RNA–Protein interactions for RNA: ENST00000531014.5

CTNND1-229, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-229ENST00000531014 RIN2Q8WYP3 895 aaPredicted RBP7.38□□□□□ -1.23
CTNND1-229ENST00000531014 PHB2Q99623 299 aa7.38□□□□□ -1.23
CTNND1-229ENST00000531014 RTFDC1Q9BY42 306 aaPredicted RBP7.38□□□□□ -1.23
CTNND1-229ENST00000531014 INTS2Q9H0H0 1204 aaKnown RBP7.38□□□□□ -1.23
CTNND1-229ENST00000531014 COL22A1Q8NFW1 1626 aaPredicted RBP7.38□□□□□ -1.23
CTNND1-229ENST00000531014 A0A087WWV3 80 aa7.38□□□□□ -1.23
CTNND1-229ENST00000531014 IFRD1O00458 451 aaPredicted RBP7.38□□□□□ -1.23
CTNND1-229ENST00000531014 PQBP1O60828 265 aaKnown RBP7.38□□□□□ -1.23
CTNND1-229ENST00000531014 FGBP02675 491 aa7.38□□□□□ -1.23
CTNND1-229ENST00000531014 SKIV2L2P42285 1042 aaKnown RBP7.38□□□□□ -1.23
CTNND1-229ENST00000531014 MCAMP43121 646 aa7.38□□□□□ -1.23
CTNND1-229ENST00000531014 CDC42P60953 191 aa7.38□□□□□ -1.23
CTNND1-229ENST00000531014 CDKL1Q00532 357 aa7.38□□□□□ -1.23
CTNND1-229ENST00000531014 SLC29A2Q14542 456 aa7.38□□□□□ -1.23
CTNND1-229ENST00000531014 DRAP1Q14919 205 aaPredicted RBP7.38□□□□□ -1.23
CTNND1-229ENST00000531014 HKDC1Q2TB90 917 aa7.38□□□□□ -1.23
CTNND1-229ENST00000531014 GALNTL6Q49A17 601 aa7.38□□□□□ -1.23
CTNND1-229ENST00000531014 MARK2Q7KZI7 788 aaKnown RBP7.38□□□□□ -1.23
CTNND1-229ENST00000531014 GLYCTKQ8IVS8 523 aa7.38□□□□□ -1.23
CTNND1-229ENST00000531014 THNSL1Q8IYQ7 743 aa7.38□□□□□ -1.23
CTNND1-229ENST00000531014 PM20D2Q8IYS1 436 aa7.38□□□□□ -1.23
CTNND1-229ENST00000531014 CMTR2Q8IYT2 770 aaKnown RBP7.38□□□□□ -1.23
CTNND1-229ENST00000531014 DEFB107AQ8IZN7 70 aa7.38□□□□□ -1.23
CTNND1-229ENST00000531014 FAR1Q8WVX9 515 aa7.38□□□□□ -1.23
CTNND1-229ENST00000531014 MYDGFQ969H8 173 aa7.38□□□□□ -1.23
CTNND1-229ENST00000531014 FAM111AQ96PZ2 611 aa7.38□□□□□ -1.23
CTNND1-229ENST00000531014 ADPRHL2Q9NX46 363 aa7.38□□□□□ -1.23
CTNND1-229ENST00000531014 UBP1Q9NZI7 540 aa7.38□□□□□ -1.23
CTNND1-229ENST00000531014 POFUT2Q9Y2G5 429 aa7.38□□□□□ -1.23
CTNND1-229ENST00000531014 TBC1D30Q9Y2I9 924 aa7.38□□□□□ -1.23
CTNND1-229ENST00000531014 H7C2Y5 167 aa7.38□□□□□ -1.23
CTNND1-229ENST00000531014 METTL18O95568 372 aa7.38□□□□□ -1.23
CTNND1-229ENST00000531014 NR3C1P04150 777 aa7.38□□□□□ -1.23
CTNND1-229ENST00000531014 GCLMP48507 274 aa7.38□□□□□ -1.23
CTNND1-229ENST00000531014 CDH4P55283 916 aa7.38□□□□□ -1.23
CTNND1-229ENST00000531014 KCNH2Q12809 1159 aa7.38□□□□□ -1.23
CTNND1-229ENST00000531014 RHEBQ15382 184 aa7.38□□□□□ -1.23
CTNND1-229ENST00000531014 LRRC69Q6ZNQ3 347 aa7.38□□□□□ -1.23
CTNND1-229ENST00000531014 SLC44A5Q8NCS7 719 aa7.38□□□□□ -1.23
CTNND1-229ENST00000531014 TSPAN14Q8NG11 270 aa7.38□□□□□ -1.23
CTNND1-229ENST00000531014 NSUN6Q8TEA1 469 aaKnown RBP7.38□□□□□ -1.23
CTNND1-229ENST00000531014 FIG4Q92562 907 aa7.38□□□□□ -1.23
CTNND1-229ENST00000531014 PPP1R10Q96QC0 940 aaKnown RBP7.38□□□□□ -1.23
CTNND1-229ENST00000531014 MED28Q9H204 178 aa7.38□□□□□ -1.23
CTNND1-229ENST00000531014 RXFP1Q9HBX9 757 aa7.38□□□□□ -1.23
CTNND1-229ENST00000531014 WBP1LQ9NX94 342 aa7.38□□□□□ -1.23
CTNND1-229ENST00000531014 CHORDC1Q9UHD1 332 aaPredicted RBP7.38□□□□□ -1.23
CTNND1-229ENST00000531014 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.38□□□□□ -1.23
CTNND1-229ENST00000531014 PCDHGA4Q9Y5G9 962 aa7.38□□□□□ -1.23
CTNND1-229ENST00000531014 N6AMT1Q9Y5N5 214 aa7.38□□□□□ -1.23
CTNND1-229ENST00000531014 AK5Q9Y6K8 562 aa7.38□□□□□ -1.23
CTNND1-229ENST00000531014 FAM208AQ9UK61 1670 aaKnown RBP7.38□□□□□ -1.23
CTNND1-229ENST00000531014 IFNA6P05013 189 aa7.38□□□□□ -1.23
CTNND1-229ENST00000531014 PGDP52209 483 aa7.38□□□□□ -1.23
CTNND1-229ENST00000531014 AP3S2P59780 193 aa7.38□□□□□ -1.23
CTNND1-229ENST00000531014 PTPAQ15257 358 aa7.38□□□□□ -1.23
CTNND1-229ENST00000531014 CATSPER4Q7RTX7 472 aa7.38□□□□□ -1.23
CTNND1-229ENST00000531014 LRRC70Q7Z2Q7 622 aa7.38□□□□□ -1.23
CTNND1-229ENST00000531014 SFRP1Q8N474 314 aa7.38□□□□□ -1.23
CTNND1-229ENST00000531014 ATPAF2Q8N5M1 289 aa7.38□□□□□ -1.23
CTNND1-229ENST00000531014 B3GALNT2Q8NCR0 500 aa7.38□□□□□ -1.23
CTNND1-229ENST00000531014 CKAP2Q8WWK9 683 aa7.38□□□□□ -1.23
CTNND1-229ENST00000531014 PRCCQ92733 491 aaPredicted RBP7.38□□□□□ -1.23
CTNND1-229ENST00000531014 Q96MT0 163 aa7.38□□□□□ -1.23
CTNND1-229ENST00000531014 SLC4A9Q96Q91 983 aa7.38□□□□□ -1.23
CTNND1-229ENST00000531014 PNKPQ96T60 521 aa7.38□□□□□ -1.23
CTNND1-229ENST00000531014 PRKD2Q9BZL6 878 aa7.38□□□□□ -1.23
CTNND1-229ENST00000531014 CST11Q9H112 138 aa7.38□□□□□ -1.23
CTNND1-229ENST00000531014 TRNAU1APQ9NX07 287 aaKnown RBP7.38□□□□□ -1.23
CTNND1-229ENST00000531014 MORF4L1Q9UBU8 362 aa7.38□□□□□ -1.23
CTNND1-229ENST00000531014 UBQLN1Q9UMX0 589 aaKnown RBP7.38□□□□□ -1.23
CTNND1-229ENST00000531014 ABCB11O95342 1321 aa7.38□□□□□ -1.23
CTNND1-229ENST00000531014 PSMD11O00231 422 aa7.37□□□□□ -1.23
CTNND1-229ENST00000531014 TRIM38O00635 465 aa7.37□□□□□ -1.23
CTNND1-229ENST00000531014 INPP4BO15327 924 aa7.37□□□□□ -1.23
CTNND1-229ENST00000531014 NCAM2O15394 837 aa7.37□□□□□ -1.23
CTNND1-229ENST00000531014 CLDN3O15551 220 aa7.37□□□□□ -1.23
CTNND1-229ENST00000531014 RPS6KA5O75582 802 aa7.37□□□□□ -1.23
CTNND1-229ENST00000531014 CYBBP04839 570 aa7.37□□□□□ -1.23
CTNND1-229ENST00000531014 STIP1P31948 543 aaKnown RBP7.37□□□□□ -1.23
CTNND1-229ENST00000531014 AQP5P55064 265 aa7.37□□□□□ -1.23
CTNND1-229ENST00000531014 FGD3Q5JSP0 725 aa7.37□□□□□ -1.23
CTNND1-229ENST00000531014 NBPF12Q5TAG4 269 aaPredicted RBP7.37□□□□□ -1.23
CTNND1-229ENST00000531014 IER5Q5VY09 327 aa7.37□□□□□ -1.23
CTNND1-229ENST00000531014 PDPK2PQ6A1A2 396 aa7.37□□□□□ -1.23
CTNND1-229ENST00000531014 GALNT18Q6P9A2 607 aa7.37□□□□□ -1.23
CTNND1-229ENST00000531014 FRMD7Q6ZUT3 714 aa7.37□□□□□ -1.23
CTNND1-229ENST00000531014 TRIM74Q86UV6 250 aa7.37□□□□□ -1.23
CTNND1-229ENST00000531014 TRIM73Q86UV7 250 aa7.37□□□□□ -1.23
CTNND1-229ENST00000531014 STK32AQ8WU08 396 aa7.37□□□□□ -1.23
CTNND1-229ENST00000531014 KCNB2Q92953 911 aa7.37□□□□□ -1.23
CTNND1-229ENST00000531014 GPRASP2Q96D09 838 aa7.37□□□□□ -1.23
CTNND1-229ENST00000531014 BPIFA3Q9BQP9 254 aa7.37□□□□□ -1.23
CTNND1-229ENST00000531014 GPAMQ9HCL2 828 aa7.37□□□□□ -1.23
CTNND1-229ENST00000531014 POLD4Q9HCU8 107 aa7.37□□□□□ -1.23
CTNND1-229ENST00000531014 TMEM51Q9NW97 253 aa7.37□□□□□ -1.23
CTNND1-229ENST00000531014 HPF1Q9NWY4 346 aa7.37□□□□□ -1.23
CTNND1-229ENST00000531014 GIN1Q9NXP7 522 aa7.37□□□□□ -1.23
CTNND1-229ENST00000531014 MARK1Q9P0L2 795 aa7.37□□□□□ -1.23
CTNND1-229ENST00000531014 CROTQ9UKG9 612 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms