RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 DDX50Q9BQ39 737 aaKnown RBP19.08■□□□□ 0.64
SSSCA1-206ENST00000531405 ACE2Q9BYF1 805 aaPredicted RBP19.08■□□□□ 0.64
SSSCA1-206ENST00000531405 SCML1Q9UN30 329 aa19.08■□□□□ 0.64
SSSCA1-206ENST00000531405 A0A1W2PPC4 97 aa19.07■□□□□ 0.64
SSSCA1-206ENST00000531405 GOLGA6L4A6NEF3 574 aa19.07■□□□□ 0.64
SSSCA1-206ENST00000531405 TRABD2BA6NFA1 517 aa19.07■□□□□ 0.64
SSSCA1-206ENST00000531405 VILLO15195 856 aa19.07■□□□□ 0.64
SSSCA1-206ENST00000531405 PMM2O15305 246 aa19.07■□□□□ 0.64
SSSCA1-206ENST00000531405 RNASEH1O60930 286 aaKnown RBP19.07■□□□□ 0.64
SSSCA1-206ENST00000531405 LUC7L3O95232 432 aaKnown RBP19.07■□□□□ 0.64
SSSCA1-206ENST00000531405 WNT1P04628 370 aa19.07■□□□□ 0.64
SSSCA1-206ENST00000531405 PSMD8P48556 350 aa19.07■□□□□ 0.64
SSSCA1-206ENST00000531405 RACK1P63244 317 aaKnown RBP19.07■□□□□ 0.64
SSSCA1-206ENST00000531405 STIM1Q13586 685 aa19.07■□□□□ 0.64
SSSCA1-206ENST00000531405 KCNJ12Q14500 433 aa19.07■□□□□ 0.64
SSSCA1-206ENST00000531405 RAP1GAP2Q684P5 730 aa19.07■□□□□ 0.64
SSSCA1-206ENST00000531405 DENND1BQ6P3S1 775 aa19.07■□□□□ 0.64
SSSCA1-206ENST00000531405 DHRS13Q6UX07 377 aa19.07■□□□□ 0.64
SSSCA1-206ENST00000531405 GATAD2AQ86YP4 633 aa19.07■□□□□ 0.64
SSSCA1-206ENST00000531405 APCDD1Q8J025 514 aa19.07■□□□□ 0.64
SSSCA1-206ENST00000531405 LGI2Q8N0V4 545 aa19.07■□□□□ 0.64
SSSCA1-206ENST00000531405 GALNT15Q8N3T1 639 aa19.07■□□□□ 0.64
SSSCA1-206ENST00000531405 RPL10LQ96L21 214 aaKnown RBP19.07■□□□□ 0.64
SSSCA1-206ENST00000531405 KREMEN1Q96MU8 473 aa19.07■□□□□ 0.64
SSSCA1-206ENST00000531405 OMDQ99983 421 aa19.07■□□□□ 0.64
SSSCA1-206ENST00000531405 FTSJ1Q9UET6 329 aa19.07■□□□□ 0.64
SSSCA1-206ENST00000531405 SLCO3A1Q9UIG8 710 aa19.07■□□□□ 0.64
SSSCA1-206ENST00000531405 MAN1B1Q9UKM7 699 aa19.07■□□□□ 0.64
SSSCA1-206ENST00000531405 CEP83Q9Y592 693 aa19.07■□□□□ 0.64
SSSCA1-206ENST00000531405 A0A1B0GTQ1 180 aa19.06■□□□□ 0.64
SSSCA1-206ENST00000531405 CBX4O00257 560 aa19.06■□□□□ 0.64
SSSCA1-206ENST00000531405 WNT9AO14904 365 aa19.06■□□□□ 0.64
SSSCA1-206ENST00000531405 SLC8A1P32418 973 aa19.06■□□□□ 0.64
SSSCA1-206ENST00000531405 GPD2P43304 727 aa19.06■□□□□ 0.64
SSSCA1-206ENST00000531405 STK19P49842 368 aaPredicted RBP19.06■□□□□ 0.64
SSSCA1-206ENST00000531405 CYP4F3Q08477 520 aa19.06■□□□□ 0.64
SSSCA1-206ENST00000531405 NNTQ13423 1086 aa19.06■□□□□ 0.64
SSSCA1-206ENST00000531405 CAMK2BQ13554 666 aa19.06■□□□□ 0.64
SSSCA1-206ENST00000531405 ACAP1Q15027 740 aa19.06■□□□□ 0.64
SSSCA1-206ENST00000531405 TTI2Q6NXR4 508 aa19.06■□□□□ 0.64
SSSCA1-206ENST00000531405 CCDC117Q8IWD4 279 aaPredicted RBP19.06■□□□□ 0.64
SSSCA1-206ENST00000531405 AADATQ8N5Z0 425 aa19.06■□□□□ 0.64
SSSCA1-206ENST00000531405 DHTKD1Q96HY7 919 aaPredicted RBP19.06■□□□□ 0.64
SSSCA1-206ENST00000531405 FAM129BQ96TA1 746 aa19.06■□□□□ 0.64
SSSCA1-206ENST00000531405 AASDHPPTQ9NRN7 309 aa19.06■□□□□ 0.64
SSSCA1-206ENST00000531405 ITIH6Q6UXX5 1313 aa19.05■□□□□ 0.64
SSSCA1-206ENST00000531405 EDDM13A0A1B0GTR0 161 aa19.05■□□□□ 0.64
SSSCA1-206ENST00000531405 LRRC72A6NJI9 287 aa19.05■□□□□ 0.64
SSSCA1-206ENST00000531405 SRPRAP08240 638 aaKnown RBP19.05■□□□□ 0.64
SSSCA1-206ENST00000531405 KRT5P13647 590 aa19.05■□□□□ 0.64
SSSCA1-206ENST00000531405 RPL34P49207 117 aaKnown RBP19.05■□□□□ 0.64
SSSCA1-206ENST00000531405 PITX1P78337 314 aaPredicted RBP19.05■□□□□ 0.64
SSSCA1-206ENST00000531405 ECT2LQ008S8 904 aa19.05■□□□□ 0.64
SSSCA1-206ENST00000531405 GCNT1Q02742 428 aa19.05■□□□□ 0.64
SSSCA1-206ENST00000531405 CETN1Q12798 172 aa19.05■□□□□ 0.64
SSSCA1-206ENST00000531405 ARID5BQ14865 1188 aa19.05■□□□□ 0.64
SSSCA1-206ENST00000531405 SMAD1Q15797 465 aaKnown RBP19.05■□□□□ 0.64
SSSCA1-206ENST00000531405 ZC3H12AQ5D1E8 599 aaKnown RBP19.05■□□□□ 0.64
SSSCA1-206ENST00000531405 CHSY1Q86X52 802 aa19.05■□□□□ 0.64
SSSCA1-206ENST00000531405 CIR1Q86X95 450 aaPredicted RBP19.05■□□□□ 0.64
SSSCA1-206ENST00000531405 STK40Q8N2I9 435 aa19.05■□□□□ 0.64
SSSCA1-206ENST00000531405 KDM1BQ8NB78 822 aa19.05■□□□□ 0.64
SSSCA1-206ENST00000531405 EHBP1Q8NDI1 1231 aa19.05■□□□□ 0.64
SSSCA1-206ENST00000531405 OR2T34Q8NGX1 318 aa19.05■□□□□ 0.64
SSSCA1-206ENST00000531405 ADAMTS1Q9UHI8 967 aa19.05■□□□□ 0.64
SSSCA1-206ENST00000531405 CYTH4Q9UIA0 394 aa19.05■□□□□ 0.64
SSSCA1-206ENST00000531405 ASXL3Q9C0F0 2248 aa19.05■□□□□ 0.64
SSSCA1-206ENST00000531405 TARSL2A2RTX5 802 aaKnown RBP19.04■□□□□ 0.64
SSSCA1-206ENST00000531405 E5RJQ4 531 aa19.04■□□□□ 0.64
SSSCA1-206ENST00000531405 CAPN9O14815 690 aa19.04■□□□□ 0.64
SSSCA1-206ENST00000531405 P4HA2O15460 535 aa19.04■□□□□ 0.64
SSSCA1-206ENST00000531405 PAPSS1O43252 624 aaPredicted RBP19.04■□□□□ 0.64
SSSCA1-206ENST00000531405 MOCS3O95396 460 aa19.04■□□□□ 0.64
SSSCA1-206ENST00000531405 APOEP02649 317 aa19.04■□□□□ 0.64
SSSCA1-206ENST00000531405 VAV1P15498 845 aa19.04■□□□□ 0.64
SSSCA1-206ENST00000531405 TACR2P21452 398 aa19.04■□□□□ 0.64
SSSCA1-206ENST00000531405 CLDN6P56747 220 aa19.04■□□□□ 0.64
SSSCA1-206ENST00000531405 SHBQ15464 509 aa19.04■□□□□ 0.64
SSSCA1-206ENST00000531405 INAVAQ3KP66 663 aa19.04■□□□□ 0.64
SSSCA1-206ENST00000531405 SOWAHCQ53LP3 525 aaPredicted RBP19.04■□□□□ 0.64
SSSCA1-206ENST00000531405 RNF219Q5W0B1 726 aaPredicted RBP19.04■□□□□ 0.64
SSSCA1-206ENST00000531405 NELFBQ8WX92 580 aa19.04■□□□□ 0.64
SSSCA1-206ENST00000531405 PTPRN2Q92932 1015 aa19.04■□□□□ 0.64
SSSCA1-206ENST00000531405 LRIG1Q96JA1 1093 aa19.04■□□□□ 0.64
SSSCA1-206ENST00000531405 ELF4Q99607 663 aaPredicted RBP19.04■□□□□ 0.64
SSSCA1-206ENST00000531405 GTPBP4Q9BZE4 634 aaKnown RBP19.04■□□□□ 0.64
SSSCA1-206ENST00000531405 INTS2Q9H0H0 1204 aaKnown RBP19.04■□□□□ 0.64
SSSCA1-206ENST00000531405 ACP6Q9NPH0 428 aa19.04■□□□□ 0.64
SSSCA1-206ENST00000531405 DKK4Q9UBT3 224 aa19.04■□□□□ 0.64
SSSCA1-206ENST00000531405 TJP2Q9UDY2 1190 aa19.04■□□□□ 0.64
SSSCA1-206ENST00000531405 FZD4Q9ULV1 537 aa19.04■□□□□ 0.64
SSSCA1-206ENST00000531405 CTNND2Q9UQB3 1225 aa19.04■□□□□ 0.64
SSSCA1-206ENST00000531405 C10orf142B7Z368 130 aa19.03■□□□□ 0.64
SSSCA1-206ENST00000531405 PPP1R3GB7ZBB8 358 aa19.03■□□□□ 0.64
SSSCA1-206ENST00000531405 PLK4O00444 970 aa19.03■□□□□ 0.64
SSSCA1-206ENST00000531405 SART1O43290 800 aaKnown RBP19.03■□□□□ 0.64
SSSCA1-206ENST00000531405 DFNA5O60443 496 aa19.03■□□□□ 0.64
SSSCA1-206ENST00000531405 LETM1O95202 739 aaPredicted RBP19.03■□□□□ 0.64
SSSCA1-206ENST00000531405 TRUB2O95900 331 aaKnown RBP19.03■□□□□ 0.64
SSSCA1-206ENST00000531405 BMP6P22004 513 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms