RNA–Protein interactions for RNA: ENST00000526271.2

CPSF1-201, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-201ENST00000526271 CETN3O15182 167 aa14.79□□□□□ -0.04
CPSF1-201ENST00000526271 IGLV3-25P01717 112 aa14.79□□□□□ -0.04
CPSF1-201ENST00000526271 EPB41P11171 864 aaKnown RBP14.79□□□□□ -0.04
CPSF1-201ENST00000526271 CD44P16070 742 aaKnown RBP14.79□□□□□ -0.04
CPSF1-201ENST00000526271 IRAK1P51617 712 aa14.79□□□□□ -0.04
CPSF1-201ENST00000526271 ADPRHP54922 357 aa14.79□□□□□ -0.04
CPSF1-201ENST00000526271 TBX4P57082 545 aa14.79□□□□□ -0.04
CPSF1-201ENST00000526271 SUZ12Q15022 739 aaKnown RBP14.79□□□□□ -0.04
CPSF1-201ENST00000526271 CNGA2Q16280 664 aa14.79□□□□□ -0.04
CPSF1-201ENST00000526271 COBLL1Q53SF7 1204 aa14.79□□□□□ -0.04
CPSF1-201ENST00000526271 DCAF6Q58WW2 860 aa14.79□□□□□ -0.04
CPSF1-201ENST00000526271 SFMBT2Q5VUG0 894 aa14.79□□□□□ -0.04
CPSF1-201ENST00000526271 FBXL19Q6PCT2 694 aa14.79□□□□□ -0.04
CPSF1-201ENST00000526271 TMEM270Q6UE05 265 aa14.79□□□□□ -0.04
CPSF1-201ENST00000526271 PCSK4Q6UW60 755 aa14.79□□□□□ -0.04
CPSF1-201ENST00000526271 TAC4Q86UU9 113 aa14.79□□□□□ -0.04
CPSF1-201ENST00000526271 ARHGEF19Q8IW93 802 aa14.79□□□□□ -0.04
CPSF1-201ENST00000526271 MFN1Q8IWA4 741 aa14.79□□□□□ -0.04
CPSF1-201ENST00000526271 STK40Q8N2I9 435 aa14.79□□□□□ -0.04
CPSF1-201ENST00000526271 GALNT15Q8N3T1 639 aa14.79□□□□□ -0.04
CPSF1-201ENST00000526271 PDCD7Q8N8D1 485 aaKnown RBP14.79□□□□□ -0.04
CPSF1-201ENST00000526271 SPATA20Q8TB22 786 aa14.79□□□□□ -0.04
CPSF1-201ENST00000526271 IRGQQ8WZA9 623 aa14.79□□□□□ -0.04
CPSF1-201ENST00000526271 KREMEN1Q96MU8 473 aa14.79□□□□□ -0.04
CPSF1-201ENST00000526271 HESX1Q9UBX0 185 aa14.79□□□□□ -0.04
CPSF1-201ENST00000526271 TJP2Q9UDY2 1190 aa14.79□□□□□ -0.04
CPSF1-201ENST00000526271 SUN2Q9UH99 717 aa14.79□□□□□ -0.04
CPSF1-201ENST00000526271 SARDHQ9UL12 918 aa14.79□□□□□ -0.04
CPSF1-201ENST00000526271 ENC1O14682 589 aa14.78□□□□□ -0.04
CPSF1-201ENST00000526271 SLC16A3O15427 465 aaKnown RBP14.78□□□□□ -0.04
CPSF1-201ENST00000526271 LATO43561 262 aa14.78□□□□□ -0.04
CPSF1-201ENST00000526271 LUC7L3O95232 432 aaKnown RBP14.78□□□□□ -0.04
CPSF1-201ENST00000526271 ATP5BP06576 529 aaKnown RBP14.78□□□□□ -0.04
CPSF1-201ENST00000526271 EPHA8P29322 1005 aaPredicted RBP14.78□□□□□ -0.04
CPSF1-201ENST00000526271 SLC8A1P32418 973 aa14.78□□□□□ -0.04
CPSF1-201ENST00000526271 GPD2P43304 727 aa14.78□□□□□ -0.04
CPSF1-201ENST00000526271 FMO5P49326 533 aa14.78□□□□□ -0.04
CPSF1-201ENST00000526271 NXPH1P58417 271 aa14.78□□□□□ -0.04
CPSF1-201ENST00000526271 TTC31Q49AM3 519 aaPredicted RBP14.78□□□□□ -0.04
CPSF1-201ENST00000526271 TCERG1LQ5VWI1 586 aa14.78□□□□□ -0.04
CPSF1-201ENST00000526271 FMR1NBQ8N0W7 255 aaPredicted RBP14.78□□□□□ -0.04
CPSF1-201ENST00000526271 CARNMT1Q8N4J0 409 aa14.78□□□□□ -0.04
CPSF1-201ENST00000526271 HJURPQ8NCD3 748 aaPredicted RBP14.78□□□□□ -0.04
CPSF1-201ENST00000526271 OR2T34Q8NGX1 318 aa14.78□□□□□ -0.04
CPSF1-201ENST00000526271 FRS2Q8WU20 508 aa14.78□□□□□ -0.04
CPSF1-201ENST00000526271 GOLGA1Q92805 767 aa14.78□□□□□ -0.04
CPSF1-201ENST00000526271 ALG14Q96F25 216 aa14.78□□□□□ -0.04
CPSF1-201ENST00000526271 RPL10LQ96L21 214 aaKnown RBP14.78□□□□□ -0.04
CPSF1-201ENST00000526271 PRMT1Q99873 361 aaKnown RBP14.78□□□□□ -0.04
CPSF1-201ENST00000526271 MIS12Q9H081 205 aa14.78□□□□□ -0.04
CPSF1-201ENST00000526271 PRORYQ9H606 182 aa14.78□□□□□ -0.04
CPSF1-201ENST00000526271 ACP6Q9NPH0 428 aa14.78□□□□□ -0.04
CPSF1-201ENST00000526271 FTSJ1Q9UET6 329 aa14.78□□□□□ -0.04
CPSF1-201ENST00000526271 CA5BQ9Y2D0 317 aa14.78□□□□□ -0.04
CPSF1-201ENST00000526271 M0QYV0 167 aa14.77□□□□□ -0.05
CPSF1-201ENST00000526271 IRAK2O43187 625 aa14.77□□□□□ -0.05
CPSF1-201ENST00000526271 PAEPP09466 180 aa14.77□□□□□ -0.05
CPSF1-201ENST00000526271 BMP6P22004 513 aa14.77□□□□□ -0.05
CPSF1-201ENST00000526271 MZF1P28698 734 aaPredicted RBP14.77□□□□□ -0.05
CPSF1-201ENST00000526271 CD38P28907 300 aa14.77□□□□□ -0.05
CPSF1-201ENST00000526271 PSMD8P48556 350 aa14.77□□□□□ -0.05
CPSF1-201ENST00000526271 SLC8A3P57103 927 aa14.77□□□□□ -0.05
CPSF1-201ENST00000526271 KRT85P78386 507 aa14.77□□□□□ -0.05
CPSF1-201ENST00000526271 TARDBPQ13148 414 aaKnown RBP eCLIP14.77□□□□□ -0.05
CPSF1-201ENST00000526271 E2F5Q15329 346 aa14.77□□□□□ -0.05
CPSF1-201ENST00000526271 NUGGCQ68CJ6 796 aa14.77□□□□□ -0.05
CPSF1-201ENST00000526271 DENND1BQ6P3S1 775 aa14.77□□□□□ -0.05
CPSF1-201ENST00000526271 TMPRSS12Q86WS5 348 aa14.77□□□□□ -0.05
CPSF1-201ENST00000526271 CIR1Q86X95 450 aaPredicted RBP14.77□□□□□ -0.05
CPSF1-201ENST00000526271 EID2Q8N6I1 236 aa14.77□□□□□ -0.05
CPSF1-201ENST00000526271 ENGASEQ8NFI3 743 aa14.77□□□□□ -0.05
CPSF1-201ENST00000526271 PIP4K2CQ8TBX8 421 aa14.77□□□□□ -0.05
CPSF1-201ENST00000526271 CNDP2Q96KP4 475 aaKnown RBP14.77□□□□□ -0.05
CPSF1-201ENST00000526271 ACE2Q9BYF1 805 aaPredicted RBP14.77□□□□□ -0.05
CPSF1-201ENST00000526271 IRX2Q9BZI1 471 aaPredicted RBP14.77□□□□□ -0.05
CPSF1-201ENST00000526271 PCDHGA1Q9Y5H4 931 aa14.77□□□□□ -0.05
CPSF1-201ENST00000526271 RNASEH2AO75792 299 aaKnown RBP14.76□□□□□ -0.05
CPSF1-201ENST00000526271 EIF2S3P41091 472 aaKnown RBP14.76□□□□□ -0.05
CPSF1-201ENST00000526271 SLC11A2P49281 568 aa14.76□□□□□ -0.05
CPSF1-201ENST00000526271 CCR5P51681 352 aa14.76□□□□□ -0.05
CPSF1-201ENST00000526271 TAF5Q15542 800 aa14.76□□□□□ -0.05
CPSF1-201ENST00000526271 ZC3H12AQ5D1E8 599 aaKnown RBP14.76□□□□□ -0.05
CPSF1-201ENST00000526271 ARTNQ5T4W7 220 aa14.76□□□□□ -0.05
CPSF1-201ENST00000526271 HES3Q5TGS1 186 aa14.76□□□□□ -0.05
CPSF1-201ENST00000526271 ZNF658Q5TYW1 1059 aaPredicted RBP14.76□□□□□ -0.05
CPSF1-201ENST00000526271 RAP1GAP2Q684P5 730 aa14.76□□□□□ -0.05
CPSF1-201ENST00000526271 CXorf57Q6NSI4 855 aaKnown RBP14.76□□□□□ -0.05
CPSF1-201ENST00000526271 RRAGAQ7L523 313 aa14.76□□□□□ -0.05
CPSF1-201ENST00000526271 ADAT2Q7Z6V5 191 aaKnown RBP14.76□□□□□ -0.05
CPSF1-201ENST00000526271 UNC45BQ8IWX7 931 aa14.76□□□□□ -0.05
CPSF1-201ENST00000526271 KDM1BQ8NB78 822 aa14.76□□□□□ -0.05
CPSF1-201ENST00000526271 HSFY1Q96LI6 401 aa14.76□□□□□ -0.05
CPSF1-201ENST00000526271 DCBLD2Q96PD2 775 aa14.76□□□□□ -0.05
CPSF1-201ENST00000526271 KIAA1257Q9ULG3 409 aa14.76□□□□□ -0.05
CPSF1-201ENST00000526271 FZD4Q9ULV1 537 aa14.76□□□□□ -0.05
CPSF1-201ENST00000526271 CNTN6Q9UQ52 1028 aa14.76□□□□□ -0.05
CPSF1-201ENST00000526271 TLR6Q9Y2C9 796 aa14.76□□□□□ -0.05
CPSF1-201ENST00000526271 PCDHB4Q9Y5E5 795 aa14.76□□□□□ -0.05
CPSF1-201ENST00000526271 TARSL2A2RTX5 802 aaKnown RBP14.75□□□□□ -0.05
CPSF1-201ENST00000526271 TLR4O00206 839 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms