RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 MFN1Q8IWA4 741 aa9.34□□□□□ -0.91
VPS11-203ENST00000529545 UNC45BQ8IWX7 931 aa9.34□□□□□ -0.91
VPS11-203ENST00000529545 DHX40Q8IX18 779 aaKnown RBP9.34□□□□□ -0.91
VPS11-203ENST00000529545 CEP57L1Q8IYX8 460 aa9.34□□□□□ -0.91
VPS11-203ENST00000529545 LSMEM2Q8N112 164 aa9.34□□□□□ -0.91
VPS11-203ENST00000529545 SIX6OS1Q8N1H7 587 aa9.34□□□□□ -0.91
VPS11-203ENST00000529545 ANKRD52Q8NB46 1076 aa9.34□□□□□ -0.91
VPS11-203ENST00000529545 OR14C36Q8NHC7 312 aa9.34□□□□□ -0.91
VPS11-203ENST00000529545 TAS1R2Q8TE23 839 aa9.34□□□□□ -0.91
VPS11-203ENST00000529545 RFFLQ8WZ73 363 aa9.34□□□□□ -0.91
VPS11-203ENST00000529545 ZNF578Q96N58 590 aaPredicted RBP9.34□□□□□ -0.91
VPS11-203ENST00000529545 DDX50Q9BQ39 737 aaKnown RBP9.34□□□□□ -0.91
VPS11-203ENST00000529545 ULBP1Q9BZM6 244 aa9.34□□□□□ -0.91
VPS11-203ENST00000529545 MTG2Q9H4K7 406 aa9.34□□□□□ -0.91
VPS11-203ENST00000529545 MMRN2Q9H8L6 949 aa9.34□□□□□ -0.91
VPS11-203ENST00000529545 APOBEC3GQ9HC16 384 aaKnown RBP9.34□□□□□ -0.91
VPS11-203ENST00000529545 ABCC13Q9NSE7 274 aa9.34□□□□□ -0.91
VPS11-203ENST00000529545 STIM2Q9P246 746 aa9.34□□□□□ -0.91
VPS11-203ENST00000529545 HESX1Q9UBX0 185 aa9.34□□□□□ -0.91
VPS11-203ENST00000529545 SFMBT1Q9UHJ3 866 aa9.34□□□□□ -0.91
VPS11-203ENST00000529545 STOML2Q9UJZ1 356 aa9.34□□□□□ -0.91
VPS11-203ENST00000529545 CEP83Q9Y592 693 aa9.34□□□□□ -0.91
VPS11-203ENST00000529545 TENM4Q6N022 2769 aa9.33□□□□□ -0.92
VPS11-203ENST00000529545 TBC1D3DA0A087WVF3 549 aa9.33□□□□□ -0.92
VPS11-203ENST00000529545 TBC1D3IA0A087WXS9 549 aa9.33□□□□□ -0.92
VPS11-203ENST00000529545 TBC1D3EA0A087X179 549 aa9.33□□□□□ -0.92
VPS11-203ENST00000529545 TBC1D3KA0A087X1G2 549 aa9.33□□□□□ -0.92
VPS11-203ENST00000529545 EDDM13A0A1B0GTR0 161 aa9.33□□□□□ -0.92
VPS11-203ENST00000529545 A0A1W2PR77 199 aa9.33□□□□□ -0.92
VPS11-203ENST00000529545 TBC1D3FA6NER0 549 aaPredicted RBP9.33□□□□□ -0.92
VPS11-203ENST00000529545 TBC1D3LB9A6J9 549 aa9.33□□□□□ -0.92
VPS11-203ENST00000529545 YEATS4O95619 227 aa9.33□□□□□ -0.92
VPS11-203ENST00000529545 MT-CO3P00414 261 aa9.33□□□□□ -0.92
VPS11-203ENST00000529545 TBC1D3HP0C7X1 549 aa9.33□□□□□ -0.92
VPS11-203ENST00000529545 PDIA4P13667 645 aaKnown RBP9.33□□□□□ -0.92
VPS11-203ENST00000529545 GOT1P17174 413 aa9.33□□□□□ -0.92
VPS11-203ENST00000529545 C5AR1P21730 350 aa9.33□□□□□ -0.92
VPS11-203ENST00000529545 ACP1P24666 158 aa9.33□□□□□ -0.92
VPS11-203ENST00000529545 NUDT1P36639 197 aa9.33□□□□□ -0.92
VPS11-203ENST00000529545 NNMTP40261 264 aa9.33□□□□□ -0.92
VPS11-203ENST00000529545 GCGRP47871 477 aa9.33□□□□□ -0.92
VPS11-203ENST00000529545 DAB2P98082 770 aa9.33□□□□□ -0.92
VPS11-203ENST00000529545 INSM1Q01101 510 aaPredicted RBP9.33□□□□□ -0.92
VPS11-203ENST00000529545 OVGP1Q12889 678 aa9.33□□□□□ -0.92
VPS11-203ENST00000529545 BNIP3Q12983 259 aa9.33□□□□□ -0.92
VPS11-203ENST00000529545 STK4Q13043 487 aa9.33□□□□□ -0.92
VPS11-203ENST00000529545 CDH18Q13634 790 aa9.33□□□□□ -0.92
VPS11-203ENST00000529545 KCNJ12Q14500 433 aa9.33□□□□□ -0.92
VPS11-203ENST00000529545 STAT4Q14765 748 aa9.33□□□□□ -0.92
VPS11-203ENST00000529545 PIK3R6Q5UE93 754 aa9.33□□□□□ -0.92
VPS11-203ENST00000529545 SFMBT2Q5VUG0 894 aa9.33□□□□□ -0.92
VPS11-203ENST00000529545 BSPRYQ5W0U4 402 aa9.33□□□□□ -0.92
VPS11-203ENST00000529545 NUGGCQ68CJ6 796 aa9.33□□□□□ -0.92
VPS11-203ENST00000529545 ARHGAP17Q68EM7 881 aa9.33□□□□□ -0.92
VPS11-203ENST00000529545 TBC1D3GQ6DHY5 549 aa9.33□□□□□ -0.92
VPS11-203ENST00000529545 TBC1D3CQ6IPX1 549 aa9.33□□□□□ -0.92
VPS11-203ENST00000529545 NAPEPLDQ6IQ20 393 aa9.33□□□□□ -0.92
VPS11-203ENST00000529545 RFWD3Q6PCD5 774 aa9.33□□□□□ -0.92
VPS11-203ENST00000529545 SHC4Q6S5L8 630 aa9.33□□□□□ -0.92
VPS11-203ENST00000529545 KDM7AQ6ZMT4 941 aa9.33□□□□□ -0.92
VPS11-203ENST00000529545 ERICH1Q86X53 443 aa9.33□□□□□ -0.92
VPS11-203ENST00000529545 ZC3H3Q8IXZ2 948 aaKnown RBP9.33□□□□□ -0.92
VPS11-203ENST00000529545 TBC1D3Q8IZP1 549 aaPredicted RBP9.33□□□□□ -0.92
VPS11-203ENST00000529545 DCBLD1Q8N8Z6 715 aa9.33□□□□□ -0.92
VPS11-203ENST00000529545 MFSD2AQ8NA29 543 aa9.33□□□□□ -0.92
VPS11-203ENST00000529545 KDM1BQ8NB78 822 aa9.33□□□□□ -0.92
VPS11-203ENST00000529545 HJURPQ8NCD3 748 aaPredicted RBP9.33□□□□□ -0.92
VPS11-203ENST00000529545 FIBINQ8TAL6 211 aa9.33□□□□□ -0.92
VPS11-203ENST00000529545 EDEM1Q92611 657 aa9.33□□□□□ -0.92
VPS11-203ENST00000529545 TTC17Q96AE7 1141 aa9.33□□□□□ -0.92
VPS11-203ENST00000529545 NAF1Q96HR8 494 aaKnown RBP9.33□□□□□ -0.92
VPS11-203ENST00000529545 FAXDC2Q96IV6 333 aa9.33□□□□□ -0.92
VPS11-203ENST00000529545 CLMPQ9H6B4 373 aa9.33□□□□□ -0.92
VPS11-203ENST00000529545 EBF2Q9HAK2 575 aa9.33□□□□□ -0.92
VPS11-203ENST00000529545 SERGEFQ9UGK8 458 aa9.33□□□□□ -0.92
VPS11-203ENST00000529545 MTMR6Q9Y217 621 aa9.33□□□□□ -0.92
VPS11-203ENST00000529545 CFAP46Q8IYW2 2715 aa9.33□□□□□ -0.92
VPS11-203ENST00000529545 XPO1O14980 1071 aaKnown RBP9.32□□□□□ -0.92
VPS11-203ENST00000529545 MSI1O43347 362 aaKnown RBP9.32□□□□□ -0.92
VPS11-203ENST00000529545 ACSL4O60488 711 aa9.32□□□□□ -0.92
VPS11-203ENST00000529545 IL1BP01584 269 aa9.32□□□□□ -0.92
VPS11-203ENST00000529545 SRPRAP08240 638 aaKnown RBP9.32□□□□□ -0.92
VPS11-203ENST00000529545 TRIM49P0CI25 452 aa9.32□□□□□ -0.92
VPS11-203ENST00000529545 TRIM49CP0CI26 452 aa9.32□□□□□ -0.92
VPS11-203ENST00000529545 RPL13P26373 211 aaKnown RBP9.32□□□□□ -0.92
VPS11-203ENST00000529545 CSKP41240 450 aa9.32□□□□□ -0.92
VPS11-203ENST00000529545 PSMD8P48556 350 aa9.32□□□□□ -0.92
VPS11-203ENST00000529545 SGSHP51688 502 aa9.32□□□□□ -0.92
VPS11-203ENST00000529545 RAD23BP54727 409 aa9.32□□□□□ -0.92
VPS11-203ENST00000529545 ENPEPQ07075 957 aa9.32□□□□□ -0.92
VPS11-203ENST00000529545 ADIGQ0VDE8 80 aa9.32□□□□□ -0.92
VPS11-203ENST00000529545 ZNF211Q13398 564 aaPredicted RBP9.32□□□□□ -0.92
VPS11-203ENST00000529545 ARID5BQ14865 1188 aa9.32□□□□□ -0.92
VPS11-203ENST00000529545 GOLGA7BQ2TAP0 167 aa9.32□□□□□ -0.92
VPS11-203ENST00000529545 PKDCCQ504Y2 493 aa9.32□□□□□ -0.92
VPS11-203ENST00000529545 SGO2Q562F6 1265 aa9.32□□□□□ -0.92
VPS11-203ENST00000529545 C1orf220Q5T0J3 134 aa9.32□□□□□ -0.92
VPS11-203ENST00000529545 ARHGAP40Q5TG30 622 aa9.32□□□□□ -0.92
VPS11-203ENST00000529545 KRT39Q6A163 491 aa9.32□□□□□ -0.92
VPS11-203ENST00000529545 IQCHQ86VS3 1027 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms