RNA–Protein interactions for RNA: ENST00000525975.5

HIPK3-204, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIPK3, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-204ENST00000525975 NOVP48745 357 aa4.81□□□□□ -1.64
HIPK3-204ENST00000525975 CUL2Q13617 745 aa4.81□□□□□ -1.64
HIPK3-204ENST00000525975 PRKG1Q13976 671 aa4.81□□□□□ -1.64
HIPK3-204ENST00000525975 RAB39AQ14964 217 aa4.81□□□□□ -1.64
HIPK3-204ENST00000525975 PHKG1Q16816 387 aa4.81□□□□□ -1.64
HIPK3-204ENST00000525975 XKR9Q5GH70 373 aa4.81□□□□□ -1.64
HIPK3-204ENST00000525975 FAM47CQ5HY64 1035 aa4.81□□□□□ -1.64
HIPK3-204ENST00000525975 SEL1L3Q68CR1 1132 aa4.81□□□□□ -1.64
HIPK3-204ENST00000525975 LYSMD3Q7Z3D4 306 aa4.81□□□□□ -1.64
HIPK3-204ENST00000525975 MCF2L2Q86YR7 1114 aa4.81□□□□□ -1.64
HIPK3-204ENST00000525975 ZC3H7AQ8IWR0 971 aaKnown RBP4.81□□□□□ -1.64
HIPK3-204ENST00000525975 ZFPM1Q8IX07 1006 aa4.81□□□□□ -1.64
HIPK3-204ENST00000525975 GPD1LQ8N335 351 aa4.81□□□□□ -1.64
HIPK3-204ENST00000525975 ZNF781Q8N8C0 355 aa4.81□□□□□ -1.64
HIPK3-204ENST00000525975 TMEM102Q8N9M5 508 aaPredicted RBP4.81□□□□□ -1.64
HIPK3-204ENST00000525975 ADAM32Q8TC27 787 aa4.81□□□□□ -1.64
HIPK3-204ENST00000525975 TSNARE1Q96NA8 513 aa4.81□□□□□ -1.64
HIPK3-204ENST00000525975 OR52B2Q96RD2 323 aa4.81□□□□□ -1.64
HIPK3-204ENST00000525975 ARPC5LQ9BPX5 153 aa4.81□□□□□ -1.64
HIPK3-204ENST00000525975 HGH1Q9BTY7 390 aa4.81□□□□□ -1.64
HIPK3-204ENST00000525975 HERC2P3Q9BVR0 1158 aa4.81□□□□□ -1.64
HIPK3-204ENST00000525975 OSBPL10Q9BXB5 764 aa4.81□□□□□ -1.64
HIPK3-204ENST00000525975 ANKRD60Q9BZ19 345 aa4.81□□□□□ -1.64
HIPK3-204ENST00000525975 POPDC2Q9HBU9 364 aa4.81□□□□□ -1.64
HIPK3-204ENST00000525975 HMG20AQ9NP66 347 aa4.81□□□□□ -1.64
HIPK3-204ENST00000525975 COPG2Q9UBF2 871 aa4.81□□□□□ -1.64
HIPK3-204ENST00000525975 PTBP2Q9UKA9 531 aaKnown RBP4.81□□□□□ -1.64
HIPK3-204ENST00000525975 ERVK-11Q9UQG0 969 aa4.81□□□□□ -1.64
HIPK3-204ENST00000525975 NOX1Q9Y5S8 564 aa4.81□□□□□ -1.64
HIPK3-204ENST00000525975 LAMB2P55268 1798 aa4.81□□□□□ -1.64
HIPK3-204ENST00000525975 TPST1O60507 370 aa4.81□□□□□ -1.64
HIPK3-204ENST00000525975 MYO1DO94832 1006 aa4.81□□□□□ -1.64
HIPK3-204ENST00000525975 CHEK2O96017 543 aa4.81□□□□□ -1.64
HIPK3-204ENST00000525975 AMHP03971 560 aa4.81□□□□□ -1.64
HIPK3-204ENST00000525975 CYP3A4P08684 503 aa4.81□□□□□ -1.64
HIPK3-204ENST00000525975 HSPA8P11142 646 aaKnown RBP4.81□□□□□ -1.64
HIPK3-204ENST00000525975 NR4A1P22736 598 aa4.81□□□□□ -1.64
HIPK3-204ENST00000525975 MMP8P22894 467 aa4.81□□□□□ -1.64
HIPK3-204ENST00000525975 KDELR1P24390 212 aa4.81□□□□□ -1.64
HIPK3-204ENST00000525975 POLR2BP30876 1174 aaKnown RBP4.81□□□□□ -1.64
HIPK3-204ENST00000525975 RCVRNP35243 200 aa4.81□□□□□ -1.64
HIPK3-204ENST00000525975 RPS3AP61247 264 aaKnown RBP4.81□□□□□ -1.64
HIPK3-204ENST00000525975 GTF2BQ00403 316 aa4.81□□□□□ -1.64
HIPK3-204ENST00000525975 OGDHQ02218 1023 aa4.81□□□□□ -1.64
HIPK3-204ENST00000525975 PMS2P3Q13401 168 aa4.81□□□□□ -1.64
HIPK3-204ENST00000525975 TFDP2Q14188 446 aa4.81□□□□□ -1.64
HIPK3-204ENST00000525975 KCNJ11Q14654 390 aa4.81□□□□□ -1.64
HIPK3-204ENST00000525975 ZNF846Q147U1 533 aa4.81□□□□□ -1.64
HIPK3-204ENST00000525975 PCLAFQ15004 111 aa4.81□□□□□ -1.64
HIPK3-204ENST00000525975 ANKRD26P1Q6NSI1 321 aa4.81□□□□□ -1.64
HIPK3-204ENST00000525975 NPNTQ6UXI9 565 aa4.81□□□□□ -1.64
HIPK3-204ENST00000525975 KCTD8Q6ZWB6 473 aa4.81□□□□□ -1.64
HIPK3-204ENST00000525975 IGFN1Q86VF2 1251 aa4.81□□□□□ -1.64
HIPK3-204ENST00000525975 PCDH20Q8N6Y1 951 aaKnown RBP4.81□□□□□ -1.64
HIPK3-204ENST00000525975 ACMSDQ8TDX5 336 aa4.81□□□□□ -1.64
HIPK3-204ENST00000525975 FNIP1Q8TF40 1166 aa4.81□□□□□ -1.64
HIPK3-204ENST00000525975 CRYGNQ8WXF5 182 aa4.81□□□□□ -1.64
HIPK3-204ENST00000525975 ATXN7L3BQ96GX2 97 aa4.81□□□□□ -1.64
HIPK3-204ENST00000525975 CNDP1Q96KN2 507 aa4.81□□□□□ -1.64
HIPK3-204ENST00000525975 MARK4Q96L34 752 aa4.81□□□□□ -1.64
HIPK3-204ENST00000525975 SLC29A1Q99808 456 aa4.81□□□□□ -1.64
HIPK3-204ENST00000525975 STRA6Q9BX79 667 aa4.81□□□□□ -1.64
HIPK3-204ENST00000525975 ILKAPQ9H0C8 392 aaPredicted RBP4.81□□□□□ -1.64
HIPK3-204ENST00000525975 RAD21L1Q9H4I0 556 aa4.81□□□□□ -1.64
HIPK3-204ENST00000525975 SMARCAD1Q9H4L7 1026 aa4.81□□□□□ -1.64
HIPK3-204ENST00000525975 SMYD2Q9NRG4 433 aa4.81□□□□□ -1.64
HIPK3-204ENST00000525975 TBX20Q9UMR3 447 aa4.81□□□□□ -1.64
HIPK3-204ENST00000525975 CDYLQ9Y232 598 aa4.81□□□□□ -1.64
HIPK3-204ENST00000525975 TAF1P21675 1872 aa4.81□□□□□ -1.64
HIPK3-204ENST00000525975 ROBO1Q9Y6N7 1651 aa4.81□□□□□ -1.64
HIPK3-204ENST00000525975 IGLV3-22A0A075B6J6 115 aa4.81□□□□□ -1.64
HIPK3-204ENST00000525975 LOC102724428A0A0B4J2F2 783 aa4.81□□□□□ -1.64
HIPK3-204ENST00000525975 HEATR9A2RTY3 570 aa4.81□□□□□ -1.64
HIPK3-204ENST00000525975 NOTOA8MTQ0 251 aa4.81□□□□□ -1.64
HIPK3-204ENST00000525975 CLDN25C9JDP6 229 aa4.81□□□□□ -1.64
HIPK3-204ENST00000525975 PSMD11O00231 422 aa4.81□□□□□ -1.64
HIPK3-204ENST00000525975 PLOD2O00469 737 aa4.81□□□□□ -1.64
HIPK3-204ENST00000525975 MGEA5O60502 916 aa4.81□□□□□ -1.64
HIPK3-204ENST00000525975 DEAF1O75398 565 aaPredicted RBP4.81□□□□□ -1.64
HIPK3-204ENST00000525975 TIPRLO75663 272 aa4.81□□□□□ -1.64
HIPK3-204ENST00000525975 CLPXO76031 633 aa4.81□□□□□ -1.64
HIPK3-204ENST00000525975 UFL1O94874 794 aa4.81□□□□□ -1.64
HIPK3-204ENST00000525975 MAP3K6O95382 1288 aa4.81□□□□□ -1.64
HIPK3-204ENST00000525975 KRT3P12035 628 aa4.81□□□□□ -1.64
HIPK3-204ENST00000525975 CD19P15391 556 aa4.81□□□□□ -1.64
HIPK3-204ENST00000525975 TFE3P19532 575 aaPredicted RBP4.81□□□□□ -1.64
HIPK3-204ENST00000525975 TBXAS1P24557 533 aaPredicted RBP4.81□□□□□ -1.64
HIPK3-204ENST00000525975 RAD23AP54725 363 aa4.81□□□□□ -1.64
HIPK3-204ENST00000525975 CDH6P55285 790 aa4.81□□□□□ -1.64
HIPK3-204ENST00000525975 NME5P56597 212 aa4.81□□□□□ -1.64
HIPK3-204ENST00000525975 SIK1P57059 783 aa4.81□□□□□ -1.64
HIPK3-204ENST00000525975 RHBDL3P58872 404 aa4.81□□□□□ -1.64
HIPK3-204ENST00000525975 GTF2IP78347 998 aa4.81□□□□□ -1.64
HIPK3-204ENST00000525975 CREB5Q02930 508 aa4.81□□□□□ -1.64
HIPK3-204ENST00000525975 ZNF252P-AS1Q0IIN9 211 aa4.81□□□□□ -1.64
HIPK3-204ENST00000525975 NFATC3Q12968 1075 aa4.81□□□□□ -1.64
HIPK3-204ENST00000525975 MAPK11Q15759 364 aa4.81□□□□□ -1.64
HIPK3-204ENST00000525975 ARL13BQ3SXY8 428 aa4.81□□□□□ -1.64
HIPK3-204ENST00000525975 TIGD2Q4W5G0 525 aa4.81□□□□□ -1.64
HIPK3-204ENST00000525975 DCLRE1AQ6PJP8 1040 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms