RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 ABCG4Q9H172 646 aa9.58□□□□□ -0.88
NEDD8-206ENST00000531430 CPNE5Q9HCH3 593 aa9.58□□□□□ -0.88
NEDD8-206ENST00000531430 ZNF462Q96JM2 2506 aa9.58□□□□□ -0.88
NEDD8-206ENST00000531430 ASH1LQ9NR48 2969 aaKnown RBP9.58□□□□□ -0.88
NEDD8-206ENST00000531430 MYLKQ15746 1914 aa9.58□□□□□ -0.88
NEDD8-206ENST00000531430 PTPRQQ9UMZ3 2332 aa9.57□□□□□ -0.88
NEDD8-206ENST00000531430 PLXNA2O75051 1894 aa9.57□□□□□ -0.88
NEDD8-206ENST00000531430 EDDM13A0A1B0GTR0 161 aa9.57□□□□□ -0.88
NEDD8-206ENST00000531430 A0A1W2PR77 199 aa9.57□□□□□ -0.88
NEDD8-206ENST00000531430 TARSL2A2RTX5 802 aaKnown RBP9.57□□□□□ -0.88
NEDD8-206ENST00000531430 FFAR2O15552 330 aa9.57□□□□□ -0.88
NEDD8-206ENST00000531430 KLK10O43240 276 aa9.57□□□□□ -0.88
NEDD8-206ENST00000531430 SIGLEC6O43699 453 aa9.57□□□□□ -0.88
NEDD8-206ENST00000531430 MYF5P13349 255 aa9.57□□□□□ -0.88
NEDD8-206ENST00000531430 CCR5P51681 352 aa9.57□□□□□ -0.88
NEDD8-206ENST00000531430 ECT2LQ008S8 904 aa9.57□□□□□ -0.88
NEDD8-206ENST00000531430 E2F1Q01094 437 aa9.57□□□□□ -0.88
NEDD8-206ENST00000531430 INSM1Q01101 510 aaPredicted RBP9.57□□□□□ -0.88
NEDD8-206ENST00000531430 TLE3Q04726 772 aa9.57□□□□□ -0.88
NEDD8-206ENST00000531430 BST2Q10589 180 aaKnown RBP9.57□□□□□ -0.88
NEDD8-206ENST00000531430 ILKQ13418 452 aa9.57□□□□□ -0.88
NEDD8-206ENST00000531430 LY6DQ14210 128 aa9.57□□□□□ -0.88
NEDD8-206ENST00000531430 TBC1D25Q3MII6 688 aa9.57□□□□□ -0.88
NEDD8-206ENST00000531430 FSCBQ5H9T9 825 aa9.57□□□□□ -0.88
NEDD8-206ENST00000531430 PITRM1Q5JRX3 1037 aa9.57□□□□□ -0.88
NEDD8-206ENST00000531430 NUGGCQ68CJ6 796 aa9.57□□□□□ -0.88
NEDD8-206ENST00000531430 SPATS2Q86XZ4 545 aaKnown RBP9.57□□□□□ -0.88
NEDD8-206ENST00000531430 APCDD1Q8J025 514 aa9.57□□□□□ -0.88
NEDD8-206ENST00000531430 OXR1Q8N573 874 aa9.57□□□□□ -0.88
NEDD8-206ENST00000531430 AADATQ8N5Z0 425 aa9.57□□□□□ -0.88
NEDD8-206ENST00000531430 ZNF557Q8N988 423 aaPredicted RBP9.57□□□□□ -0.88
NEDD8-206ENST00000531430 HJURPQ8NCD3 748 aaPredicted RBP9.57□□□□□ -0.88
NEDD8-206ENST00000531430 ZNF248Q8NDW4 579 aa9.57□□□□□ -0.88
NEDD8-206ENST00000531430 FBXL13Q8NEE6 735 aa9.57□□□□□ -0.88
NEDD8-206ENST00000531430 SNIP1Q8TAD8 396 aaKnown RBP9.57□□□□□ -0.88
NEDD8-206ENST00000531430 KLK6Q92876 244 aa9.57□□□□□ -0.88
NEDD8-206ENST00000531430 KLHDC7BQ96G42 594 aa9.57□□□□□ -0.88
NEDD8-206ENST00000531430 INTS4Q96HW7 963 aaKnown RBP9.57□□□□□ -0.88
NEDD8-206ENST00000531430 MRGPRX3Q96LB0 322 aa9.57□□□□□ -0.88
NEDD8-206ENST00000531430 FAM129BQ96TA1 746 aa9.57□□□□□ -0.88
NEDD8-206ENST00000531430 MYOCQ99972 504 aa9.57□□□□□ -0.88
NEDD8-206ENST00000531430 ADAMTS1Q9UHI8 967 aa9.57□□□□□ -0.88
NEDD8-206ENST00000531430 INTS6Q9UL03 887 aaKnown RBP9.57□□□□□ -0.88
NEDD8-206ENST00000531430 TRAF3IP3Q9Y228 551 aa9.57□□□□□ -0.88
NEDD8-206ENST00000531430 CA5BQ9Y2D0 317 aa9.57□□□□□ -0.88
NEDD8-206ENST00000531430 PCDHB1Q9Y5F3 818 aa9.57□□□□□ -0.88
NEDD8-206ENST00000531430 CAPN8A6NHC0 703 aa9.56□□□□□ -0.88
NEDD8-206ENST00000531430 MAPK13O15264 365 aa9.56□□□□□ -0.88
NEDD8-206ENST00000531430 SLC31A1O15431 190 aa9.56□□□□□ -0.88
NEDD8-206ENST00000531430 IRAK2O43187 625 aa9.56□□□□□ -0.88
NEDD8-206ENST00000531430 STX10O60499 249 aa9.56□□□□□ -0.88
NEDD8-206ENST00000531430 MAGEC1O60732 1142 aa9.56□□□□□ -0.88
NEDD8-206ENST00000531430 RTN2O75298 545 aa9.56□□□□□ -0.88
NEDD8-206ENST00000531430 USP12O75317 370 aa9.56□□□□□ -0.88
NEDD8-206ENST00000531430 LATS1O95835 1130 aa9.56□□□□□ -0.88
NEDD8-206ENST00000531430 ADH1BP00325 375 aa9.56□□□□□ -0.88
NEDD8-206ENST00000531430 HSP90AA1P07900 732 aaKnown RBP9.56□□□□□ -0.88
NEDD8-206ENST00000531430 SRPRAP08240 638 aaKnown RBP9.56□□□□□ -0.88
NEDD8-206ENST00000531430 VDRP11473 427 aa9.56□□□□□ -0.88
NEDD8-206ENST00000531430 C5AR1P21730 350 aa9.56□□□□□ -0.88
NEDD8-206ENST00000531430 GTF2H1P32780 548 aa9.56□□□□□ -0.88
NEDD8-206ENST00000531430 RXRGP48443 463 aa9.56□□□□□ -0.88
NEDD8-206ENST00000531430 STK19P49842 368 aaPredicted RBP9.56□□□□□ -0.88
NEDD8-206ENST00000531430 MXI1P50539 228 aa9.56□□□□□ -0.88
NEDD8-206ENST00000531430 ADPRHP54922 357 aa9.56□□□□□ -0.88
NEDD8-206ENST00000531430 DAOAP59103 153 aa9.56□□□□□ -0.88
NEDD8-206ENST00000531430 PPP2CBP62714 309 aa9.56□□□□□ -0.88
NEDD8-206ENST00000531430 PPP2CAP67775 309 aa9.56□□□□□ -0.88
NEDD8-206ENST00000531430 DCAF6Q58WW2 860 aa9.56□□□□□ -0.88
NEDD8-206ENST00000531430 FAM133BQ5BKY9 247 aaKnown RBP9.56□□□□□ -0.88
NEDD8-206ENST00000531430 DCAF17Q5H9S7 520 aaPredicted RBP9.56□□□□□ -0.88
NEDD8-206ENST00000531430 MPP7Q5T2T1 576 aa9.56□□□□□ -0.88
NEDD8-206ENST00000531430 NAPEPLDQ6IQ20 393 aa9.56□□□□□ -0.88
NEDD8-206ENST00000531430 FOXR1Q6PIV2 292 aa9.56□□□□□ -0.88
NEDD8-206ENST00000531430 BHLHA9Q7RTU4 235 aa9.56□□□□□ -0.88
NEDD8-206ENST00000531430 LGI2Q8N0V4 545 aa9.56□□□□□ -0.88
NEDD8-206ENST00000531430 FAM181AQ8N9Y4 354 aa9.56□□□□□ -0.88
NEDD8-206ENST00000531430 MFSD2AQ8NA29 543 aa9.56□□□□□ -0.88
NEDD8-206ENST00000531430 MYEOVQ96EZ4 313 aa9.56□□□□□ -0.88
NEDD8-206ENST00000531430 MYO19Q96H55 970 aa9.56□□□□□ -0.88
NEDD8-206ENST00000531430 CNGB3Q9NQW8 809 aa9.56□□□□□ -0.88
NEDD8-206ENST00000531430 STOML2Q9UJZ1 356 aa9.56□□□□□ -0.88
NEDD8-206ENST00000531430 CFAP45Q9UL16 551 aa9.56□□□□□ -0.88
NEDD8-206ENST00000531430 FZD4Q9ULV1 537 aa9.56□□□□□ -0.88
NEDD8-206ENST00000531430 TRIM38O00635 465 aa9.55□□□□□ -0.88
NEDD8-206ENST00000531430 CETN3O15182 167 aa9.55□□□□□ -0.88
NEDD8-206ENST00000531430 ACTN4O43707 911 aaKnown RBP9.55□□□□□ -0.88
NEDD8-206ENST00000531430 LUC7L3O95232 432 aaKnown RBP9.55□□□□□ -0.88
NEDD8-206ENST00000531430 CENPBP07199 599 aaPredicted RBP9.55□□□□□ -0.88
NEDD8-206ENST00000531430 EPB41P11171 864 aaKnown RBP9.55□□□□□ -0.88
NEDD8-206ENST00000531430 VAV1P15498 845 aa9.55□□□□□ -0.88
NEDD8-206ENST00000531430 ACP1P24666 158 aa9.55□□□□□ -0.88
NEDD8-206ENST00000531430 PCBP4P57723 403 aaKnown RBP9.55□□□□□ -0.88
NEDD8-206ENST00000531430 TMPRSS3P57727 454 aa9.55□□□□□ -0.88
NEDD8-206ENST00000531430 YWHAEP62258 255 aaKnown RBP9.55□□□□□ -0.88
NEDD8-206ENST00000531430 GABREP78334 506 aa9.55□□□□□ -0.88
NEDD8-206ENST00000531430 KCNC4Q03721 635 aa9.55□□□□□ -0.88
NEDD8-206ENST00000531430 CUL2Q13617 745 aa9.55□□□□□ -0.88
NEDD8-206ENST00000531430 ZNF542PQ5EBM4 170 aa9.55□□□□□ -0.88
NEDD8-206ENST00000531430 RAP1GAP2Q684P5 730 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms