RNA–Protein interactions for RNA: ENST00000527149.5

SMCO4-204, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCO4, Length 472 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-204ENST00000527149 TMEM105Q8N8V8 129 aa17.14■□□□□ 0.33
SMCO4-204ENST00000527149 LRRC57Q8N9N7 239 aa17.14■□□□□ 0.33
SMCO4-204ENST00000527149 FAM71BQ8TC56 605 aa17.14■□□□□ 0.33
SMCO4-204ENST00000527149 TSC1Q92574 1164 aa17.14■□□□□ 0.33
SMCO4-204ENST00000527149 PBXIP1Q96AQ6 731 aa17.14■□□□□ 0.33
SMCO4-204ENST00000527149 TBC1D31Q96DN5 1066 aa17.14■□□□□ 0.33
SMCO4-204ENST00000527149 ZYG11BQ9C0D3 744 aa17.14■□□□□ 0.33
SMCO4-204ENST00000527149 DHX35Q9H5Z1 703 aaKnown RBP17.14■□□□□ 0.33
SMCO4-204ENST00000527149 ZWILCHQ9H900 591 aa17.14■□□□□ 0.33
SMCO4-204ENST00000527149 ABCB8Q9NUT2 735 aa17.14■□□□□ 0.33
SMCO4-204ENST00000527149 INTS6Q9UL03 887 aaKnown RBP17.14■□□□□ 0.33
SMCO4-204ENST00000527149 TBC1D30Q9Y2I9 924 aa17.14■□□□□ 0.33
SMCO4-204ENST00000527149 HYOU1Q9Y4L1 999 aa17.14■□□□□ 0.33
SMCO4-204ENST00000527149 GRID2IPA4D2P6 1211 aa17.13■□□□□ 0.33
SMCO4-204ENST00000527149 PRR33A8MZF0 331 aa17.13■□□□□ 0.33
SMCO4-204ENST00000527149 BUB1O43683 1085 aa17.13■□□□□ 0.33
SMCO4-204ENST00000527149 SRGAP2O75044 1071 aa17.13■□□□□ 0.33
SMCO4-204ENST00000527149 APODP05090 189 aa17.13■□□□□ 0.33
SMCO4-204ENST00000527149 PABPC1P11940 636 aaKnown RBP17.13■□□□□ 0.33
SMCO4-204ENST00000527149 HTR7P34969 479 aa17.13■□□□□ 0.33
SMCO4-204ENST00000527149 KIR2DL1P43626 348 aaPredicted RBP17.13■□□□□ 0.33
SMCO4-204ENST00000527149 NOP2P46087 812 aaKnown RBP17.13■□□□□ 0.33
SMCO4-204ENST00000527149 RPS9P46781 194 aaKnown RBP17.13■□□□□ 0.33
SMCO4-204ENST00000527149 FUT11Q495W5 492 aa17.13■□□□□ 0.33
SMCO4-204ENST00000527149 ZNF662Q6ZS27 426 aa17.13■□□□□ 0.33
SMCO4-204ENST00000527149 POLNQ7Z5Q5 900 aa17.13■□□□□ 0.33
SMCO4-204ENST00000527149 TFAP2DQ7Z6R9 452 aa17.13■□□□□ 0.33
SMCO4-204ENST00000527149 ADIPOR2Q86V24 386 aa17.13■□□□□ 0.33
SMCO4-204ENST00000527149 ZNF557Q8N988 423 aaPredicted RBP17.13■□□□□ 0.33
SMCO4-204ENST00000527149 EXOC4Q96A65 974 aa17.13■□□□□ 0.33
SMCO4-204ENST00000527149 ALG14Q96F25 216 aa17.13■□□□□ 0.33
SMCO4-204ENST00000527149 ZNF830Q96NB3 372 aaPredicted RBP17.13■□□□□ 0.33
SMCO4-204ENST00000527149 EPAS1Q99814 870 aa17.13■□□□□ 0.33
SMCO4-204ENST00000527149 CHRDQ9H2X0 955 aa17.13■□□□□ 0.33
SMCO4-204ENST00000527149 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.13■□□□□ 0.33
SMCO4-204ENST00000527149 NDFIP2Q9NV92 336 aa17.13■□□□□ 0.33
SMCO4-204ENST00000527149 GGA2Q9UJY4 613 aa17.13■□□□□ 0.33
SMCO4-204ENST00000527149 STARD13Q9Y3M8 1113 aa17.13■□□□□ 0.33
SMCO4-204ENST00000527149 SIT1Q9Y3P8 196 aa17.13■□□□□ 0.33
SMCO4-204ENST00000527149 OR51B4Q9Y5P0 310 aa17.13■□□□□ 0.33
SMCO4-204ENST00000527149 RNF40O75150 1001 aa17.12■□□□□ 0.33
SMCO4-204ENST00000527149 DCNP07585 359 aaKnown RBP17.12■□□□□ 0.33
SMCO4-204ENST00000527149 CCDC175P0C221 793 aa17.12■□□□□ 0.33
SMCO4-204ENST00000527149 RHOQP17081 205 aa17.12■□□□□ 0.33
SMCO4-204ENST00000527149 COMTP21964 271 aa17.12■□□□□ 0.33
SMCO4-204ENST00000527149 SLC1A1P43005 524 aa17.12■□□□□ 0.33
SMCO4-204ENST00000527149 KIF5AQ12840 1032 aa17.12■□□□□ 0.33
SMCO4-204ENST00000527149 DPYSQ14117 519 aa17.12■□□□□ 0.33
SMCO4-204ENST00000527149 LRRC32Q14392 662 aa17.12■□□□□ 0.33
SMCO4-204ENST00000527149 ATP13A4Q4VNC1 1196 aa17.12■□□□□ 0.33
SMCO4-204ENST00000527149 DGKKQ5KSL6 1271 aa17.12■□□□□ 0.33
SMCO4-204ENST00000527149 LRRC38Q5VT99 294 aa17.12■□□□□ 0.33
SMCO4-204ENST00000527149 PKN3Q6P5Z2 889 aa17.12■□□□□ 0.33
SMCO4-204ENST00000527149 HSPH1Q92598 858 aa17.12■□□□□ 0.33
SMCO4-204ENST00000527149 CALR3Q96L12 384 aaKnown RBP17.12■□□□□ 0.33
SMCO4-204ENST00000527149 LMAN1LQ9HAT1 526 aa17.12■□□□□ 0.33
SMCO4-204ENST00000527149 PCDH18Q9HCL0 1135 aa17.12■□□□□ 0.33
SMCO4-204ENST00000527149 TMEM248Q9NWD8 314 aa17.12■□□□□ 0.33
SMCO4-204ENST00000527149 ALG6Q9Y672 507 aa17.12■□□□□ 0.33
SMCO4-204ENST00000527149 CAPN6Q9Y6Q1 641 aa17.12■□□□□ 0.33
SMCO4-204ENST00000527149 NUP205Q92621 2012 aa17.12■□□□□ 0.33
SMCO4-204ENST00000527149 CKAP5Q14008 2032 aa17.11■□□□□ 0.33
SMCO4-204ENST00000527149 TBC1D3BA6NDS4 549 aa17.11■□□□□ 0.33
SMCO4-204ENST00000527149 WASH4PA8MWX3 477 aa17.11■□□□□ 0.33
SMCO4-204ENST00000527149 CREB3O43889 395 aa17.11■□□□□ 0.33
SMCO4-204ENST00000527149 PTMAP06454 111 aaKnown RBP17.11■□□□□ 0.33
SMCO4-204ENST00000527149 CD48P09326 243 aa17.11■□□□□ 0.33
SMCO4-204ENST00000527149 GOT1P17174 413 aa17.11■□□□□ 0.33
SMCO4-204ENST00000527149 IL4RP24394 825 aa17.11■□□□□ 0.33
SMCO4-204ENST00000527149 MZF1P28698 734 aaPredicted RBP17.11■□□□□ 0.33
SMCO4-204ENST00000527149 CSKP41240 450 aa17.11■□□□□ 0.33
SMCO4-204ENST00000527149 TNFRSF4P43489 277 aa17.11■□□□□ 0.33
SMCO4-204ENST00000527149 TPI1P60174 286 aa17.11■□□□□ 0.33
SMCO4-204ENST00000527149 EIF4HQ15056 248 aaKnown RBP17.11■□□□□ 0.33
SMCO4-204ENST00000527149 HADHQ16836 314 aaKnown RBP17.11■□□□□ 0.33
SMCO4-204ENST00000527149 PLEKHG6Q3KR16 790 aa17.11■□□□□ 0.33
SMCO4-204ENST00000527149 FBXO43Q4G163 708 aa17.11■□□□□ 0.33
SMCO4-204ENST00000527149 PREPLQ4J6C6 727 aaPredicted RBP17.11■□□□□ 0.33
SMCO4-204ENST00000527149 PPP6R3Q5H9R7 873 aaPredicted RBP17.11■□□□□ 0.33
SMCO4-204ENST00000527149 TMEM31Q5JXX7 168 aa17.11■□□□□ 0.33
SMCO4-204ENST00000527149 EMC10Q5UCC4 262 aa17.11■□□□□ 0.33
SMCO4-204ENST00000527149 RWDD4Q6NW29 188 aaKnown RBP17.11■□□□□ 0.33
SMCO4-204ENST00000527149 SETD3Q86TU7 594 aaPredicted RBP17.11■□□□□ 0.33
SMCO4-204ENST00000527149 AHI1Q8N157 1196 aa17.11■□□□□ 0.33
SMCO4-204ENST00000527149 TXLNBQ8N3L3 684 aa17.11■□□□□ 0.33
SMCO4-204ENST00000527149 SYNPOQ8N3V7 929 aa17.11■□□□□ 0.33
SMCO4-204ENST00000527149 RTL3Q8N8U3 475 aaKnown RBP17.11■□□□□ 0.33
SMCO4-204ENST00000527149 WFIKKN2Q8TEU8 576 aa17.11■□□□□ 0.33
SMCO4-204ENST00000527149 USP33Q8TEY7 942 aa17.11■□□□□ 0.33
SMCO4-204ENST00000527149 C1QTNF1Q9BXJ1 281 aa17.11■□□□□ 0.33
SMCO4-204ENST00000527149 RETREG1Q9H6L5 497 aa17.11■□□□□ 0.33
SMCO4-204ENST00000527149 NOL6Q9H6R4 1146 aaKnown RBP17.11■□□□□ 0.33
SMCO4-204ENST00000527149 KLHL11Q9NVR0 708 aa17.11■□□□□ 0.33
SMCO4-204ENST00000527149 CWC15Q9P013 229 aaKnown RBP17.11■□□□□ 0.33
SMCO4-204ENST00000527149 PPP2R2CQ9Y2T4 447 aa17.11■□□□□ 0.33
SMCO4-204ENST00000527149 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.1■□□□□ 0.33
SMCO4-204ENST00000527149 MACROD2A1Z1Q3 448 aa17.1■□□□□ 0.33
SMCO4-204ENST00000527149 H0Y626 953 aa17.1■□□□□ 0.33
SMCO4-204ENST00000527149 EEF2KO00418 725 aaKnown RBP17.1■□□□□ 0.33
SMCO4-204ENST00000527149 STK25O00506 426 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms