RNA–Protein interactions for RNA: ENST00000532149.1

CHD7-211, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-211ENST00000532149 ERICH4A6NGS2 130 aa12.6□□□□□ -0.39
CHD7-211ENST00000532149 GOLGA8MH3BSY2 632 aa12.6□□□□□ -0.39
CHD7-211ENST00000532149 CACNG3O60359 315 aa12.6□□□□□ -0.39
CHD7-211ENST00000532149 AP2A1O95782 977 aa12.6□□□□□ -0.39
CHD7-211ENST00000532149 MT-ND3P03897 115 aa12.6□□□□□ -0.39
CHD7-211ENST00000532149 ITGB1P05556 798 aa12.6□□□□□ -0.39
CHD7-211ENST00000532149 CPB1P15086 417 aa12.6□□□□□ -0.39
CHD7-211ENST00000532149 RHOQP17081 205 aa12.6□□□□□ -0.39
CHD7-211ENST00000532149 YBEYP58557 167 aaPredicted RBP12.6□□□□□ -0.39
CHD7-211ENST00000532149 LAMB3Q13751 1172 aa12.6□□□□□ -0.39
CHD7-211ENST00000532149 BTG3Q14201 252 aaPredicted RBP12.6□□□□□ -0.39
CHD7-211ENST00000532149 TMED2Q15363 201 aa12.6□□□□□ -0.39
CHD7-211ENST00000532149 SKIDA1Q1XH10 827 aa12.6□□□□□ -0.39
CHD7-211ENST00000532149 SPANXN3Q5MJ09 141 aa12.6□□□□□ -0.39
CHD7-211ENST00000532149 MANEALQ5VSG8 457 aa12.6□□□□□ -0.39
CHD7-211ENST00000532149 TIFABQ6ZNK6 161 aa12.6□□□□□ -0.39
CHD7-211ENST00000532149 PRUNE1Q86TP1 453 aa12.6□□□□□ -0.39
CHD7-211ENST00000532149 SRRM1Q8IYB3 904 aaKnown RBP12.6□□□□□ -0.39
CHD7-211ENST00000532149 PYROXD2Q8N2H3 581 aa12.6□□□□□ -0.39
CHD7-211ENST00000532149 STKLD1Q8NE28 680 aa12.6□□□□□ -0.39
CHD7-211ENST00000532149 UHMK1Q8TAS1 419 aaKnown RBP12.6□□□□□ -0.39
CHD7-211ENST00000532149 HASPINQ8TF76 798 aa12.6□□□□□ -0.39
CHD7-211ENST00000532149 NSMCE1Q8WV22 266 aa12.6□□□□□ -0.39
CHD7-211ENST00000532149 NDRG1Q92597 394 aaKnown RBP12.6□□□□□ -0.39
CHD7-211ENST00000532149 EDEM1Q92611 657 aa12.6□□□□□ -0.39
CHD7-211ENST00000532149 STAMBPL1Q96FJ0 436 aa12.6□□□□□ -0.39
CHD7-211ENST00000532149 SIGLEC10Q96LC7 697 aa12.6□□□□□ -0.39
CHD7-211ENST00000532149 TEKT5Q96M29 485 aa12.6□□□□□ -0.39
CHD7-211ENST00000532149 ZNF317Q96PQ6 595 aaPredicted RBP12.6□□□□□ -0.39
CHD7-211ENST00000532149 PAFAH2Q99487 392 aa12.6□□□□□ -0.39
CHD7-211ENST00000532149 ZBED2Q9BTP6 218 aa12.6□□□□□ -0.39
CHD7-211ENST00000532149 IL22Q9GZX6 179 aa12.6□□□□□ -0.39
CHD7-211ENST00000532149 GBA3Q9H227 469 aa12.6□□□□□ -0.39
CHD7-211ENST00000532149 VPS11Q9H270 941 aa12.6□□□□□ -0.39
CHD7-211ENST00000532149 TMEM30AQ9NV96 361 aa12.6□□□□□ -0.39
CHD7-211ENST00000532149 DNAJC17Q9NVM6 304 aaKnown RBP12.6□□□□□ -0.39
CHD7-211ENST00000532149 PLA2G2EQ9NZK7 142 aa12.6□□□□□ -0.39
CHD7-211ENST00000532149 COX16Q9P0S2 106 aa12.6□□□□□ -0.39
CHD7-211ENST00000532149 PRG3Q9Y2Y8 225 aaPredicted RBP12.6□□□□□ -0.39
CHD7-211ENST00000532149 MATN3O15232 486 aa12.59□□□□□ -0.39
CHD7-211ENST00000532149 METTL18O95568 372 aa12.59□□□□□ -0.39
CHD7-211ENST00000532149 EFEMP2O95967 443 aa12.59□□□□□ -0.39
CHD7-211ENST00000532149 ZDHHC11BP0C7U3 371 aa12.59□□□□□ -0.39
CHD7-211ENST00000532149 CSH1P0DML2 217 aa12.59□□□□□ -0.39
CHD7-211ENST00000532149 CSH2P0DML3 217 aa12.59□□□□□ -0.39
CHD7-211ENST00000532149 SSTR1P30872 391 aa12.59□□□□□ -0.39
CHD7-211ENST00000532149 POLD2P49005 469 aa12.59□□□□□ -0.39
CHD7-211ENST00000532149 SLC11A1P49279 550 aa12.59□□□□□ -0.39
CHD7-211ENST00000532149 TUBP50607 506 aa12.59□□□□□ -0.39
CHD7-211ENST00000532149 RENBPP51606 427 aa12.59□□□□□ -0.39
CHD7-211ENST00000532149 TBX4P57082 545 aa12.59□□□□□ -0.39
CHD7-211ENST00000532149 TNK2Q07912 1038 aa12.59□□□□□ -0.39
CHD7-211ENST00000532149 WASHC5Q12768 1159 aa12.59□□□□□ -0.39
CHD7-211ENST00000532149 GPNMBQ14956 572 aa12.59□□□□□ -0.39
CHD7-211ENST00000532149 MSS51Q4VC12 460 aa12.59□□□□□ -0.39
CHD7-211ENST00000532149 SCD5Q86SK9 330 aa12.59□□□□□ -0.39
CHD7-211ENST00000532149 LCA5Q86VQ0 697 aa12.59□□□□□ -0.39
CHD7-211ENST00000532149 ANKMY2Q8IV38 441 aa12.59□□□□□ -0.39
CHD7-211ENST00000532149 ZNF567Q8N184 647 aa12.59□□□□□ -0.39
CHD7-211ENST00000532149 UMODL1-AS1Q8N2C9 162 aa12.59□□□□□ -0.39
CHD7-211ENST00000532149 ATPAF2Q8N5M1 289 aa12.59□□□□□ -0.39
CHD7-211ENST00000532149 RTL3Q8N8U3 475 aaKnown RBP12.59□□□□□ -0.39
CHD7-211ENST00000532149 CCDC197Q8NCU1 140 aa12.59□□□□□ -0.39
CHD7-211ENST00000532149 ATP2A3Q93084 1043 aa12.59□□□□□ -0.39
CHD7-211ENST00000532149 FBXO32Q969P5 355 aa12.59□□□□□ -0.39
CHD7-211ENST00000532149 CABS1Q96KC9 395 aa12.59□□□□□ -0.39
CHD7-211ENST00000532149 FCRL2Q96LA5 508 aaPredicted RBP12.59□□□□□ -0.39
CHD7-211ENST00000532149 PWWP2AQ96N64 755 aa12.59□□□□□ -0.39
CHD7-211ENST00000532149 LGMNQ99538 433 aa12.59□□□□□ -0.39
CHD7-211ENST00000532149 DDX50Q9BQ39 737 aaKnown RBP12.59□□□□□ -0.39
CHD7-211ENST00000532149 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.59□□□□□ -0.39
CHD7-211ENST00000532149 MOCS1Q9NZB8 636 aa12.59□□□□□ -0.39
CHD7-211ENST00000532149 MTRRQ9UBK8 725 aa12.59□□□□□ -0.39
CHD7-211ENST00000532149 UXTQ9UBK9 157 aaPredicted RBP12.59□□□□□ -0.39
CHD7-211ENST00000532149 CACNG4Q9UBN1 327 aa12.59□□□□□ -0.39
CHD7-211ENST00000532149 DNAJB4Q9UDY4 337 aa12.59□□□□□ -0.39
CHD7-211ENST00000532149 AFF4Q9UHB7 1163 aaKnown RBP12.59□□□□□ -0.39
CHD7-211ENST00000532149 CHMP2BQ9UQN3 213 aa12.59□□□□□ -0.39
CHD7-211ENST00000532149 IGLV3-10A0A075B6K4 115 aa12.58□□□□□ -0.4
CHD7-211ENST00000532149 TCRBV7S3A2A0A539 114 aa12.58□□□□□ -0.4
CHD7-211ENST00000532149 MTMR11A4FU01 709 aa12.58□□□□□ -0.4
CHD7-211ENST00000532149 ARHGAP42A6NI28 874 aa12.58□□□□□ -0.4
CHD7-211ENST00000532149 FAM159BA6NKW6 160 aa12.58□□□□□ -0.4
CHD7-211ENST00000532149 TBKBP1A7MCY6 615 aa12.58□□□□□ -0.4
CHD7-211ENST00000532149 PQBP1O60828 265 aaKnown RBP12.58□□□□□ -0.4
CHD7-211ENST00000532149 PAGE1O75459 146 aa12.58□□□□□ -0.4
CHD7-211ENST00000532149 BAIAP3O94812 1187 aa12.58□□□□□ -0.4
CHD7-211ENST00000532149 AMHP03971 560 aa12.58□□□□□ -0.4
CHD7-211ENST00000532149 LAG3P18627 525 aa12.58□□□□□ -0.4
CHD7-211ENST00000532149 IGFBP6P24592 240 aaPredicted RBP12.58□□□□□ -0.4
CHD7-211ENST00000532149 DNAJB1P25685 340 aa12.58□□□□□ -0.4
CHD7-211ENST00000532149 PTPN3P26045 913 aa12.58□□□□□ -0.4
CHD7-211ENST00000532149 GCAP28676 217 aa12.58□□□□□ -0.4
CHD7-211ENST00000532149 PPM1AP35813 382 aa12.58□□□□□ -0.4
CHD7-211ENST00000532149 CCT5P48643 541 aa12.58□□□□□ -0.4
CHD7-211ENST00000532149 MAPKAPK2P49137 400 aa12.58□□□□□ -0.4
CHD7-211ENST00000532149 GEMP55040 296 aa12.58□□□□□ -0.4
CHD7-211ENST00000532149 PITX1P78337 314 aaPredicted RBP12.58□□□□□ -0.4
CHD7-211ENST00000532149 SLC18A2Q05940 514 aa12.58□□□□□ -0.4
CHD7-211ENST00000532149 PLD1Q13393 1074 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms