RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 HVCN1Q96D96 273 aa5.12□□□□□ -1.59
C11orf88-204ENST00000529661 KTI12Q96EK9 354 aaPredicted RBP5.12□□□□□ -1.59
C11orf88-204ENST00000529661 KAZALD1Q96I82 304 aa5.12□□□□□ -1.59
C11orf88-204ENST00000529661 REXO5Q96IC2 774 aaKnown RBP5.12□□□□□ -1.59
C11orf88-204ENST00000529661 EIF3CQ99613 913 aaKnown RBP5.12□□□□□ -1.59
C11orf88-204ENST00000529661 SLC26A6Q9BXS9 759 aa5.12□□□□□ -1.59
C11orf88-204ENST00000529661 FBXO28Q9NVF7 368 aa5.12□□□□□ -1.59
C11orf88-204ENST00000529661 TRNAU1APQ9NX07 287 aaKnown RBP5.12□□□□□ -1.59
C11orf88-204ENST00000529661 DNAJC16Q9Y2G8 782 aa5.12□□□□□ -1.59
C11orf88-204ENST00000529661 CCDC187A0A096LP49 1063 aa5.11□□□□□ -1.59
C11orf88-204ENST00000529661 A6NLC8 198 aa5.11□□□□□ -1.59
C11orf88-204ENST00000529661 PPEF2O14830 753 aa5.11□□□□□ -1.59
C11orf88-204ENST00000529661 ALADP13716 330 aa5.11□□□□□ -1.59
C11orf88-204ENST00000529661 ELF1P32519 619 aa5.11□□□□□ -1.59
C11orf88-204ENST00000529661 PTGER1P34995 402 aa5.11□□□□□ -1.59
C11orf88-204ENST00000529661 THBS4P35443 961 aa5.11□□□□□ -1.59
C11orf88-204ENST00000529661 NR1H2P55055 460 aa5.11□□□□□ -1.59
C11orf88-204ENST00000529661 FOXL2P58012 376 aa5.11□□□□□ -1.59
C11orf88-204ENST00000529661 WDR5P61964 334 aaKnown RBP5.11□□□□□ -1.59
C11orf88-204ENST00000529661 CTXN3Q4LDR2 81 aa5.11□□□□□ -1.59
C11orf88-204ENST00000529661 PXDC1Q5TGL8 231 aa5.11□□□□□ -1.59
C11orf88-204ENST00000529661 MAATS1Q7Z4T9 603 aa5.11□□□□□ -1.59
C11orf88-204ENST00000529661 NANOGP1Q8N7R0 232 aa5.11□□□□□ -1.59
C11orf88-204ENST00000529661 SLC2A12Q8TD20 617 aa5.11□□□□□ -1.59
C11orf88-204ENST00000529661 NPAS1Q99742 590 aa5.11□□□□□ -1.59
C11orf88-204ENST00000529661 REEP2Q9BRK0 252 aa5.11□□□□□ -1.59
C11orf88-204ENST00000529661 ZHX3Q9H4I2 956 aa5.11□□□□□ -1.59
C11orf88-204ENST00000529661 ARL8BQ9NVJ2 186 aa5.11□□□□□ -1.59
C11orf88-204ENST00000529661 TERF2IPQ9NYB0 399 aa5.11□□□□□ -1.59
C11orf88-204ENST00000529661 MAP3K20Q9NYL2 800 aaKnown RBP5.11□□□□□ -1.59
C11orf88-204ENST00000529661 ELOVL5Q9NYP7 299 aa5.11□□□□□ -1.59
C11orf88-204ENST00000529661 BAG5Q9UL15 447 aa5.11□□□□□ -1.59
C11orf88-204ENST00000529661 RRP7AQ9Y3A4 280 aaKnown RBP5.11□□□□□ -1.59
C11orf88-204ENST00000529661 PCDHA10Q9Y5I2 948 aa5.11□□□□□ -1.59
C11orf88-204ENST00000529661 CCDC196A0A1B0GTZ2 297 aa5.1□□□□□ -1.59
C11orf88-204ENST00000529661 MBD3L5A6NJ08 208 aaPredicted RBP5.1□□□□□ -1.59
C11orf88-204ENST00000529661 SAC3D1A6NKF1 404 aa5.1□□□□□ -1.59
C11orf88-204ENST00000529661 STX16-NPEPL1H3BU86 382 aa5.1□□□□□ -1.59
C11orf88-204ENST00000529661 STX16O14662 325 aa5.1□□□□□ -1.59
C11orf88-204ENST00000529661 SEPT4O43236 478 aa5.1□□□□□ -1.59
C11orf88-204ENST00000529661 MOSPD3O75425 235 aa5.1□□□□□ -1.59
C11orf88-204ENST00000529661 HEXIM1O94992 359 aaKnown RBP5.1□□□□□ -1.59
C11orf88-204ENST00000529661 TACR3P29371 465 aa5.1□□□□□ -1.59
C11orf88-204ENST00000529661 RXRGP48443 463 aa5.1□□□□□ -1.59
C11orf88-204ENST00000529661 PLCD1P51178 756 aa5.1□□□□□ -1.59
C11orf88-204ENST00000529661 GEMIN4P57678 1058 aaKnown RBP5.1□□□□□ -1.59
C11orf88-204ENST00000529661 FAM3BP58499 235 aaPredicted RBP5.1□□□□□ -1.59
C11orf88-204ENST00000529661 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.1□□□□□ -1.59
C11orf88-204ENST00000529661 LMOD3Q0VAK6 560 aa5.1□□□□□ -1.59
C11orf88-204ENST00000529661 WDR45BQ5MNZ6 344 aa5.1□□□□□ -1.59
C11orf88-204ENST00000529661 HYIQ5T013 277 aa5.1□□□□□ -1.59
C11orf88-204ENST00000529661 ANO7Q6IWH7 933 aa5.1□□□□□ -1.59
C11orf88-204ENST00000529661 SHC4Q6S5L8 630 aa5.1□□□□□ -1.59
C11orf88-204ENST00000529661 C16orf89Q6UX73 402 aa5.1□□□□□ -1.59
C11orf88-204ENST00000529661 GLCCI1Q86VQ1 547 aa5.1□□□□□ -1.59
C11orf88-204ENST00000529661 HEATR4Q86WZ0 1026 aa5.1□□□□□ -1.59
C11orf88-204ENST00000529661 PCYOX1LQ8NBM8 494 aa5.1□□□□□ -1.59
C11orf88-204ENST00000529661 GLMPQ8WWB7 406 aa5.1□□□□□ -1.59
C11orf88-204ENST00000529661 TRMT61AQ96FX7 289 aaKnown RBP5.1□□□□□ -1.59
C11orf88-204ENST00000529661 FAR2Q96K12 515 aa5.1□□□□□ -1.59
C11orf88-204ENST00000529661 FCRL4Q96PJ5 515 aa5.1□□□□□ -1.59
C11orf88-204ENST00000529661 NUAK2Q9H093 628 aa5.1□□□□□ -1.59
C11orf88-204ENST00000529661 JMJD4Q9H9V9 463 aa5.1□□□□□ -1.59
C11orf88-204ENST00000529661 PLEKHA2Q9HB19 425 aa5.1□□□□□ -1.59
C11orf88-204ENST00000529661 SLC12A4Q9UP95 1085 aa5.1□□□□□ -1.59
C11orf88-204ENST00000529661 ITIH6Q6UXX5 1313 aa5.09□□□□□ -1.59
C11orf88-204ENST00000529661 VWA3AA6NCI4 1184 aa5.09□□□□□ -1.59
C11orf88-204ENST00000529661 HNRNPRO43390 633 aaKnown RBP5.09□□□□□ -1.59
C11orf88-204ENST00000529661 TSPAN3O60637 253 aa5.09□□□□□ -1.59
C11orf88-204ENST00000529661 MBD4O95243 580 aa5.09□□□□□ -1.59
C11orf88-204ENST00000529661 CD4P01730 458 aa5.09□□□□□ -1.59
C11orf88-204ENST00000529661 MBPP02686 304 aaPredicted RBP5.09□□□□□ -1.59
C11orf88-204ENST00000529661 SLC3A2P08195 630 aaKnown RBP5.09□□□□□ -1.59
C11orf88-204ENST00000529661 CYP19A1P11511 503 aaPredicted RBP5.09□□□□□ -1.59
C11orf88-204ENST00000529661 HOXD9P28356 352 aaPredicted RBP5.09□□□□□ -1.59
C11orf88-204ENST00000529661 IGHMBP2P38935 993 aaKnown RBP5.09□□□□□ -1.59
C11orf88-204ENST00000529661 LIFRP42702 1097 aa5.09□□□□□ -1.59
C11orf88-204ENST00000529661 TLE3Q04726 772 aa5.09□□□□□ -1.59
C11orf88-204ENST00000529661 PDCLQ13371 301 aa5.09□□□□□ -1.59
C11orf88-204ENST00000529661 CNGA3Q16281 694 aa5.09□□□□□ -1.59
C11orf88-204ENST00000529661 ZNF484Q5JVG2 852 aa5.09□□□□□ -1.59
C11orf88-204ENST00000529661 ANKRD40Q6AI12 368 aa5.09□□□□□ -1.59
C11orf88-204ENST00000529661 C1orf122Q6ZSJ8 110 aa5.09□□□□□ -1.59
C11orf88-204ENST00000529661 RSRC2Q7L4I2 434 aaKnown RBP5.09□□□□□ -1.59
C11orf88-204ENST00000529661 PCGF5Q86SE9 256 aa5.09□□□□□ -1.59
C11orf88-204ENST00000529661 PTGR2Q8N8N7 351 aaPredicted RBP5.09□□□□□ -1.59
C11orf88-204ENST00000529661 OR52L2PQ8NGH6 319 aa5.09□□□□□ -1.59
C11orf88-204ENST00000529661 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.09□□□□□ -1.59
C11orf88-204ENST00000529661 PIGSQ96S52 555 aa5.09□□□□□ -1.59
C11orf88-204ENST00000529661 GPR63Q9BZJ6 419 aa5.09□□□□□ -1.59
C11orf88-204ENST00000529661 ABHD10Q9NUJ1 306 aa5.09□□□□□ -1.59
C11orf88-204ENST00000529661 RCE1Q9Y256 329 aa5.09□□□□□ -1.59
C11orf88-204ENST00000529661 AFG3L2Q9Y4W6 797 aa5.09□□□□□ -1.59
C11orf88-204ENST00000529661 HEMK1Q9Y5R4 338 aaPredicted RBP5.09□□□□□ -1.59
C11orf88-204ENST00000529661 CYP3A7-CYP3A51PA0A087WV96 503 aa5.08□□□□□ -1.6
C11orf88-204ENST00000529661 TBC1D3DA0A087WVF3 549 aa5.08□□□□□ -1.6
C11orf88-204ENST00000529661 TBC1D3IA0A087WXS9 549 aa5.08□□□□□ -1.6
C11orf88-204ENST00000529661 TBC1D3EA0A087X179 549 aa5.08□□□□□ -1.6
C11orf88-204ENST00000529661 TBC1D3KA0A087X1G2 549 aa5.08□□□□□ -1.6
C11orf88-204ENST00000529661 TBC1D3BA6NDS4 549 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms