15418 735 aa17.94■□□□□ 0.46
NXF1-216ENST00000533499 PREPLQ4J6C6 727 aaPredicted RBP17.94■□□□□ 0.46
NXF1-216ENST00000533499 C6orf118Q5T5N4 469 aa17.94■□□□□ 0.46
NXF1-216ENST00000533499 KAZNQ674X7 775 aa17.94■□□□□ 0.46
NXF1-216ENST00000533499 TRIM67Q6ZTA4 783 aa17.94■□□□□ 0.46
NXF1-216ENST00000533499 NUDT18Q6ZVK8 323 aa17.94■□□□□ 0.46
NXF1-216ENST00000533499 ANKS1BQ7Z6G8 1248 aa17.94■□□□□ 0.46
NXF1-216ENST00000533499 KATNAL2Q8IYT4 538 aa17.94■□□□□ 0.46
NXF1-216ENST00000533499 SLC35F6Q8N357 371 aa17.94■□□□□ 0.46
NXF1-216ENST00000533499 RTL3Q8N8U3 475 aaKnown RBP17.94■□□□□ 0.46
NXF1-216ENST00000533499 NETO2Q8NC67 525 aa17.94■□□□□ 0.46
NXF1-216ENST00000533499 FIBINQ8TAL6 211 aa17.94■□□□□ 0.46
NXF1-216ENST00000533499 MSANTD3Q96H12 275 aa17.94■□□□□ 0.46
NXF1-216ENST00000533499 FOXQ1Q9C009 403 aa17.94■□□□□ 0.46
NXF1-216ENST00000533499 CIPCQ9C0C6 399 aa17.94■□□□□ 0.46
NXF1-216ENST00000533499 GGA2Q9UJY4 613 aa17.94■□□□□ 0.46
NXF1-216ENST00000533499 PCDHA3Q9Y5H8 950 aa17.94■□□□□ 0.46
NXF1-216ENST00000533499 EGFP01133 1207 aa17.93■□□□□ 0.46
NXF1-216ENST00000533499 CISD3P0C7P0 127 aa17.93■□□□□ 0.46
NXF1-216ENST00000533499 MSNP26038 577 aaKnown RBP17.93■□□□□ 0.46
NXF1-216ENST00000533499 MZF1P28698 734 aaPredicted RBP17.93■□□□□ 0.46
NXF1-216ENST00000533499 HLA-FP30511 346 aa17.93■□□□□ 0.46
NXF1-216ENST00000533499 HTR7P34969 479 aa17.93■□□□□ 0.46
NXF1-216ENST00000533499 CETN2P41208 172 aa17.93■□□□□ 0.46
NXF1-216ENST00000533499 EIF2DP41214 584 aaKnown RBP17.93■□□□□ 0.46
NXF1-216ENST00000533499 GRIA2P42262 883 aa17.93■□□□□ 0.46
NXF1-216ENST00000533499 GNG11P61952 73 aa17.93■□□□□ 0.46
NXF1-216ENST00000533499 DYNLT1P63172 113 aa17.93■□□□□ 0.46
NXF1-216ENST00000533499 GEN1Q17RS7 908 aa17.93■□□□□ 0.46
NXF1-216ENST00000533499 ANKRD20A8PQ5CZ79 823 aa17.93■□□□□ 0.46
NXF1-216ENST00000533499 C1orf228Q6PIY5 440 aa17.93■□□□□ 0.46
NXF1-216ENST00000533499 TMCO3Q6UWJ1 677 aa17.93■□□□□ 0.46
NXF1-216ENST00000533499 MFSD7Q6UXD7 560 aa17.93■□□□□ 0.46
NXF1-216ENST00000533499 SFTPA1Q8IWL2 248 aa17.93■□□□□ 0.46
NXF1-216ENST00000533499 RCOR2Q8IZ40 523 aa17.93■□□□□ 0.46
NXF1-216ENST00000533499 RBM41Q96IZ5 413 aaKnown RBP17.93■□□□□ 0.46
NXF1-216ENST00000533499 CELF6Q96J87 481 aaKnown RBP17.93■□□□□ 0.46
NXF1-216ENST00000533499 PSMB7Q99436 277 aa17.93■□□□□ 0.46
NXF1-216ENST00000533499 COL25A1Q9BXS0 654 aaPredicted RBP17.93■□□□□ 0.46
NXF1-216ENST00000533499 NDFIP2Q9NV92 336 aa17.93■□□□□ 0.46
NXF1-216ENST00000533499 TMEM248Q9NWD8 314 aa17.93■□□□□ 0.46
NXF1-216ENST00000533499 VPS28Q9UK41 221 aa17.93■□□□□ 0.46
NXF1-216ENST00000533499 MFHAS1Q9Y4C4 1052 aa17.93■□□□□ 0.46
NXF1-216ENST00000533499 ATG2BQ96BY7 2078 aa17.93■□□□□ 0.46
NXF1-216ENST00000533499 BDP1A6H8Y1 2624 aa17.92■□□□□ 0.46
NXF1-216ENST00000533499 KANSL1LA0AUZ9 987 aa17.92■□□□□ 0.46
NXF1-216ENST00000533499 FAM170BA6NMN3 283 aa17.92■□□□□ 0.46
NXF1-216ENST00000533499 TNFRSF10AO00220 468 aa17.92■□□□□ 0.46
NXF1-216ENST00000533499 RAMP2O60895 175 aa17.92■□□□□ 0.46
NXF1-216ENST00000533499 PDGFBP01127 241 aaPredicted RBP17.92■□□□□ 0.46
NXF1-216ENST00000533499 POLR2EP19388 210 aaKnown RBP17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms