RNA–Protein interactions for RNA: ENST00000530516.1

NUP98-218, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 391 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-218ENST00000530516 SLC25A28Q96A46 364 aa3.35□□□□□ -1.87
NUP98-218ENST00000530516 TMEM204Q9BSN7 226 aa3.35□□□□□ -1.87
NUP98-218ENST00000530516 OSBPL5Q9H0X9 879 aaPredicted RBP3.35□□□□□ -1.87
NUP98-218ENST00000530516 CCDC134Q9H6E4 229 aa3.35□□□□□ -1.87
NUP98-218ENST00000530516 AAMDCQ9H7C9 122 aa3.35□□□□□ -1.87
NUP98-218ENST00000530516 MLXIPQ9HAP2 919 aa3.35□□□□□ -1.87
NUP98-218ENST00000530516 ARFGAP3Q9NP61 516 aa3.35□□□□□ -1.87
NUP98-218ENST00000530516 SPAG4Q9NPE6 437 aa3.35□□□□□ -1.87
NUP98-218ENST00000530516 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.35□□□□□ -1.87
NUP98-218ENST00000530516 SLC12A4Q9UP95 1085 aa3.35□□□□□ -1.87
NUP98-218ENST00000530516 ICKQ9UPZ9 632 aa3.35□□□□□ -1.87
NUP98-218ENST00000530516 CNTN6Q9UQ52 1028 aa3.35□□□□□ -1.87
NUP98-218ENST00000530516 ABHD14A-ACY1A0A1B0GW23 586 aa3.34□□□□□ -1.87
NUP98-218ENST00000530516 ALDOAP04075 364 aaKnown RBP3.34□□□□□ -1.87
NUP98-218ENST00000530516 CYP21A2P08686 494 aa3.34□□□□□ -1.87
NUP98-218ENST00000530516 HOXB2P14652 356 aa3.34□□□□□ -1.87
NUP98-218ENST00000530516 CDC25AP30304 524 aa3.34□□□□□ -1.87
NUP98-218ENST00000530516 RBM6P78332 1123 aaKnown RBP3.34□□□□□ -1.87
NUP98-218ENST00000530516 SF3A3Q12874 501 aaKnown RBP eCLIP3.34□□□□□ -1.87
NUP98-218ENST00000530516 INPP5JQ15735 1006 aaPredicted RBP3.34□□□□□ -1.87
NUP98-218ENST00000530516 PFKFB4Q16877 469 aa3.34□□□□□ -1.87
NUP98-218ENST00000530516 Q6ZTC4 211 aa3.34□□□□□ -1.87
NUP98-218ENST00000530516 RFX8Q6ZV50 586 aa3.34□□□□□ -1.87
NUP98-218ENST00000530516 GATAD2AQ86YP4 633 aa3.34□□□□□ -1.87
NUP98-218ENST00000530516 FAM47BQ8NA70 645 aa3.34□□□□□ -1.87
NUP98-218ENST00000530516 WDR60Q8WVS4 1066 aa3.34□□□□□ -1.87
NUP98-218ENST00000530516 IP6K1Q92551 441 aa3.34□□□□□ -1.87
NUP98-218ENST00000530516 RSC1A1Q92681 617 aa3.34□□□□□ -1.87
NUP98-218ENST00000530516 EID2BQ96D98 161 aa3.34□□□□□ -1.87
NUP98-218ENST00000530516 REXO5Q96IC2 774 aaKnown RBP3.34□□□□□ -1.87
NUP98-218ENST00000530516 MEIS3Q99687 375 aa3.34□□□□□ -1.87
NUP98-218ENST00000530516 WDR83Q9BRX9 315 aaKnown RBP3.34□□□□□ -1.87
NUP98-218ENST00000530516 CRB3Q9BUF7 120 aa3.34□□□□□ -1.87
NUP98-218ENST00000530516 KATNAL1Q9BW62 490 aa3.34□□□□□ -1.87
NUP98-218ENST00000530516 SFXN1Q9H9B4 322 aa3.34□□□□□ -1.87
NUP98-218ENST00000530516 TXLNGQ9NUQ3 528 aa3.34□□□□□ -1.87
NUP98-218ENST00000530516 DAPP1Q9UN19 280 aa3.34□□□□□ -1.87
NUP98-218ENST00000530516 PROCRQ9UNN8 238 aa3.34□□□□□ -1.87
NUP98-218ENST00000530516 LAMP3Q9UQV4 416 aa3.34□□□□□ -1.87
NUP98-218ENST00000530516 COPG1Q9Y678 874 aaKnown RBP3.34□□□□□ -1.87
NUP98-218ENST00000530516 LMTK3Q96Q04 1460 aa3.34□□□□□ -1.88
NUP98-218ENST00000530516 CXorf65A6NEN9 183 aa3.33□□□□□ -1.88
NUP98-218ENST00000530516 C3orf70A6NLC5 250 aaPredicted RBP3.33□□□□□ -1.88
NUP98-218ENST00000530516 RHODO00212 210 aa3.33□□□□□ -1.88
NUP98-218ENST00000530516 SYT5O00445 386 aa3.33□□□□□ -1.88
NUP98-218ENST00000530516 PRPF4O43172 522 aaKnown RBP eCLIP3.33□□□□□ -1.88
NUP98-218ENST00000530516 HEXIM1O94992 359 aaKnown RBP3.33□□□□□ -1.88
NUP98-218ENST00000530516 SETSIPP0DME0 302 aa3.33□□□□□ -1.88
NUP98-218ENST00000530516 CHRNB1P11230 501 aa3.33□□□□□ -1.88
NUP98-218ENST00000530516 GRK5P34947 590 aa3.33□□□□□ -1.88
NUP98-218ENST00000530516 DLGAP5Q15398 846 aa3.33□□□□□ -1.88
NUP98-218ENST00000530516 ZACNQ401N2 412 aa3.33□□□□□ -1.88
NUP98-218ENST00000530516 MANEAQ5SRI9 462 aa3.33□□□□□ -1.88
NUP98-218ENST00000530516 ISM2Q6H9L7 571 aa3.33□□□□□ -1.88
NUP98-218ENST00000530516 ZNF549Q6P9A3 640 aa3.33□□□□□ -1.88
NUP98-218ENST00000530516 KIAA1324Q6UXG2 1013 aaKnown RBP3.33□□□□□ -1.88
NUP98-218ENST00000530516 LRIG3Q6UXM1 1119 aa3.33□□□□□ -1.88
NUP98-218ENST00000530516 GPSM1Q86YR5 675 aa3.33□□□□□ -1.88
NUP98-218ENST00000530516 RBMXL3Q8N7X1 1067 aaKnown RBP3.33□□□□□ -1.88
NUP98-218ENST00000530516 ZNF527Q8NB42 609 aa3.33□□□□□ -1.88
NUP98-218ENST00000530516 SCAMP5Q8TAC9 235 aa3.33□□□□□ -1.88
NUP98-218ENST00000530516 NLRP4Q96MN2 994 aa3.33□□□□□ -1.88
NUP98-218ENST00000530516 HTATIP2Q9BUP3 242 aa3.33□□□□□ -1.88
NUP98-218ENST00000530516 SORBS1Q9BX66 1292 aaKnown RBP3.33□□□□□ -1.88
NUP98-218ENST00000530516 FRMD8Q9BZ67 464 aaPredicted RBP3.33□□□□□ -1.88
NUP98-218ENST00000530516 ARHGAP39Q9C0H5 1083 aa3.33□□□□□ -1.88
NUP98-218ENST00000530516 PRDM8Q9NQV8 689 aa3.33□□□□□ -1.88
NUP98-218ENST00000530516 IPO11Q9UI26 975 aaKnown RBP3.33□□□□□ -1.88
NUP98-218ENST00000530516 FBXO4Q9UKT5 387 aa3.33□□□□□ -1.88
NUP98-218ENST00000530516 NFU1Q9UMS0 254 aa3.33□□□□□ -1.88
NUP98-218ENST00000530516 ZNF335Q9H4Z2 1342 aaPredicted RBP3.33□□□□□ -1.88
NUP98-218ENST00000530516 AGAP5A6NIR3 686 aa3.32□□□□□ -1.88
NUP98-218ENST00000530516 MBD3L5A6NJ08 208 aaPredicted RBP3.32□□□□□ -1.88
NUP98-218ENST00000530516 C4orf47A7E2U8 309 aa3.32□□□□□ -1.88
NUP98-218ENST00000530516 FOXO6A8MYZ6 492 aa3.32□□□□□ -1.88
NUP98-218ENST00000530516 ACKR2O00590 384 aa3.32□□□□□ -1.88
NUP98-218ENST00000530516 NEURL1O76050 574 aa3.32□□□□□ -1.88
NUP98-218ENST00000530516 TBXAS1P24557 533 aaPredicted RBP3.32□□□□□ -1.88
NUP98-218ENST00000530516 ALDH7A1P49419 539 aaKnown RBP3.32□□□□□ -1.88
NUP98-218ENST00000530516 PGGT1BP53609 377 aa3.32□□□□□ -1.88
NUP98-218ENST00000530516 ADPRHP54922 357 aa3.32□□□□□ -1.88
NUP98-218ENST00000530516 ZXDBP98169 803 aa3.32□□□□□ -1.88
NUP98-218ENST00000530516 TNFAIP2Q03169 654 aa3.32□□□□□ -1.88
NUP98-218ENST00000530516 ZBTB16Q05516 673 aa3.32□□□□□ -1.88
NUP98-218ENST00000530516 UBE4AQ14139 1066 aa3.32□□□□□ -1.88
NUP98-218ENST00000530516 PUM3Q15397 648 aaKnown RBP3.32□□□□□ -1.88
NUP98-218ENST00000530516 PRTGQ2VWP7 1150 aa3.32□□□□□ -1.88
NUP98-218ENST00000530516 ARL13AQ5H913 290 aaPredicted RBP3.32□□□□□ -1.88
NUP98-218ENST00000530516 C6orf10Q5SRN2 563 aa3.32□□□□□ -1.88
NUP98-218ENST00000530516 B4GALNT4Q76KP1 1039 aa3.32□□□□□ -1.88
NUP98-218ENST00000530516 ADPRHL1Q8NDY3 354 aa3.32□□□□□ -1.88
NUP98-218ENST00000530516 STT3BQ8TCJ2 826 aa3.32□□□□□ -1.88
NUP98-218ENST00000530516 ASB5Q8WWX0 329 aa3.32□□□□□ -1.88
NUP98-218ENST00000530516 INPP5DQ92835 1189 aa3.32□□□□□ -1.88
NUP98-218ENST00000530516 CLMNQ96JQ2 1002 aa3.32□□□□□ -1.88
NUP98-218ENST00000530516 ADAD1Q96M93 576 aaKnown RBP3.32□□□□□ -1.88
NUP98-218ENST00000530516 RTKNQ9BST9 563 aa3.32□□□□□ -1.88
NUP98-218ENST00000530516 PCGF6Q9BYE7 350 aa3.32□□□□□ -1.88
NUP98-218ENST00000530516 SLCO5A1Q9H2Y9 848 aa3.32□□□□□ -1.88
NUP98-218ENST00000530516 ABHD16BQ9H3Z7 469 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms