RNA–Protein interactions for RNA: ENST00000532652.1

AP004550.1-201, humanhuman

TSL 3 BASIC

Gene AP004550.1, Length 514 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004550.1-201ENST00000532652 FAM129BQ96TA1 746 aa13.09□□□□□ -0.31
AP004550.1-201ENST00000532652 CLMPQ9H6B4 373 aa13.09□□□□□ -0.31
AP004550.1-201ENST00000532652 LRRC4Q9HBW1 653 aa13.09□□□□□ -0.31
AP004550.1-201ENST00000532652 EXOC1Q9NV70 894 aa13.09□□□□□ -0.31
AP004550.1-201ENST00000532652 DACH1Q9UI36 760 aa13.09□□□□□ -0.31
AP004550.1-201ENST00000532652 LRRK2Q5S007 2527 aa13.09□□□□□ -0.31
AP004550.1-201ENST00000532652 TBC1D3DA0A087WVF3 549 aa13.08□□□□□ -0.32
AP004550.1-201ENST00000532652 TBC1D3IA0A087WXS9 549 aa13.08□□□□□ -0.32
AP004550.1-201ENST00000532652 TBC1D3EA0A087X179 549 aa13.08□□□□□ -0.32
AP004550.1-201ENST00000532652 TBC1D3KA0A087X1G2 549 aa13.08□□□□□ -0.32
AP004550.1-201ENST00000532652 EDDM13A0A1B0GTR0 161 aa13.08□□□□□ -0.32
AP004550.1-201ENST00000532652 TARSL2A2RTX5 802 aaKnown RBP13.08□□□□□ -0.32
AP004550.1-201ENST00000532652 TBC1D3FA6NER0 549 aaPredicted RBP13.08□□□□□ -0.32
AP004550.1-201ENST00000532652 B8ZZF3 427 aa13.08□□□□□ -0.32
AP004550.1-201ENST00000532652 TBC1D3LB9A6J9 549 aa13.08□□□□□ -0.32
AP004550.1-201ENST00000532652 XPO1O14980 1071 aaKnown RBP13.08□□□□□ -0.32
AP004550.1-201ENST00000532652 LATO43561 262 aa13.08□□□□□ -0.32
AP004550.1-201ENST00000532652 SIGLEC6O43699 453 aa13.08□□□□□ -0.32
AP004550.1-201ENST00000532652 CALUO43852 315 aaPredicted RBP13.08□□□□□ -0.32
AP004550.1-201ENST00000532652 YEATS4O95619 227 aa13.08□□□□□ -0.32
AP004550.1-201ENST00000532652 TBC1D3HP0C7X1 549 aa13.08□□□□□ -0.32
AP004550.1-201ENST00000532652 GOT1P17174 413 aa13.08□□□□□ -0.32
AP004550.1-201ENST00000532652 CTSOP43234 321 aaPredicted RBP13.08□□□□□ -0.32
AP004550.1-201ENST00000532652 E2F1Q01094 437 aa13.08□□□□□ -0.32
AP004550.1-201ENST00000532652 LY6DQ14210 128 aa13.08□□□□□ -0.32
AP004550.1-201ENST00000532652 KMT5BQ4FZB7 885 aa13.08□□□□□ -0.32
AP004550.1-201ENST00000532652 TBC1D3GQ6DHY5 549 aa13.08□□□□□ -0.32
AP004550.1-201ENST00000532652 TBC1D3CQ6IPX1 549 aa13.08□□□□□ -0.32
AP004550.1-201ENST00000532652 NAPEPLDQ6IQ20 393 aa13.08□□□□□ -0.32
AP004550.1-201ENST00000532652 INTS8Q75QN2 995 aaKnown RBP13.08□□□□□ -0.32
AP004550.1-201ENST00000532652 TBC1D3Q8IZP1 549 aaPredicted RBP13.08□□□□□ -0.32
AP004550.1-201ENST00000532652 TTC39CQ8N584 583 aa13.08□□□□□ -0.32
AP004550.1-201ENST00000532652 KDM1BQ8NB78 822 aa13.08□□□□□ -0.32
AP004550.1-201ENST00000532652 SEMA4DQ92854 862 aa13.08□□□□□ -0.32
AP004550.1-201ENST00000532652 TATDN2Q93075 761 aa13.08□□□□□ -0.32
AP004550.1-201ENST00000532652 HIC2Q96JB3 615 aa13.08□□□□□ -0.32
AP004550.1-201ENST00000532652 ZNF578Q96N58 590 aaPredicted RBP13.08□□□□□ -0.32
AP004550.1-201ENST00000532652 ZNF396Q96N95 335 aaPredicted RBP13.08□□□□□ -0.32
AP004550.1-201ENST00000532652 IPO9Q96P70 1041 aaKnown RBP13.08□□□□□ -0.32
AP004550.1-201ENST00000532652 IRX2Q9BZI1 471 aaPredicted RBP13.08□□□□□ -0.32
AP004550.1-201ENST00000532652 UPF2Q9HAU5 1272 aaKnown RBP13.08□□□□□ -0.32
AP004550.1-201ENST00000532652 ABCC13Q9NSE7 274 aa13.08□□□□□ -0.32
AP004550.1-201ENST00000532652 TSPAN16Q9UKR8 245 aa13.08□□□□□ -0.32
AP004550.1-201ENST00000532652 TPX2Q9ULW0 747 aaKnown RBP13.08□□□□□ -0.32
AP004550.1-201ENST00000532652 ERVW-1Q9UQF0 538 aa13.08□□□□□ -0.32
AP004550.1-201ENST00000532652 TRAF3IP3Q9Y228 551 aa13.08□□□□□ -0.32
AP004550.1-201ENST00000532652 RP1L1Q8IWN7 2480 aaPredicted RBP13.07□□□□□ -0.32
AP004550.1-201ENST00000532652 TRIM38O00635 465 aa13.07□□□□□ -0.32
AP004550.1-201ENST00000532652 IRAK2O43187 625 aa13.07□□□□□ -0.32
AP004550.1-201ENST00000532652 ACSL4O60488 711 aa13.07□□□□□ -0.32
AP004550.1-201ENST00000532652 ADH1BP00325 375 aa13.07□□□□□ -0.32
AP004550.1-201ENST00000532652 IGLV3-27P01718 113 aa13.07□□□□□ -0.32
AP004550.1-201ENST00000532652 MPOP05164 745 aa13.07□□□□□ -0.32
AP004550.1-201ENST00000532652 SRPRAP08240 638 aaKnown RBP13.07□□□□□ -0.32
AP004550.1-201ENST00000532652 KRT13P13646 458 aa13.07□□□□□ -0.32
AP004550.1-201ENST00000532652 C5AR1P21730 350 aa13.07□□□□□ -0.32
AP004550.1-201ENST00000532652 NR2F2P24468 414 aa13.07□□□□□ -0.32
AP004550.1-201ENST00000532652 SLC11A2P49281 568 aa13.07□□□□□ -0.32
AP004550.1-201ENST00000532652 UCNP55089 124 aa13.07□□□□□ -0.32
AP004550.1-201ENST00000532652 RPS24P62847 133 aaKnown RBP13.07□□□□□ -0.32
AP004550.1-201ENST00000532652 DAB2P98082 770 aa13.07□□□□□ -0.32
AP004550.1-201ENST00000532652 BST2Q10589 180 aaKnown RBP13.07□□□□□ -0.32
AP004550.1-201ENST00000532652 FSCBQ5H9T9 825 aa13.07□□□□□ -0.32
AP004550.1-201ENST00000532652 NUGGCQ68CJ6 796 aa13.07□□□□□ -0.32
AP004550.1-201ENST00000532652 MSANTD2Q6P1R3 559 aa13.07□□□□□ -0.32
AP004550.1-201ENST00000532652 MMS22LQ6ZRQ5 1243 aa13.07□□□□□ -0.32
AP004550.1-201ENST00000532652 IQCHQ86VS3 1027 aa13.07□□□□□ -0.32
AP004550.1-201ENST00000532652 CEP57L1Q8IYX8 460 aa13.07□□□□□ -0.32
AP004550.1-201ENST00000532652 SIX6OS1Q8N1H7 587 aa13.07□□□□□ -0.32
AP004550.1-201ENST00000532652 STK40Q8N2I9 435 aa13.07□□□□□ -0.32
AP004550.1-201ENST00000532652 CARNMT1Q8N4J0 409 aa13.07□□□□□ -0.32
AP004550.1-201ENST00000532652 HJURPQ8NCD3 748 aaPredicted RBP13.07□□□□□ -0.32
AP004550.1-201ENST00000532652 TTC9Q92623 222 aa13.07□□□□□ -0.32
AP004550.1-201ENST00000532652 PTPRN2Q92932 1015 aa13.07□□□□□ -0.32
AP004550.1-201ENST00000532652 MYEOVQ96EZ4 313 aa13.07□□□□□ -0.32
AP004550.1-201ENST00000532652 PRICKLE1Q96MT3 831 aaPredicted RBP13.07□□□□□ -0.32
AP004550.1-201ENST00000532652 TMEM8AQ9HCN3 771 aa13.07□□□□□ -0.32
AP004550.1-201ENST00000532652 FAM13BQ9NYF5 915 aa13.07□□□□□ -0.32
AP004550.1-201ENST00000532652 ARHGAP20Q9P2F6 1191 aa13.07□□□□□ -0.32
AP004550.1-201ENST00000532652 SERTAD1Q9UHV2 236 aa13.07□□□□□ -0.32
AP004550.1-201ENST00000532652 SLCO3A1Q9UIG8 710 aa13.07□□□□□ -0.32
AP004550.1-201ENST00000532652 ITIH6Q6UXX5 1313 aa13.07□□□□□ -0.32
AP004550.1-201ENST00000532652 UBR5O95071 2799 aaPredicted RBP13.07□□□□□ -0.32
AP004550.1-201ENST00000532652 TYW5A2RUC4 315 aaKnown RBP13.06□□□□□ -0.32
AP004550.1-201ENST00000532652 MAGEC1O60732 1142 aa13.06□□□□□ -0.32
AP004550.1-201ENST00000532652 IL1BP01584 269 aa13.06□□□□□ -0.32
AP004550.1-201ENST00000532652 MAT2AP31153 395 aaKnown RBP13.06□□□□□ -0.32
AP004550.1-201ENST00000532652 DRD3P35462 400 aa13.06□□□□□ -0.32
AP004550.1-201ENST00000532652 DAOAP59103 153 aa13.06□□□□□ -0.32
AP004550.1-201ENST00000532652 GABREP78334 506 aa13.06□□□□□ -0.32
AP004550.1-201ENST00000532652 ZNF211Q13398 564 aaPredicted RBP13.06□□□□□ -0.32
AP004550.1-201ENST00000532652 PITRM1Q5JRX3 1037 aa13.06□□□□□ -0.32
AP004550.1-201ENST00000532652 CDCP2Q5VXM1 449 aa13.06□□□□□ -0.32
AP004550.1-201ENST00000532652 RESP18Q5W5W9 173 aa13.06□□□□□ -0.32
AP004550.1-201ENST00000532652 KRT39Q6A163 491 aa13.06□□□□□ -0.32
AP004550.1-201ENST00000532652 NADSYN1Q6IA69 706 aa13.06□□□□□ -0.32
AP004550.1-201ENST00000532652 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.06□□□□□ -0.32
AP004550.1-201ENST00000532652 PRPF39Q86UA1 669 aaKnown RBP13.06□□□□□ -0.32
AP004550.1-201ENST00000532652 UNC45BQ8IWX7 931 aa13.06□□□□□ -0.32
AP004550.1-201ENST00000532652 FAM186BQ8IYM0 893 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms