RNA–Protein interactions for RNA: ENST00000530309.1

CASP4-208, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-208ENST00000530309 SOX2P48431 317 aa6.59□□□□□ -1.35
CASP4-208ENST00000530309 HMGA2P52926 109 aa6.59□□□□□ -1.35
CASP4-208ENST00000530309 ADPRHP54922 357 aa6.59□□□□□ -1.35
CASP4-208ENST00000530309 RUNDC3AQ59EK9 446 aa6.59□□□□□ -1.35
CASP4-208ENST00000530309 INTS11Q5TA45 600 aaKnown RBP6.59□□□□□ -1.35
CASP4-208ENST00000530309 LCE5AQ5TCM9 118 aa6.59□□□□□ -1.35
CASP4-208ENST00000530309 ATG16L1Q676U5 607 aa6.59□□□□□ -1.35
CASP4-208ENST00000530309 ANO7Q6IWH7 933 aa6.59□□□□□ -1.35
CASP4-208ENST00000530309 RBM44Q6ZP01 1051 aaKnown RBP6.59□□□□□ -1.35
CASP4-208ENST00000530309 PTF1AQ7RTS3 328 aa6.59□□□□□ -1.35
CASP4-208ENST00000530309 TMEM200AQ86VY9 491 aa6.59□□□□□ -1.35
CASP4-208ENST00000530309 ADGRG3Q86Y34 549 aa6.59□□□□□ -1.35
CASP4-208ENST00000530309 NAXEQ8NCW5 288 aa6.59□□□□□ -1.35
CASP4-208ENST00000530309 STAMQ92783 540 aa6.59□□□□□ -1.35
CASP4-208ENST00000530309 C5orf34Q96MH7 638 aa6.59□□□□□ -1.35
CASP4-208ENST00000530309 PPM1MQ96MI6 270 aa6.59□□□□□ -1.35
CASP4-208ENST00000530309 TRIM31Q9BZY9 425 aa6.59□□□□□ -1.35
CASP4-208ENST00000530309 THAP1Q9NVV9 213 aa6.59□□□□□ -1.35
CASP4-208ENST00000530309 KLQ9UEF7 1012 aa6.59□□□□□ -1.35
CASP4-208ENST00000530309 COX11Q9Y6N1 276 aa6.59□□□□□ -1.35
CASP4-208ENST00000530309 LMTK3Q96Q04 1460 aa6.59□□□□□ -1.36
CASP4-208ENST00000530309 MANSC4A6NHS7 340 aaPredicted RBP6.58□□□□□ -1.36
CASP4-208ENST00000530309 MCIDASD6RGH6 385 aa6.58□□□□□ -1.36
CASP4-208ENST00000530309 SH3BP5O60239 455 aa6.58□□□□□ -1.36
CASP4-208ENST00000530309 PRKCGP05129 697 aa6.58□□□□□ -1.36
CASP4-208ENST00000530309 HOXB9P17482 250 aaPredicted RBP6.58□□□□□ -1.36
CASP4-208ENST00000530309 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.58□□□□□ -1.36
CASP4-208ENST00000530309 MAPK7Q13164 816 aa6.58□□□□□ -1.36
CASP4-208ENST00000530309 TBX2Q13207 712 aaPredicted RBP6.58□□□□□ -1.36
CASP4-208ENST00000530309 MTA1Q13330 715 aa6.58□□□□□ -1.36
CASP4-208ENST00000530309 WDR45BQ5MNZ6 344 aa6.58□□□□□ -1.36
CASP4-208ENST00000530309 ZNF782Q6ZMW2 699 aaPredicted RBP6.58□□□□□ -1.36
CASP4-208ENST00000530309 MDGA2Q7Z553 956 aa6.58□□□□□ -1.36
CASP4-208ENST00000530309 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.58□□□□□ -1.36
CASP4-208ENST00000530309 SCN4BQ8IWT1 228 aa6.58□□□□□ -1.36
CASP4-208ENST00000530309 OR52N4Q8NGI2 321 aa6.58□□□□□ -1.36
CASP4-208ENST00000530309 OSR1Q8TAX0 266 aaPredicted RBP6.58□□□□□ -1.36
CASP4-208ENST00000530309 HTRA1Q92743 480 aa6.58□□□□□ -1.36
CASP4-208ENST00000530309 MASTLQ96GX5 879 aa6.58□□□□□ -1.36
CASP4-208ENST00000530309 ZNF347Q96SE7 839 aa6.58□□□□□ -1.36
CASP4-208ENST00000530309 HDHD5Q9BXW7 423 aa6.58□□□□□ -1.36
CASP4-208ENST00000530309 KRTAP4-11Q9BYQ6 195 aa6.58□□□□□ -1.36
CASP4-208ENST00000530309 GPR63Q9BZJ6 419 aa6.58□□□□□ -1.36
CASP4-208ENST00000530309 TXNRD2Q9NNW7 524 aa6.58□□□□□ -1.36
CASP4-208ENST00000530309 SLC25A13Q9UJS0 675 aa6.58□□□□□ -1.36
CASP4-208ENST00000530309 GDAQ9Y2T3 454 aa6.58□□□□□ -1.36
CASP4-208ENST00000530309 AFG3L2Q9Y4W6 797 aa6.58□□□□□ -1.36
CASP4-208ENST00000530309 CCDC196A0A1B0GTZ2 297 aa6.57□□□□□ -1.36
CASP4-208ENST00000530309 INPPL1O15357 1258 aa6.57□□□□□ -1.36
CASP4-208ENST00000530309 ANP32CO43423 234 aa6.57□□□□□ -1.36
CASP4-208ENST00000530309 USP12O75317 370 aa6.57□□□□□ -1.36
CASP4-208ENST00000530309 METTL18O95568 372 aa6.57□□□□□ -1.36
CASP4-208ENST00000530309 PLAUP00749 431 aa6.57□□□□□ -1.36
CASP4-208ENST00000530309 PKMP14618 531 aaKnown RBP6.57□□□□□ -1.36
CASP4-208ENST00000530309 ARSAP15289 507 aa6.57□□□□□ -1.36
CASP4-208ENST00000530309 ST6GAL1P15907 406 aa6.57□□□□□ -1.36
CASP4-208ENST00000530309 AVPR2P30518 371 aa6.57□□□□□ -1.36
CASP4-208ENST00000530309 HOXA7P31268 230 aaPredicted RBP6.57□□□□□ -1.36
CASP4-208ENST00000530309 RPS6KA3P51812 740 aa6.57□□□□□ -1.36
CASP4-208ENST00000530309 OAZ1P54368 228 aa6.57□□□□□ -1.36
CASP4-208ENST00000530309 YPEL5P62699 121 aa6.57□□□□□ -1.36
CASP4-208ENST00000530309 SLC10A2Q12908 348 aaPredicted RBP6.57□□□□□ -1.36
CASP4-208ENST00000530309 LIPMQ5VYY2 423 aa6.57□□□□□ -1.36
CASP4-208ENST00000530309 MTFR2Q6P444 385 aa6.57□□□□□ -1.36
CASP4-208ENST00000530309 RTL10Q7L3V2 364 aa6.57□□□□□ -1.36
CASP4-208ENST00000530309 PRIMA1Q86XR5 153 aa6.57□□□□□ -1.36
CASP4-208ENST00000530309 ZFPM2Q8WW38 1151 aa6.57□□□□□ -1.36
CASP4-208ENST00000530309 KAT2BQ92831 832 aa6.57□□□□□ -1.36
CASP4-208ENST00000530309 MAP4K1Q92918 833 aa6.57□□□□□ -1.36
CASP4-208ENST00000530309 HVCN1Q96D96 273 aa6.57□□□□□ -1.36
CASP4-208ENST00000530309 MLXIPLQ9NP71 852 aa6.57□□□□□ -1.36
CASP4-208ENST00000530309 TLR8Q9NR97 1041 aaKnown RBP6.57□□□□□ -1.36
CASP4-208ENST00000530309 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.57□□□□□ -1.36
CASP4-208ENST00000530309 CD207Q9UJ71 328 aa6.57□□□□□ -1.36
CASP4-208ENST00000530309 PKP3Q9Y446 797 aa6.57□□□□□ -1.36
CASP4-208ENST00000530309 PEX12O00623 359 aa6.56□□□□□ -1.36
CASP4-208ENST00000530309 DHX16O60231 1041 aaKnown RBP6.56□□□□□ -1.36
CASP4-208ENST00000530309 CYP4B1P13584 511 aa6.56□□□□□ -1.36
CASP4-208ENST00000530309 CD53P19397 219 aa6.56□□□□□ -1.36
CASP4-208ENST00000530309 RPS6KB1P23443 525 aa6.56□□□□□ -1.36
CASP4-208ENST00000530309 TUBP50607 506 aa6.56□□□□□ -1.36
CASP4-208ENST00000530309 MVDP53602 400 aa6.56□□□□□ -1.36
CASP4-208ENST00000530309 HSF1Q00613 529 aa6.56□□□□□ -1.36
CASP4-208ENST00000530309 GOLGA8FQ08AF8 430 aa6.56□□□□□ -1.36
CASP4-208ENST00000530309 TBL3Q12788 808 aaKnown RBP6.56□□□□□ -1.36
CASP4-208ENST00000530309 GXYLT1Q4G148 440 aa6.56□□□□□ -1.36
CASP4-208ENST00000530309 VPS52Q8N1B4 723 aa6.56□□□□□ -1.36
CASP4-208ENST00000530309 PAQR4Q8N4S7 273 aaPredicted RBP6.56□□□□□ -1.36
CASP4-208ENST00000530309 FAM47BQ8NA70 645 aa6.56□□□□□ -1.36
CASP4-208ENST00000530309 ZG16BQ96DA0 208 aa6.56□□□□□ -1.36
CASP4-208ENST00000530309 ADAD1Q96M93 576 aaKnown RBP6.56□□□□□ -1.36
CASP4-208ENST00000530309 SEC62Q99442 399 aaKnown RBP6.56□□□□□ -1.36
CASP4-208ENST00000530309 STN1Q9H668 368 aaKnown RBP6.56□□□□□ -1.36
CASP4-208ENST00000530309 SUFUQ9UMX1 484 aa6.56□□□□□ -1.36
CASP4-208ENST00000530309 DTX4Q9Y2E6 619 aa6.56□□□□□ -1.36
CASP4-208ENST00000530309 WDR17Q8IZU2 1322 aa6.55□□□□□ -1.36
CASP4-208ENST00000530309 CCNT1O60563 726 aaKnown RBP6.55□□□□□ -1.36
CASP4-208ENST00000530309 WDHD1O75717 1129 aaPredicted RBP6.55□□□□□ -1.36
CASP4-208ENST00000530309 LATS1O95835 1130 aa6.55□□□□□ -1.36
CASP4-208ENST00000530309 WEE2P0C1S8 567 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms