RNA–Protein interactions for RNA: ENST00000531007.1

CTNND1-228, Transcript of catenin delta 1, humanhuman

TSL 4

Gene CTNND1, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-228ENST00000531007 LRRC3Q9BY71 257 aa10.16□□□□□ -0.78
CTNND1-228ENST00000531007 ZYG11BQ9C0D3 744 aa10.16□□□□□ -0.78
CTNND1-228ENST00000531007 CCSER2Q9H7U1 834 aa10.16□□□□□ -0.78
CTNND1-228ENST00000531007 PCDH9Q9HC56 1237 aa10.16□□□□□ -0.78
CTNND1-228ENST00000531007 MAN1C1Q9NR34 630 aa10.16□□□□□ -0.78
CTNND1-228ENST00000531007 GPATCH2LQ9NWQ4 482 aa10.16□□□□□ -0.78
CTNND1-228ENST00000531007 LMCD1Q9NZU5 365 aa10.16□□□□□ -0.78
CTNND1-228ENST00000531007 STOML2Q9UJZ1 356 aa10.16□□□□□ -0.78
CTNND1-228ENST00000531007 LSM7Q9UK45 103 aaKnown RBP10.16□□□□□ -0.78
CTNND1-228ENST00000531007 DNPEPQ9ULA0 475 aa10.16□□□□□ -0.78
CTNND1-228ENST00000531007 R3HDM2Q9Y2K5 976 aaKnown RBP10.16□□□□□ -0.78
CTNND1-228ENST00000531007 YBX2Q9Y2T7 364 aaKnown RBP10.16□□□□□ -0.78
CTNND1-228ENST00000531007 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.15□□□□□ -0.78
CTNND1-228ENST00000531007 TRAV19A0A0A6YYK7 116 aa10.15□□□□□ -0.78
CTNND1-228ENST00000531007 DRGXA6NNA5 263 aa10.15□□□□□ -0.78
CTNND1-228ENST00000531007 H7C0C1 242 aa10.15□□□□□ -0.78
CTNND1-228ENST00000531007 MSI1O43347 362 aaKnown RBP10.15□□□□□ -0.78
CTNND1-228ENST00000531007 COCHO43405 550 aa10.15□□□□□ -0.78
CTNND1-228ENST00000531007 KRT14P02533 472 aa10.15□□□□□ -0.78
CTNND1-228ENST00000531007 RHOQP17081 205 aa10.15□□□□□ -0.78
CTNND1-228ENST00000531007 HDCP19113 662 aa10.15□□□□□ -0.78
CTNND1-228ENST00000531007 AMPD1P23109 780 aa10.15□□□□□ -0.78
CTNND1-228ENST00000531007 GABRR2P28476 465 aa10.15□□□□□ -0.78
CTNND1-228ENST00000531007 WEE1P30291 646 aa10.15□□□□□ -0.78
CTNND1-228ENST00000531007 ATP5OP48047 213 aa10.15□□□□□ -0.78
CTNND1-228ENST00000531007 NDST2P52849 883 aa10.15□□□□□ -0.78
CTNND1-228ENST00000531007 VSNL1P62760 191 aa10.15□□□□□ -0.78
CTNND1-228ENST00000531007 DYNLT1P63172 113 aa10.15□□□□□ -0.78
CTNND1-228ENST00000531007 SLC7A5Q01650 507 aa10.15□□□□□ -0.78
CTNND1-228ENST00000531007 SNX1Q13596 522 aa10.15□□□□□ -0.78
CTNND1-228ENST00000531007 SPDYCQ5MJ68 293 aa10.15□□□□□ -0.78
CTNND1-228ENST00000531007 RABGAP1LQ5R372 815 aa10.15□□□□□ -0.78
CTNND1-228ENST00000531007 FAM109BQ6ICB4 259 aaPredicted RBP10.15□□□□□ -0.78
CTNND1-228ENST00000531007 DARS2Q6PI48 645 aaKnown RBP10.15□□□□□ -0.78
CTNND1-228ENST00000531007 MTERF4Q7Z6M4 381 aaKnown RBP10.15□□□□□ -0.78
CTNND1-228ENST00000531007 TMEM150AQ86TG1 271 aa10.15□□□□□ -0.78
CTNND1-228ENST00000531007 TMC8Q8IU68 726 aa10.15□□□□□ -0.78
CTNND1-228ENST00000531007 FAM174AQ8TBP5 190 aa10.15□□□□□ -0.78
CTNND1-228ENST00000531007 TFB1MQ8WVM0 346 aaKnown RBP10.15□□□□□ -0.78
CTNND1-228ENST00000531007 ATG4AQ8WYN0 398 aa10.15□□□□□ -0.78
CTNND1-228ENST00000531007 HPS1Q92902 700 aa10.15□□□□□ -0.78
CTNND1-228ENST00000531007 MRPL38Q96DV4 380 aaKnown RBP10.15□□□□□ -0.78
CTNND1-228ENST00000531007 OLFM3Q96PB7 478 aa10.15□□□□□ -0.78
CTNND1-228ENST00000531007 PPP1R2P1Q96PQ5 205 aa10.15□□□□□ -0.78
CTNND1-228ENST00000531007 QKIQ96PU8 341 aaKnown RBP eCLIP10.15□□□□□ -0.783e-8■■■□□ 17
CTNND1-228ENST00000531007 PNKPQ96T60 521 aa10.15□□□□□ -0.78
CTNND1-228ENST00000531007 VAT1Q99536 393 aa10.15□□□□□ -0.78
CTNND1-228ENST00000531007 KLF16Q9BXK1 252 aaPredicted RBP10.15□□□□□ -0.78
CTNND1-228ENST00000531007 FRMD8Q9BZ67 464 aaPredicted RBP10.15□□□□□ -0.78
CTNND1-228ENST00000531007 PRO3102Q9H379 93 aa10.15□□□□□ -0.78
CTNND1-228ENST00000531007 TLE6Q9H808 572 aa10.15□□□□□ -0.78
CTNND1-228ENST00000531007 DTLQ9NZJ0 730 aa10.15□□□□□ -0.78
CTNND1-228ENST00000531007 MTRF1LQ9UGC7 380 aaKnown RBP10.15□□□□□ -0.78
CTNND1-228ENST00000531007 NEU2Q9Y3R4 380 aa10.15□□□□□ -0.78
CTNND1-228ENST00000531007 HEY1Q9Y5J3 304 aa10.15□□□□□ -0.78
CTNND1-228ENST00000531007 HS3ST4Q9Y661 456 aa10.15□□□□□ -0.78
CTNND1-228ENST00000531007 TMEM265A0A087WTH1 108 aa10.14□□□□□ -0.79
CTNND1-228ENST00000531007 E9PAM4 449 aa10.14□□□□□ -0.79
CTNND1-228ENST00000531007 F5H5T6 163 aa10.14□□□□□ -0.79
CTNND1-228ENST00000531007 I6L893 689 aaPredicted RBP10.14□□□□□ -0.79
CTNND1-228ENST00000531007 SGK1O00141 431 aa10.14□□□□□ -0.79
CTNND1-228ENST00000531007 ACSL4O60488 711 aa10.14□□□□□ -0.79
CTNND1-228ENST00000531007 TBX18O95935 607 aa10.14□□□□□ -0.79
CTNND1-228ENST00000531007 TCF3P15923 654 aa10.14□□□□□ -0.79
CTNND1-228ENST00000531007 IRS1P35568 1242 aa10.14□□□□□ -0.79
CTNND1-228ENST00000531007 ADCY8P40145 1251 aa10.14□□□□□ -0.79
CTNND1-228ENST00000531007 KCNJ1P48048 391 aa10.14□□□□□ -0.79
CTNND1-228ENST00000531007 MAPKAPK2P49137 400 aa10.14□□□□□ -0.79
CTNND1-228ENST00000531007 AUHQ13825 339 aaKnown RBP10.14□□□□□ -0.79
CTNND1-228ENST00000531007 NAA30Q147X3 362 aaPredicted RBP10.14□□□□□ -0.79
CTNND1-228ENST00000531007 MORF4L2Q15014 288 aa10.14□□□□□ -0.79
CTNND1-228ENST00000531007 AGERQ15109 404 aa10.14□□□□□ -0.79
CTNND1-228ENST00000531007 LLGL1Q15334 1064 aa10.14□□□□□ -0.79
CTNND1-228ENST00000531007 DUSP6Q16828 381 aa10.14□□□□□ -0.79
CTNND1-228ENST00000531007 MS4A13Q5J8X5 152 aa10.14□□□□□ -0.79
CTNND1-228ENST00000531007 TMCO4Q5TGY1 634 aa10.14□□□□□ -0.79
CTNND1-228ENST00000531007 HEATR6Q6AI08 1181 aaKnown RBP10.14□□□□□ -0.79
CTNND1-228ENST00000531007 TIGD7Q6NT04 549 aaPredicted RBP10.14□□□□□ -0.79
CTNND1-228ENST00000531007 RWDD4Q6NW29 188 aaKnown RBP10.14□□□□□ -0.79
CTNND1-228ENST00000531007 TMEM184AQ6ZMB5 413 aa10.14□□□□□ -0.79
CTNND1-228ENST00000531007 BPHLQ86WA6 291 aaPredicted RBP10.14□□□□□ -0.79
CTNND1-228ENST00000531007 PYROXD2Q8N2H3 581 aa10.14□□□□□ -0.79
CTNND1-228ENST00000531007 RTL3Q8N8U3 475 aaKnown RBP10.14□□□□□ -0.79
CTNND1-228ENST00000531007 FATE1Q969F0 183 aa10.14□□□□□ -0.79
CTNND1-228ENST00000531007 CAVIN3Q969G5 261 aa10.14□□□□□ -0.79
CTNND1-228ENST00000531007 TIFAQ96CG3 184 aa10.14□□□□□ -0.79
CTNND1-228ENST00000531007 HDAC11Q96DB2 347 aa10.14□□□□□ -0.79
CTNND1-228ENST00000531007 TSGA13Q96PP4 275 aa10.14□□□□□ -0.79
CTNND1-228ENST00000531007 PRMT1Q99873 361 aaKnown RBP10.14□□□□□ -0.79
CTNND1-228ENST00000531007 PHACTR1Q9C0D0 580 aa10.14□□□□□ -0.79
CTNND1-228ENST00000531007 SIK2Q9H0K1 926 aa10.14□□□□□ -0.79
CTNND1-228ENST00000531007 NKX2-4Q9H2Z4 354 aa10.14□□□□□ -0.79
CTNND1-228ENST00000531007 ATXN3LQ9H3M9 355 aa10.14□□□□□ -0.79
CTNND1-228ENST00000531007 SFXN1Q9H9B4 322 aa10.14□□□□□ -0.79
CTNND1-228ENST00000531007 ANLNQ9NQW6 1124 aa10.14□□□□□ -0.79
CTNND1-228ENST00000531007 HAUS2Q9NVX0 235 aa10.14□□□□□ -0.79
CTNND1-228ENST00000531007 TMEM248Q9NWD8 314 aa10.14□□□□□ -0.79
CTNND1-228ENST00000531007 PAK5Q9P286 719 aa10.14□□□□□ -0.79
CTNND1-228ENST00000531007 ASIC3Q9UHC3 531 aa10.14□□□□□ -0.79
CTNND1-228ENST00000531007 RANBP2P49792 3224 aaKnown RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms