RNA–Protein interactions for RNA: ENST00000526055.5

TSPAN4-216, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 469 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-216ENST00000526055 PCED1AQ9H1Q7 454 aa19.03■□□□□ 0.64
TSPAN4-216ENST00000526055 SMOC1Q9H4F8 434 aa19.03■□□□□ 0.64
TSPAN4-216ENST00000526055 MYO6Q9UM54 1294 aa19.03■□□□□ 0.64
TSPAN4-216ENST00000526055 HS3ST4Q9Y661 456 aa19.03■□□□□ 0.64
TSPAN4-216ENST00000526055 GON4LQ3T8J9 2241 aa19.02■□□□□ 0.64
TSPAN4-216ENST00000526055 MUC22E2RYF6 1773 aaPredicted RBP19.02■□□□□ 0.64
TSPAN4-216ENST00000526055 PAGE1O75459 146 aa19.02■□□□□ 0.64
TSPAN4-216ENST00000526055 CLDN11O75508 207 aa19.02■□□□□ 0.64
TSPAN4-216ENST00000526055 UNGP13051 313 aaPredicted RBP19.02■□□□□ 0.64
TSPAN4-216ENST00000526055 VASPP50552 380 aaPredicted RBP19.02■□□□□ 0.64
TSPAN4-216ENST00000526055 TPMTP51580 245 aa19.02■□□□□ 0.64
TSPAN4-216ENST00000526055 GSCP56915 257 aaPredicted RBP19.02■□□□□ 0.64
TSPAN4-216ENST00000526055 ECT2LQ008S8 904 aa19.02■□□□□ 0.64
TSPAN4-216ENST00000526055 DUOXA1Q1HG43 343 aa19.02■□□□□ 0.64
TSPAN4-216ENST00000526055 HNRNPA1L2Q32P51 320 aaKnown RBP19.02■□□□□ 0.64
TSPAN4-216ENST00000526055 FILIP1LQ4L180 1135 aa19.02■□□□□ 0.64
TSPAN4-216ENST00000526055 SLC23A3Q6PIS1 610 aa19.02■□□□□ 0.64
TSPAN4-216ENST00000526055 BNIPLQ7Z465 357 aa19.02■□□□□ 0.64
TSPAN4-216ENST00000526055 ERLEC1Q96DZ1 483 aa19.02■□□□□ 0.64
TSPAN4-216ENST00000526055 MYO19Q96H55 970 aa19.02■□□□□ 0.64
TSPAN4-216ENST00000526055 MRGPRX3Q96LB0 322 aa19.02■□□□□ 0.64
TSPAN4-216ENST00000526055 C1orf74Q96LT6 269 aa19.02■□□□□ 0.64
TSPAN4-216ENST00000526055 EDEM2Q9BV94 578 aa19.02■□□□□ 0.64
TSPAN4-216ENST00000526055 TKTL2Q9H0I9 626 aa19.02■□□□□ 0.64
TSPAN4-216ENST00000526055 RTN4Q9NQC3 1192 aaKnown RBP19.02■□□□□ 0.64
TSPAN4-216ENST00000526055 PRSS16Q9NQE7 514 aa19.02■□□□□ 0.64
TSPAN4-216ENST00000526055 SCML1Q9UN30 329 aa19.02■□□□□ 0.64
TSPAN4-216ENST00000526055 ERVW-1Q9UQF0 538 aa19.02■□□□□ 0.64
TSPAN4-216ENST00000526055 ITIH6Q6UXX5 1313 aa19.01■□□□□ 0.63
TSPAN4-216ENST00000526055 LNP1A1A4G5 178 aa19.01■□□□□ 0.63
TSPAN4-216ENST00000526055 TARSL2A2RTX5 802 aaKnown RBP19.01■□□□□ 0.63
TSPAN4-216ENST00000526055 GOLGA8SH3BPF8 625 aa19.01■□□□□ 0.63
TSPAN4-216ENST00000526055 ITPKAP23677 461 aa19.01■□□□□ 0.63
TSPAN4-216ENST00000526055 RDXP35241 583 aaKnown RBP19.01■□□□□ 0.63
TSPAN4-216ENST00000526055 FLT3P36888 993 aa19.01■□□□□ 0.63
TSPAN4-216ENST00000526055 NNMTP40261 264 aa19.01■□□□□ 0.63
TSPAN4-216ENST00000526055 NSFP46459 744 aaKnown RBP19.01■□□□□ 0.63
TSPAN4-216ENST00000526055 CDH4P55283 916 aa19.01■□□□□ 0.63
TSPAN4-216ENST00000526055 CENPCQ03188 943 aa19.01■□□□□ 0.63
TSPAN4-216ENST00000526055 SFSWAPQ12872 951 aaKnown RBP19.01■□□□□ 0.63
TSPAN4-216ENST00000526055 TRIM61Q5EBN2 209 aa19.01■□□□□ 0.63
TSPAN4-216ENST00000526055 WDR45BQ5MNZ6 344 aa19.01■□□□□ 0.63
TSPAN4-216ENST00000526055 RNF219Q5W0B1 726 aaPredicted RBP19.01■□□□□ 0.63
TSPAN4-216ENST00000526055 TCEAL6Q6IPX3 200 aa19.01■□□□□ 0.63
TSPAN4-216ENST00000526055 MMS22LQ6ZRQ5 1243 aa19.01■□□□□ 0.63
TSPAN4-216ENST00000526055 ARMCX6Q7L4S7 300 aa19.01■□□□□ 0.63
TSPAN4-216ENST00000526055 TCEAL3Q969E4 200 aa19.01■□□□□ 0.63
TSPAN4-216ENST00000526055 TOE1Q96GM8 510 aaKnown RBP19.01■□□□□ 0.63
TSPAN4-216ENST00000526055 HSPA12BQ96MM6 686 aa19.01■□□□□ 0.63
TSPAN4-216ENST00000526055 HAPLN3Q96S86 360 aa19.01■□□□□ 0.63
TSPAN4-216ENST00000526055 TBCBQ99426 244 aa19.01■□□□□ 0.63
TSPAN4-216ENST00000526055 FUCA2Q9BTY2 467 aa19.01■□□□□ 0.63
TSPAN4-216ENST00000526055 ADAM33Q9BZ11 813 aa19.01■□□□□ 0.63
TSPAN4-216ENST00000526055 RXFP3Q9NSD7 469 aa19.01■□□□□ 0.63
TSPAN4-216ENST00000526055 SUSD2Q9UGT4 822 aa19.01■□□□□ 0.63
TSPAN4-216ENST00000526055 VANGL2Q9ULK5 521 aa19.01■□□□□ 0.63
TSPAN4-216ENST00000526055 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19■□□□□ 0.63
TSPAN4-216ENST00000526055 TM4SF5O14894 197 aa19■□□□□ 0.63
TSPAN4-216ENST00000526055 RNASEH1O60930 286 aaKnown RBP19■□□□□ 0.63
TSPAN4-216ENST00000526055 ENDOD1O94919 500 aa19■□□□□ 0.63
TSPAN4-216ENST00000526055 ADCY5O95622 1261 aa19■□□□□ 0.63
TSPAN4-216ENST00000526055 CALB1P05937 261 aa19■□□□□ 0.63
TSPAN4-216ENST00000526055 FERP16591 822 aa19■□□□□ 0.63
TSPAN4-216ENST00000526055 TFE3P19532 575 aaPredicted RBP19■□□□□ 0.63
TSPAN4-216ENST00000526055 ZNF177Q13360 481 aaPredicted RBP19■□□□□ 0.63
TSPAN4-216ENST00000526055 TTC31Q49AM3 519 aaPredicted RBP19■□□□□ 0.63
TSPAN4-216ENST00000526055 ZNF776Q68DI1 518 aaPredicted RBP19■□□□□ 0.63
TSPAN4-216ENST00000526055 CXorf57Q6NSI4 855 aaKnown RBP19■□□□□ 0.63
TSPAN4-216ENST00000526055 PPP1R2P3Q6NXS1 205 aa19■□□□□ 0.63
TSPAN4-216ENST00000526055 LRRC31Q6UY01 552 aa19■□□□□ 0.63
TSPAN4-216ENST00000526055 PHF13Q86YI8 300 aaPredicted RBP19■□□□□ 0.63
TSPAN4-216ENST00000526055 SLC41A1Q8IVJ1 513 aa19■□□□□ 0.63
TSPAN4-216ENST00000526055 IGSF8Q969P0 613 aa19■□□□□ 0.63
TSPAN4-216ENST00000526055 RSPH9Q9H1X1 276 aaPredicted RBP19■□□□□ 0.63
TSPAN4-216ENST00000526055 CD93Q9NPY3 652 aa19■□□□□ 0.63
TSPAN4-216ENST00000526055 TMEM74BQ9NUR3 256 aa19■□□□□ 0.63
TSPAN4-216ENST00000526055 SLC6A14Q9UN76 642 aa19■□□□□ 0.63
TSPAN4-216ENST00000526055 TBC1D30Q9Y2I9 924 aa19■□□□□ 0.63
TSPAN4-216ENST00000526055 SPTBN2O15020 2390 aa19■□□□□ 0.63
TSPAN4-216ENST00000526055 TNRC6BQ9UPQ9 1833 aaKnown RBP19■□□□□ 0.63
TSPAN4-216ENST00000526055 NCOR2Q9Y618 2525 aa18.99■□□□□ 0.63
TSPAN4-216ENST00000526055 LAMA1P25391 3075 aa18.99■□□□□ 0.63
TSPAN4-216ENST00000526055 EDDM13A0A1B0GTR0 161 aa18.99■□□□□ 0.63
TSPAN4-216ENST00000526055 A0A1W2PQC6 194 aa18.99■□□□□ 0.63
TSPAN4-216ENST00000526055 DCDC2BA2VCK2 349 aa18.99■□□□□ 0.63
TSPAN4-216ENST00000526055 DNTTP04053 509 aa18.99■□□□□ 0.63
TSPAN4-216ENST00000526055 SERPINF2P08697 491 aa18.99■□□□□ 0.63
TSPAN4-216ENST00000526055 GNSP15586 552 aa18.99■□□□□ 0.63
TSPAN4-216ENST00000526055 PDGFRAP16234 1089 aa18.99■□□□□ 0.63
TSPAN4-216ENST00000526055 RPS14P62263 151 aaKnown RBP18.99■□□□□ 0.63
TSPAN4-216ENST00000526055 IRX4P78413 519 aa18.99■□□□□ 0.63
TSPAN4-216ENST00000526055 CLEC16AQ2KHT3 1053 aa18.99■□□□□ 0.63
TSPAN4-216ENST00000526055 C2CD6Q53TS8 623 aa18.99■□□□□ 0.63
TSPAN4-216ENST00000526055 DAB2IPQ5VWQ8 1189 aa18.99■□□□□ 0.63
TSPAN4-216ENST00000526055 APCDD1Q8J025 514 aa18.99■□□□□ 0.63
TSPAN4-216ENST00000526055 ZNF366Q8N895 744 aa18.99■□□□□ 0.63
TSPAN4-216ENST00000526055 DNASE2BQ8WZ79 361 aa18.99■□□□□ 0.63
TSPAN4-216ENST00000526055 CFAP57Q96MR6 1250 aa18.99■□□□□ 0.63
TSPAN4-216ENST00000526055 C11orf70Q9BRQ4 267 aa18.99■□□□□ 0.63
TSPAN4-216ENST00000526055 SIK2Q9H0K1 926 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms