RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 SHC2P98077 582 aa4.95□□□□□ -1.62
PTPRK-220ENST00000531466 ATP1A4Q13733 1029 aa4.95□□□□□ -1.62
PTPRK-220ENST00000531466 RAP1GAP2Q684P5 730 aa4.95□□□□□ -1.62
PTPRK-220ENST00000531466 Q6ZSV7 163 aa4.95□□□□□ -1.62
PTPRK-220ENST00000531466 ADGRF3Q8IZF5 1079 aa4.95□□□□□ -1.62
PTPRK-220ENST00000531466 CLIP4Q8N3C7 705 aa4.95□□□□□ -1.62
PTPRK-220ENST00000531466 SLC25A41Q8N5S1 370 aa4.95□□□□□ -1.62
PTPRK-220ENST00000531466 IP6K1Q92551 441 aa4.95□□□□□ -1.62
PTPRK-220ENST00000531466 TCF7L2Q9NQB0 619 aa4.95□□□□□ -1.62
PTPRK-220ENST00000531466 SNX13Q9Y5W8 968 aa4.95□□□□□ -1.62
PTPRK-220ENST00000531466 SLC16A5O15375 505 aa4.94□□□□□ -1.62
PTPRK-220ENST00000531466 ZBED1O96006 694 aa4.94□□□□□ -1.62
PTPRK-220ENST00000531466 ZNF12P17014 697 aa4.94□□□□□ -1.62
PTPRK-220ENST00000531466 ARHGAP15Q53QZ3 475 aa4.94□□□□□ -1.62
PTPRK-220ENST00000531466 FSCBQ5H9T9 825 aa4.94□□□□□ -1.62
PTPRK-220ENST00000531466 C10orf76Q5T2E6 689 aa4.94□□□□□ -1.62
PTPRK-220ENST00000531466 FAM102BQ5T8I3 360 aa4.94□□□□□ -1.62
PTPRK-220ENST00000531466 WBP2NLQ6ICG8 309 aa4.94□□□□□ -1.62
PTPRK-220ENST00000531466 FJX1Q86VR8 437 aa4.94□□□□□ -1.62
PTPRK-220ENST00000531466 FAM217AQ8IXS0 508 aa4.94□□□□□ -1.62
PTPRK-220ENST00000531466 EXD3Q8N9H8 876 aa4.94□□□□□ -1.62
PTPRK-220ENST00000531466 TMED6Q8WW62 240 aa4.94□□□□□ -1.62
PTPRK-220ENST00000531466 NODALQ96S42 347 aa4.94□□□□□ -1.62
PTPRK-220ENST00000531466 UNKQ9C0B0 810 aaKnown RBP4.94□□□□□ -1.62
PTPRK-220ENST00000531466 PNRC2Q9NPJ4 139 aaKnown RBP4.94□□□□□ -1.62
PTPRK-220ENST00000531466 TNFSF13BQ9Y275 285 aa4.94□□□□□ -1.62
PTPRK-220ENST00000531466 PCDHB7Q9Y5E2 793 aa4.94□□□□□ -1.62
PTPRK-220ENST00000531466 PCDHGB6Q9Y5F9 930 aa4.94□□□□□ -1.62
PTPRK-220ENST00000531466 LOC102724159A0A0B4J2E5 919 aa4.93□□□□□ -1.62
PTPRK-220ENST00000531466 IGLV2-11P01706 119 aa4.93□□□□□ -1.62
PTPRK-220ENST00000531466 HRGP04196 525 aa4.93□□□□□ -1.62
PTPRK-220ENST00000531466 CHRNB2P17787 502 aa4.93□□□□□ -1.62
PTPRK-220ENST00000531466 POU3F1Q03052 451 aaPredicted RBP4.93□□□□□ -1.62
PTPRK-220ENST00000531466 PLCB4Q15147 1175 aa4.93□□□□□ -1.62
PTPRK-220ENST00000531466 PWP2Q15269 919 aaKnown RBP4.93□□□□□ -1.62
PTPRK-220ENST00000531466 TDRD12Q587J7 1177 aaKnown RBP4.93□□□□□ -1.62
PTPRK-220ENST00000531466 KLHDC7AQ5VTJ3 777 aa4.93□□□□□ -1.62
PTPRK-220ENST00000531466 KIAA0408Q6ZU52 694 aa4.93□□□□□ -1.62
PTPRK-220ENST00000531466 ZNF367Q7RTV3 350 aa4.93□□□□□ -1.62
PTPRK-220ENST00000531466 RAVER1Q8IY67 606 aaKnown RBP4.93□□□□□ -1.62
PTPRK-220ENST00000531466 HES6Q96HZ4 224 aa4.93□□□□□ -1.62
PTPRK-220ENST00000531466 APOL5Q9BWW9 433 aa4.93□□□□□ -1.62
PTPRK-220ENST00000531466 MAGEB5Q9BZ81 275 aa4.93□□□□□ -1.62
PTPRK-220ENST00000531466 PCDHAC1Q9H158 963 aa4.93□□□□□ -1.62
PTPRK-220ENST00000531466 DDX31Q9H8H2 851 aaKnown RBP4.93□□□□□ -1.62
PTPRK-220ENST00000531466 PNPLA8Q9NP80 782 aa4.93□□□□□ -1.62
PTPRK-220ENST00000531466 FBXO4Q9UKT5 387 aa4.93□□□□□ -1.62
PTPRK-220ENST00000531466 ZMYND8Q9ULU4 1186 aaPredicted RBP4.93□□□□□ -1.62
PTPRK-220ENST00000531466 CORO2BQ9UQ03 480 aa4.93□□□□□ -1.62
PTPRK-220ENST00000531466 PRR23AA6NEV1 266 aa4.92□□□□□ -1.62
PTPRK-220ENST00000531466 NPC1O15118 1278 aa4.92□□□□□ -1.62
PTPRK-220ENST00000531466 BUB3O43684 328 aa4.92□□□□□ -1.62
PTPRK-220ENST00000531466 PECAM1P16284 738 aaPredicted RBP4.92□□□□□ -1.62
PTPRK-220ENST00000531466 RPL17P18621 184 aaKnown RBP4.92□□□□□ -1.62
PTPRK-220ENST00000531466 DAG1Q14118 895 aa4.92□□□□□ -1.62
PTPRK-220ENST00000531466 C8orf82Q6P1X6 216 aaPredicted RBP4.92□□□□□ -1.62
PTPRK-220ENST00000531466 MEX3BQ6ZN04 569 aaKnown RBP4.92□□□□□ -1.62
PTPRK-220ENST00000531466 CAMK1DQ8IU85 385 aa4.92□□□□□ -1.62
PTPRK-220ENST00000531466 CCDC150Q8NCX0 1101 aa4.92□□□□□ -1.62
PTPRK-220ENST00000531466 APOLD1Q96LR9 279 aa4.92□□□□□ -1.62
PTPRK-220ENST00000531466 ADAD1Q96M93 576 aaKnown RBP4.92□□□□□ -1.62
PTPRK-220ENST00000531466 BTBD1Q9H0C5 482 aa4.92□□□□□ -1.62
PTPRK-220ENST00000531466 OSBPL5Q9H0X9 879 aaPredicted RBP4.92□□□□□ -1.62
PTPRK-220ENST00000531466 ZNF304Q9HCX3 659 aa4.92□□□□□ -1.62
PTPRK-220ENST00000531466 UBE2J1Q9Y385 318 aaPredicted RBP4.92□□□□□ -1.62
PTPRK-220ENST00000531466 LMTK3Q96Q04 1460 aa4.92□□□□□ -1.62
PTPRK-220ENST00000531466 OR2W5A6NFC9 320 aa4.91□□□□□ -1.62
PTPRK-220ENST00000531466 CLCA1A8K7I4 914 aa4.91□□□□□ -1.62
PTPRK-220ENST00000531466 MS4A18H0YCH9 400 aa4.91□□□□□ -1.62
PTPRK-220ENST00000531466 AREL1O15033 823 aa4.91□□□□□ -1.62
PTPRK-220ENST00000531466 VIPP01282 170 aa4.91□□□□□ -1.62
PTPRK-220ENST00000531466 SP1P08047 785 aa4.91□□□□□ -1.62
PTPRK-220ENST00000531466 ALDOCP09972 364 aaKnown RBP4.91□□□□□ -1.62
PTPRK-220ENST00000531466 TNFSF8P32971 234 aa4.91□□□□□ -1.62
PTPRK-220ENST00000531466 SLC16A2P36021 539 aa4.91□□□□□ -1.62
PTPRK-220ENST00000531466 ANAPC15P60006 121 aa4.91□□□□□ -1.62
PTPRK-220ENST00000531466 GRSF1Q12849 480 aaKnown RBP eCLIP4.91□□□□□ -1.62
PTPRK-220ENST00000531466 SLC39A14Q15043 492 aa4.91□□□□□ -1.62
PTPRK-220ENST00000531466 MSANTD2Q6P1R3 559 aa4.91□□□□□ -1.62
PTPRK-220ENST00000531466 WDR93Q6P2C0 686 aa4.91□□□□□ -1.62
PTPRK-220ENST00000531466 USP17L6PQ6QN14 398 aa4.91□□□□□ -1.62
PTPRK-220ENST00000531466 CHST15Q7LFX5 561 aaPredicted RBP4.91□□□□□ -1.62
PTPRK-220ENST00000531466 ATP11CQ8NB49 1132 aa4.91□□□□□ -1.62
PTPRK-220ENST00000531466 KDM1BQ8NB78 822 aa4.91□□□□□ -1.62
PTPRK-220ENST00000531466 ADPRHL1Q8NDY3 354 aa4.91□□□□□ -1.62
PTPRK-220ENST00000531466 OR14A16Q8NHC5 309 aa4.91□□□□□ -1.62
PTPRK-220ENST00000531466 WBP2Q969T9 261 aa4.91□□□□□ -1.62
PTPRK-220ENST00000531466 DUX5Q96PT3 197 aa4.91□□□□□ -1.62
PTPRK-220ENST00000531466 NUDT22Q9BRQ3 303 aa4.91□□□□□ -1.62
PTPRK-220ENST00000531466 B3GNT4Q9C0J1 378 aa4.91□□□□□ -1.62
PTPRK-220ENST00000531466 SFXN1Q9H9B4 322 aa4.91□□□□□ -1.62
PTPRK-220ENST00000531466 SDF2L1Q9HCN8 221 aa4.91□□□□□ -1.62
PTPRK-220ENST00000531466 TXNRD2Q9NNW7 524 aa4.91□□□□□ -1.62
PTPRK-220ENST00000531466 PRDM11Q9NQV5 511 aa4.91□□□□□ -1.62
PTPRK-220ENST00000531466 VWA5AO00534 786 aa4.9□□□□□ -1.63
PTPRK-220ENST00000531466 KRT36O76013 467 aa4.9□□□□□ -1.63
PTPRK-220ENST00000531466 SCGB1D2O95969 90 aa4.9□□□□□ -1.63
PTPRK-220ENST00000531466 LCKP06239 509 aa4.9□□□□□ -1.63
PTPRK-220ENST00000531466 SNRNP70P08621 437 aaKnown RBP4.9□□□□□ -1.63
PTPRK-220ENST00000531466 SRGAP2BP0DMP2 458 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms