RNA–Protein interactions for RNA: ENST00000525284.5

LRRK1-202, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-202ENST00000525284 PLCL2Q9UPR0 1127 aa13.93□□□□□ -0.18
LRRK1-202ENST00000525284 RPH3AQ9Y2J0 694 aaPredicted RBP13.93□□□□□ -0.18
LRRK1-202ENST00000525284 GMPPBQ9Y5P6 360 aa13.93□□□□□ -0.18
LRRK1-202ENST00000525284 ARHGEF10O15013 1369 aa13.93□□□□□ -0.18
LRRK1-202ENST00000525284 SERPINA1P01009 418 aa13.93□□□□□ -0.18
LRRK1-202ENST00000525284 SPP2Q13103 211 aa13.93□□□□□ -0.18
LRRK1-202ENST00000525284 GRM4Q14833 912 aa13.93□□□□□ -0.18
LRRK1-202ENST00000525284 ZC2HC1CQ53FD0 456 aaPredicted RBP13.93□□□□□ -0.18
LRRK1-202ENST00000525284 METTL16Q86W50 562 aaKnown RBP13.93□□□□□ -0.18
LRRK1-202ENST00000525284 ADHFE1Q8IWW8 467 aa13.93□□□□□ -0.18
LRRK1-202ENST00000525284 DENND6BQ8NEG7 585 aa13.93□□□□□ -0.18
LRRK1-202ENST00000525284 FAM81AQ8TBF8 368 aa13.93□□□□□ -0.18
LRRK1-202ENST00000525284 LRRC4BQ9NT99 713 aa13.93□□□□□ -0.18
LRRK1-202ENST00000525284 CLIC5Q9NZA1 410 aa13.93□□□□□ -0.18
LRRK1-202ENST00000525284 MORF4L1Q9UBU8 362 aa13.93□□□□□ -0.18
LRRK1-202ENST00000525284 ZNF180Q9UJW8 692 aa13.93□□□□□ -0.18
LRRK1-202ENST00000525284 ERGIC3Q9Y282 383 aa13.93□□□□□ -0.18
LRRK1-202ENST00000525284 TMEM5Q9Y2B1 443 aa13.93□□□□□ -0.18
LRRK1-202ENST00000525284 TP73O15350 636 aa13.93□□□□□ -0.18
LRRK1-202ENST00000525284 CYP2A7P20853 494 aa13.93□□□□□ -0.18
LRRK1-202ENST00000525284 HOXD10P28358 340 aa13.93□□□□□ -0.18
LRRK1-202ENST00000525284 PRR23CQ6ZRP0 262 aa13.93□□□□□ -0.18
LRRK1-202ENST00000525284 SLC26A11Q86WA9 606 aa13.93□□□□□ -0.18
LRRK1-202ENST00000525284 CCNJLQ8IV13 435 aa13.93□□□□□ -0.18
LRRK1-202ENST00000525284 MYDGFQ969H8 173 aa13.93□□□□□ -0.18
LRRK1-202ENST00000525284 NUP50Q9UKX7 468 aa13.93□□□□□ -0.18
LRRK1-202ENST00000525284 SHOC2Q9UQ13 582 aa13.93□□□□□ -0.18
LRRK1-202ENST00000525284 CDHR2Q9BYE9 1310 aa13.93□□□□□ -0.18
LRRK1-202ENST00000525284 ATP10AO60312 1499 aa13.93□□□□□ -0.18
LRRK1-202ENST00000525284 KIF28PB7ZC32 967 aa13.93□□□□□ -0.18
LRRK1-202ENST00000525284 EPN2O95208 641 aa13.93□□□□□ -0.18
LRRK1-202ENST00000525284 IFNA6P05013 189 aa13.93□□□□□ -0.18
LRRK1-202ENST00000525284 USP11P51784 963 aa13.93□□□□□ -0.18
LRRK1-202ENST00000525284 FAPQ12884 760 aa13.93□□□□□ -0.18
LRRK1-202ENST00000525284 EMILIN2Q9BXX0 1053 aa13.93□□□□□ -0.18
LRRK1-202ENST00000525284 GANQ9H2C0 597 aa13.93□□□□□ -0.18
LRRK1-202ENST00000525284 CDC42EP4Q9H3Q1 356 aaKnown RBP13.93□□□□□ -0.18
LRRK1-202ENST00000525284 GPN1Q9HCN4 374 aaPredicted RBP13.93□□□□□ -0.18
LRRK1-202ENST00000525284 TARBP1Q13395 1621 aaKnown RBP13.93□□□□□ -0.18
LRRK1-202ENST00000525284 LOC110117498-PIK3R3F6TDL0 507 aa13.92□□□□□ -0.18
LRRK1-202ENST00000525284 RNASEH1O60930 286 aaKnown RBP13.92□□□□□ -0.18
LRRK1-202ENST00000525284 HIRAP54198 1017 aaPredicted RBP13.92□□□□□ -0.18
LRRK1-202ENST00000525284 PRR5LQ6MZQ0 368 aa13.92□□□□□ -0.18
LRRK1-202ENST00000525284 AGMOQ6ZNB7 445 aa13.92□□□□□ -0.18
LRRK1-202ENST00000525284 GMCL1Q96IK5 515 aa13.92□□□□□ -0.18
LRRK1-202ENST00000525284 DRG1Q9Y295 367 aaKnown RBP13.92□□□□□ -0.18
LRRK1-202ENST00000525284 DHRS7Q9Y394 339 aa13.92□□□□□ -0.18
LRRK1-202ENST00000525284 PGRMC2O15173 223 aa13.92□□□□□ -0.18
LRRK1-202ENST00000525284 PCDH8O95206 1070 aa13.92□□□□□ -0.18
LRRK1-202ENST00000525284 PSMD5Q16401 504 aa13.92□□□□□ -0.18
LRRK1-202ENST00000525284 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.92□□□□□ -0.18
LRRK1-202ENST00000525284 ZNF554Q86TJ5 538 aa13.92□□□□□ -0.18
LRRK1-202ENST00000525284 OSBPL11Q9BXB4 747 aa13.92□□□□□ -0.18
LRRK1-202ENST00000525284 CCNKO75909 580 aa13.92□□□□□ -0.18
LRRK1-202ENST00000525284 PRH1P02810 166 aa13.92□□□□□ -0.18
LRRK1-202ENST00000525284 WEE1P30291 646 aa13.92□□□□□ -0.18
LRRK1-202ENST00000525284 HPCAL1P37235 193 aa13.92□□□□□ -0.18
LRRK1-202ENST00000525284 MILR1Q7Z6M3 343 aa13.92□□□□□ -0.18
LRRK1-202ENST00000525284 AP3S1Q92572 193 aa13.92□□□□□ -0.18
LRRK1-202ENST00000525284 OXCT2Q9BYC2 517 aaPredicted RBP13.92□□□□□ -0.18
LRRK1-202ENST00000525284 CNTFP26441 200 aa13.92□□□□□ -0.18
LRRK1-202ENST00000525284 ADSSP30520 456 aa13.92□□□□□ -0.18
LRRK1-202ENST00000525284 ADAM17P78536 824 aa13.92□□□□□ -0.18
LRRK1-202ENST00000525284 SYT12Q8IV01 421 aa13.92□□□□□ -0.18
LRRK1-202ENST00000525284 ADSSL1Q8N142 457 aa13.92□□□□□ -0.18
LRRK1-202ENST00000525284 FBXO39Q8N4B4 442 aa13.92□□□□□ -0.18
LRRK1-202ENST00000525284 SYTL5Q8TDW5 730 aaPredicted RBP13.92□□□□□ -0.18
LRRK1-202ENST00000525284 EFHD2Q96C19 240 aaPredicted RBP13.92□□□□□ -0.18
LRRK1-202ENST00000525284 LY9Q9HBG7 655 aa13.92□□□□□ -0.18
LRRK1-202ENST00000525284 SLC38A7Q9NVC3 462 aa13.92□□□□□ -0.18
LRRK1-202ENST00000525284 ZNF221Q9UK13 617 aa13.92□□□□□ -0.18
LRRK1-202ENST00000525284 OR14I1A6ND48 311 aa13.92□□□□□ -0.18
LRRK1-202ENST00000525284 MPOP05164 745 aa13.92□□□□□ -0.18
LRRK1-202ENST00000525284 MBL2P11226 248 aaPredicted RBP13.92□□□□□ -0.18
LRRK1-202ENST00000525284 MAGEA12P43365 314 aa13.92□□□□□ -0.18
LRRK1-202ENST00000525284 MADCAM1Q13477 382 aa13.92□□□□□ -0.18
LRRK1-202ENST00000525284 TMEM132BQ14DG7 1078 aa13.92□□□□□ -0.18
LRRK1-202ENST00000525284 SLC15A2Q16348 729 aa13.92□□□□□ -0.18
LRRK1-202ENST00000525284 RBM44Q6ZP01 1051 aaKnown RBP13.92□□□□□ -0.18
LRRK1-202ENST00000525284 STK32AQ8WU08 396 aa13.92□□□□□ -0.18
LRRK1-202ENST00000525284 COL26A1Q96A83 441 aa13.92□□□□□ -0.18
LRRK1-202ENST00000525284 SENP6Q9GZR1 1112 aaPredicted RBP13.92□□□□□ -0.18
LRRK1-202ENST00000525284 NT5MQ9NPB1 228 aa13.92□□□□□ -0.18
LRRK1-202ENST00000525284 PDGFCQ9NRA1 345 aa13.92□□□□□ -0.18
LRRK1-202ENST00000525284 CUEDC1Q9NWM3 386 aaPredicted RBP13.92□□□□□ -0.18
LRRK1-202ENST00000525284 CBX6O95503 412 aa13.91□□□□□ -0.18
LRRK1-202ENST00000525284 COX7A2P14406 83 aa13.91□□□□□ -0.18
LRRK1-202ENST00000525284 BOLA3Q53S33 107 aa13.91□□□□□ -0.18
LRRK1-202ENST00000525284 TPCN2Q8NHX9 752 aa13.91□□□□□ -0.18
LRRK1-202ENST00000525284 TMEM121Q9BTD3 319 aa13.91□□□□□ -0.18
LRRK1-202ENST00000525284 SSR3Q9UNL2 185 aa13.91□□□□□ -0.18
LRRK1-202ENST00000525284 ZNF335Q9H4Z2 1342 aaPredicted RBP13.91□□□□□ -0.18
LRRK1-202ENST00000525284 IL18RAPO95256 599 aa13.91□□□□□ -0.18
LRRK1-202ENST00000525284 DHFRP00374 187 aa13.91□□□□□ -0.18
LRRK1-202ENST00000525284 PROCP04070 461 aa13.91□□□□□ -0.18
LRRK1-202ENST00000525284 GARTP22102 1010 aa13.91□□□□□ -0.18
LRRK1-202ENST00000525284 S100A3P33764 101 aa13.91□□□□□ -0.18
LRRK1-202ENST00000525284 MAZP56270 477 aaKnown RBP13.91□□□□□ -0.18
LRRK1-202ENST00000525284 RHOAP61586 193 aa13.91□□□□□ -0.18
LRRK1-202ENST00000525284 SRSF11Q05519 484 aaKnown RBP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms