RNA–Protein interactions for RNA: ENST00000533078.5

CMTM1-216, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-216ENST00000533078 TULP2O00295 520 aa11.97□□□□□ -0.49
CMTM1-216ENST00000533078 TLX3O43711 291 aaPredicted RBP11.97□□□□□ -0.49
CMTM1-216ENST00000533078 RHOBTB3O94955 611 aa11.97□□□□□ -0.49
CMTM1-216ENST00000533078 IL1BP01584 269 aa11.97□□□□□ -0.49
CMTM1-216ENST00000533078 CMA1P23946 247 aa11.97□□□□□ -0.49
CMTM1-216ENST00000533078 TBXAS1P24557 533 aaPredicted RBP11.97□□□□□ -0.49
CMTM1-216ENST00000533078 SYKP43405 635 aa11.97□□□□□ -0.49
CMTM1-216ENST00000533078 SGSHP51688 502 aa11.97□□□□□ -0.49
CMTM1-216ENST00000533078 ADPRHP54922 357 aa11.97□□□□□ -0.49
CMTM1-216ENST00000533078 NXPH1P58417 271 aa11.97□□□□□ -0.49
CMTM1-216ENST00000533078 DAOAP59103 153 aa11.97□□□□□ -0.49
CMTM1-216ENST00000533078 ECT2LQ008S8 904 aa11.97□□□□□ -0.49
CMTM1-216ENST00000533078 E2F1Q01094 437 aa11.97□□□□□ -0.49
CMTM1-216ENST00000533078 OVGP1Q12889 678 aa11.97□□□□□ -0.49
CMTM1-216ENST00000533078 CUL2Q13617 745 aa11.97□□□□□ -0.49
CMTM1-216ENST00000533078 ELAVL3Q14576 367 aaKnown RBP11.97□□□□□ -0.49
CMTM1-216ENST00000533078 STAT4Q14765 748 aa11.97□□□□□ -0.49
CMTM1-216ENST00000533078 ARID5BQ14865 1188 aa11.97□□□□□ -0.49
CMTM1-216ENST00000533078 STILQ15468 1287 aa11.97□□□□□ -0.49
CMTM1-216ENST00000533078 EDRF1Q3B7T1 1238 aa11.97□□□□□ -0.49
CMTM1-216ENST00000533078 TAF1BQ53T94 588 aaPredicted RBP11.97□□□□□ -0.49
CMTM1-216ENST00000533078 NAPEPLDQ6IQ20 393 aa11.97□□□□□ -0.49
CMTM1-216ENST00000533078 FBXL19Q6PCT2 694 aa11.97□□□□□ -0.49
CMTM1-216ENST00000533078 BHLHA9Q7RTU4 235 aa11.97□□□□□ -0.49
CMTM1-216ENST00000533078 SCML4Q8N228 414 aa11.97□□□□□ -0.49
CMTM1-216ENST00000533078 MFSD2AQ8NA29 543 aa11.97□□□□□ -0.49
CMTM1-216ENST00000533078 UBA3Q8TBC4 463 aa11.97□□□□□ -0.49
CMTM1-216ENST00000533078 WFDC5Q8TCV5 224 aa11.97□□□□□ -0.49
CMTM1-216ENST00000533078 SEMA4DQ92854 862 aa11.97□□□□□ -0.49
CMTM1-216ENST00000533078 TRIM62Q9BVG3 475 aa11.97□□□□□ -0.49
CMTM1-216ENST00000533078 MTG2Q9H4K7 406 aa11.97□□□□□ -0.49
CMTM1-216ENST00000533078 EVA1BQ9NVM1 165 aa11.97□□□□□ -0.49
CMTM1-216ENST00000533078 TJP2Q9UDY2 1190 aa11.97□□□□□ -0.49
CMTM1-216ENST00000533078 SERGEFQ9UGK8 458 aa11.97□□□□□ -0.49
CMTM1-216ENST00000533078 ERVW-1Q9UQF0 538 aa11.97□□□□□ -0.49
CMTM1-216ENST00000533078 PTPRQQ9UMZ3 2332 aa11.97□□□□□ -0.49
CMTM1-216ENST00000533078 GOLGA6L7A0A1B0GV03 622 aa11.96□□□□□ -0.49
CMTM1-216ENST00000533078 SART1O43290 800 aaKnown RBP11.96□□□□□ -0.49
CMTM1-216ENST00000533078 BRINP1O60477 761 aa11.96□□□□□ -0.49
CMTM1-216ENST00000533078 FBXO21O94952 628 aa11.96□□□□□ -0.49
CMTM1-216ENST00000533078 APOEP02649 317 aa11.96□□□□□ -0.49
CMTM1-216ENST00000533078 LTFP02788 710 aa11.96□□□□□ -0.49
CMTM1-216ENST00000533078 WNT1P04628 370 aa11.96□□□□□ -0.49
CMTM1-216ENST00000533078 RXRGP48443 463 aa11.96□□□□□ -0.49
CMTM1-216ENST00000533078 UCNP55089 124 aa11.96□□□□□ -0.49
CMTM1-216ENST00000533078 CXADRP78310 365 aa11.96□□□□□ -0.49
CMTM1-216ENST00000533078 DAB2P98082 770 aa11.96□□□□□ -0.49
CMTM1-216ENST00000533078 SULT2A1Q06520 285 aa11.96□□□□□ -0.49
CMTM1-216ENST00000533078 CCDC173Q0VFZ6 552 aa11.96□□□□□ -0.49
CMTM1-216ENST00000533078 FAM133BQ5BKY9 247 aaKnown RBP11.96□□□□□ -0.49
CMTM1-216ENST00000533078 PITRM1Q5JRX3 1037 aa11.96□□□□□ -0.49
CMTM1-216ENST00000533078 C9orf64Q5T6V5 341 aa11.96□□□□□ -0.49
CMTM1-216ENST00000533078 FAM46CQ5VWP2 391 aa11.96□□□□□ -0.49
CMTM1-216ENST00000533078 IQCHQ86VS3 1027 aa11.96□□□□□ -0.49
CMTM1-216ENST00000533078 ZC3H3Q8IXZ2 948 aaKnown RBP11.96□□□□□ -0.49
CMTM1-216ENST00000533078 CACTIN-AS1Q8N1I8 211 aa11.96□□□□□ -0.49
CMTM1-216ENST00000533078 TSC1Q92574 1164 aa11.96□□□□□ -0.49
CMTM1-216ENST00000533078 PPP1R9BQ96SB3 815 aa11.96□□□□□ -0.49
CMTM1-216ENST00000533078 TSG101Q99816 390 aa11.96□□□□□ -0.49
CMTM1-216ENST00000533078 KDM4CQ9H3R0 1056 aa11.96□□□□□ -0.49
CMTM1-216ENST00000533078 RCOR1Q9UKL0 485 aa11.96□□□□□ -0.49
CMTM1-216ENST00000533078 DMTF1Q9Y222 760 aa11.96□□□□□ -0.49
CMTM1-216ENST00000533078 MGAQ8IWI9 3026 aa11.95□□□□□ -0.5
CMTM1-216ENST00000533078 ITIH6Q6UXX5 1313 aa11.95□□□□□ -0.5
CMTM1-216ENST00000533078 A0A1W2PR77 199 aa11.95□□□□□ -0.5
CMTM1-216ENST00000533078 TTC34A8MYJ7 566 aa11.95□□□□□ -0.5
CMTM1-216ENST00000533078 ERVH48-1M5A8F1 160 aa11.95□□□□□ -0.5
CMTM1-216ENST00000533078 O00370 1275 aa11.95□□□□□ -0.5
CMTM1-216ENST00000533078 SLC7A4O43246 635 aa11.95□□□□□ -0.5
CMTM1-216ENST00000533078 LUC7L3O95232 432 aaKnown RBP11.95□□□□□ -0.5
CMTM1-216ENST00000533078 MOCS2O96007 188 aaPredicted RBP11.95□□□□□ -0.5
CMTM1-216ENST00000533078 IGLV3-27P01718 113 aa11.95□□□□□ -0.5
CMTM1-216ENST00000533078 ALPPL2P10696 532 aa11.95□□□□□ -0.5
CMTM1-216ENST00000533078 PLA2G2AP14555 144 aa11.95□□□□□ -0.5
CMTM1-216ENST00000533078 MZF1P28698 734 aaPredicted RBP11.95□□□□□ -0.5
CMTM1-216ENST00000533078 SLC6A4P31645 630 aa11.95□□□□□ -0.5
CMTM1-216ENST00000533078 RGS7P49802 495 aa11.95□□□□□ -0.5
CMTM1-216ENST00000533078 OXCT1P55809 520 aa11.95□□□□□ -0.5
CMTM1-216ENST00000533078 CLDN6P56747 220 aa11.95□□□□□ -0.5
CMTM1-216ENST00000533078 PCBP4P57723 403 aaKnown RBP11.95□□□□□ -0.5
CMTM1-216ENST00000533078 RPS24P62847 133 aaKnown RBP11.95□□□□□ -0.5
CMTM1-216ENST00000533078 CFHR1Q03591 330 aa11.95□□□□□ -0.5
CMTM1-216ENST00000533078 DNM1Q05193 864 aaKnown RBP11.95□□□□□ -0.5
CMTM1-216ENST00000533078 NNTQ13423 1086 aa11.95□□□□□ -0.5
CMTM1-216ENST00000533078 SLC12A1Q13621 1099 aa11.95□□□□□ -0.5
CMTM1-216ENST00000533078 SHBQ15464 509 aa11.95□□□□□ -0.5
CMTM1-216ENST00000533078 TBC1D25Q3MII6 688 aa11.95□□□□□ -0.5
CMTM1-216ENST00000533078 SETMARQ53H47 684 aaPredicted RBP11.95□□□□□ -0.5
CMTM1-216ENST00000533078 LCLAT1Q6UWP7 414 aa11.95□□□□□ -0.5
CMTM1-216ENST00000533078 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.95□□□□□ -0.5
CMTM1-216ENST00000533078 HSCBQ8IWL3 235 aa11.95□□□□□ -0.5
CMTM1-216ENST00000533078 LSMEM2Q8N112 164 aa11.95□□□□□ -0.5
CMTM1-216ENST00000533078 STK40Q8N2I9 435 aa11.95□□□□□ -0.5
CMTM1-216ENST00000533078 ZNF248Q8NDW4 579 aa11.95□□□□□ -0.5
CMTM1-216ENST00000533078 MYO19Q96H55 970 aa11.95□□□□□ -0.5
CMTM1-216ENST00000533078 SPAG5Q96R06 1193 aa11.95□□□□□ -0.5
CMTM1-216ENST00000533078 SLC12A6Q9UHW9 1150 aa11.95□□□□□ -0.5
CMTM1-216ENST00000533078 TLR6Q9Y2C9 796 aa11.95□□□□□ -0.5
CMTM1-216ENST00000533078 RAI2Q9Y5P3 530 aa11.95□□□□□ -0.5
CMTM1-216ENST00000533078 MYLKQ15746 1914 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms