RNA–Protein interactions for RNA: ENST00000524534.5

PTPRK-217, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 2,441 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-217ENST00000524534 THRAP10827 490 aa11.78□□□□□ -0.52
PTPRK-217ENST00000524534 CD1EP15812 388 aa11.78□□□□□ -0.52
PTPRK-217ENST00000524534 GOT1P17174 413 aa11.78□□□□□ -0.52
PTPRK-217ENST00000524534 YY1P25490 414 aa11.78□□□□□ -0.52
PTPRK-217ENST00000524534 PIK3R1P27986 724 aa11.78□□□□□ -0.52
PTPRK-217ENST00000524534 MLH1P40692 756 aa11.78□□□□□ -0.52
PTPRK-217ENST00000524534 SERPINB8P50452 374 aa11.78□□□□□ -0.52
PTPRK-217ENST00000524534 SNX16P57768 344 aa11.78□□□□□ -0.52
PTPRK-217ENST00000524534 TBC1D25Q3MII6 688 aa11.78□□□□□ -0.52
PTPRK-217ENST00000524534 SPANXN3Q5MJ09 141 aa11.78□□□□□ -0.52
PTPRK-217ENST00000524534 C16orf89Q6UX73 402 aa11.78□□□□□ -0.52
PTPRK-217ENST00000524534 EEPD1Q7L9B9 569 aa11.78□□□□□ -0.52
PTPRK-217ENST00000524534 SLC26A9Q7LBE3 791 aa11.78□□□□□ -0.52
PTPRK-217ENST00000524534 SAMD7Q7Z3H4 446 aa11.78□□□□□ -0.52
PTPRK-217ENST00000524534 CLEC14AQ86T13 490 aa11.78□□□□□ -0.52
PTPRK-217ENST00000524534 ACOT1Q86TX2 421 aa11.78□□□□□ -0.52
PTPRK-217ENST00000524534 MPP4Q96JB8 637 aa11.78□□□□□ -0.52
PTPRK-217ENST00000524534 SERPINI1Q99574 410 aa11.78□□□□□ -0.52
PTPRK-217ENST00000524534 RBBP8Q99708 897 aa11.78□□□□□ -0.52
PTPRK-217ENST00000524534 TCF7L2Q9NQB0 619 aa11.78□□□□□ -0.52
PTPRK-217ENST00000524534 PLK2Q9NYY3 685 aa11.78□□□□□ -0.52
PTPRK-217ENST00000524534 E2F8A0AVK6 867 aa11.77□□□□□ -0.52
PTPRK-217ENST00000524534 RGSL1A5PLK6 1076 aa11.77□□□□□ -0.52
PTPRK-217ENST00000524534 RNF103O00237 685 aa11.77□□□□□ -0.52
PTPRK-217ENST00000524534 ADGRE1Q14246 886 aa11.77□□□□□ -0.52
PTPRK-217ENST00000524534 SMAD1Q15797 465 aaKnown RBP11.77□□□□□ -0.52
PTPRK-217ENST00000524534 ZNF423Q2M1K9 1284 aa11.77□□□□□ -0.52
PTPRK-217ENST00000524534 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.77□□□□□ -0.52
PTPRK-217ENST00000524534 CELF3Q5SZQ8 465 aaKnown RBP11.77□□□□□ -0.52
PTPRK-217ENST00000524534 ZFP1Q6P2D0 407 aa11.77□□□□□ -0.52
PTPRK-217ENST00000524534 CES3Q6UWW8 571 aa11.77□□□□□ -0.52
PTPRK-217ENST00000524534 LBX2Q6XYB7 198 aa11.77□□□□□ -0.52
PTPRK-217ENST00000524534 RIOX2Q8IUF8 465 aa11.77□□□□□ -0.52
PTPRK-217ENST00000524534 DSELQ8IZU8 1212 aa11.77□□□□□ -0.52
PTPRK-217ENST00000524534 TDRD5Q8NAT2 981 aaKnown RBP11.77□□□□□ -0.52
PTPRK-217ENST00000524534 CLEC4CQ8WTT0 213 aa11.77□□□□□ -0.52
PTPRK-217ENST00000524534 P2RY11Q96G91 374 aa11.77□□□□□ -0.52
PTPRK-217ENST00000524534 FCRL3Q96P31 734 aaPredicted RBP11.77□□□□□ -0.52
PTPRK-217ENST00000524534 MRPL45Q9BRJ2 306 aaKnown RBP11.77□□□□□ -0.52
PTPRK-217ENST00000524534 RBM38Q9H0Z9 239 aaKnown RBP11.77□□□□□ -0.52
PTPRK-217ENST00000524534 ZNF696Q9H7X3 374 aa11.77□□□□□ -0.52
PTPRK-217ENST00000524534 RIMS3Q9UJD0 308 aa11.77□□□□□ -0.52
PTPRK-217ENST00000524534 LZTS1Q9Y250 596 aa11.77□□□□□ -0.52
PTPRK-217ENST00000524534 NME7Q9Y5B8 376 aa11.77□□□□□ -0.52
PTPRK-217ENST00000524534 RPS6KL1Q9Y6S9 549 aa11.77□□□□□ -0.52
PTPRK-217ENST00000524534 PTPRFP10586 1907 aa11.77□□□□□ -0.53
PTPRK-217ENST00000524534 AIM2O14862 343 aa11.77□□□□□ -0.53
PTPRK-217ENST00000524534 MFSD11O43934 449 aa11.77□□□□□ -0.53
PTPRK-217ENST00000524534 TRIM13O60858 407 aa11.77□□□□□ -0.53
PTPRK-217ENST00000524534 H2AFYO75367 372 aaKnown RBP11.77□□□□□ -0.53
PTPRK-217ENST00000524534 CRTAMO95727 393 aa11.77□□□□□ -0.53
PTPRK-217ENST00000524534 CLPTM1O96005 669 aa11.77□□□□□ -0.53
PTPRK-217ENST00000524534 CAPNS1P04632 268 aa11.77□□□□□ -0.53
PTPRK-217ENST00000524534 MPOP05164 745 aa11.77□□□□□ -0.53
PTPRK-217ENST00000524534 DPEP1P16444 411 aa11.77□□□□□ -0.53
PTPRK-217ENST00000524534 PSMB4P28070 264 aa11.77□□□□□ -0.53
PTPRK-217ENST00000524534 HSPA1LP34931 641 aa11.77□□□□□ -0.53
PTPRK-217ENST00000524534 SPRP35270 261 aaPredicted RBP11.77□□□□□ -0.53
PTPRK-217ENST00000524534 PHKA2P46019 1235 aa11.77□□□□□ -0.53
PTPRK-217ENST00000524534 GLUD2P49448 558 aa11.77□□□□□ -0.53
PTPRK-217ENST00000524534 NUDT2P50583 147 aa11.77□□□□□ -0.53
PTPRK-217ENST00000524534 LIMK2P53671 638 aa11.77□□□□□ -0.53
PTPRK-217ENST00000524534 POU5F1BQ06416 359 aa11.77□□□□□ -0.53
PTPRK-217ENST00000524534 CNGA3Q16281 694 aa11.77□□□□□ -0.53
PTPRK-217ENST00000524534 PIGGQ5H8A4 983 aa11.77□□□□□ -0.53
PTPRK-217ENST00000524534 RARS2Q5T160 578 aaKnown RBP11.77□□□□□ -0.53
PTPRK-217ENST00000524534 BSPRYQ5W0U4 402 aa11.77□□□□□ -0.53
PTPRK-217ENST00000524534 RBM44Q6ZP01 1051 aaKnown RBP11.77□□□□□ -0.53
PTPRK-217ENST00000524534 AHI1Q8N157 1196 aa11.77□□□□□ -0.53
PTPRK-217ENST00000524534 PYROXD2Q8N2H3 581 aa11.77□□□□□ -0.53
PTPRK-217ENST00000524534 METTL25Q8N6Q8 603 aa11.77□□□□□ -0.53
PTPRK-217ENST00000524534 KYQ8NBH2 561 aa11.77□□□□□ -0.53
PTPRK-217ENST00000524534 CATSPER1Q8NEC5 780 aa11.77□□□□□ -0.53
PTPRK-217ENST00000524534 SLC7A14Q8TBB6 771 aa11.77□□□□□ -0.53
PTPRK-217ENST00000524534 JDP2Q8WYK2 163 aa11.77□□□□□ -0.53
PTPRK-217ENST00000524534 CPB2Q96IY4 423 aa11.77□□□□□ -0.53
PTPRK-217ENST00000524534 FERMT1Q9BQL6 677 aa11.77□□□□□ -0.53
PTPRK-217ENST00000524534 MRPS26Q9BYN8 205 aaKnown RBP11.77□□□□□ -0.53
PTPRK-217ENST00000524534 FAM49BQ9NUQ9 324 aa11.77□□□□□ -0.53
PTPRK-217ENST00000524534 PACSIN3Q9UKS6 424 aa11.77□□□□□ -0.53
PTPRK-217ENST00000524534 KPNA7A9QM74 516 aa11.76□□□□□ -0.53
PTPRK-217ENST00000524534 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.76□□□□□ -0.53
PTPRK-217ENST00000524534 MATN2O00339 956 aa11.76□□□□□ -0.53
PTPRK-217ENST00000524534 NOP56O00567 594 aaKnown RBP11.76□□□□□ -0.53
PTPRK-217ENST00000524534 SLC22A2O15244 555 aa11.76□□□□□ -0.53
PTPRK-217ENST00000524534 SERPINB5P36952 375 aa11.76□□□□□ -0.53
PTPRK-217ENST00000524534 SCNN1AP37088 669 aa11.76□□□□□ -0.53
PTPRK-217ENST00000524534 THOP1P52888 689 aa11.76□□□□□ -0.53
PTPRK-217ENST00000524534 CREB5Q02930 508 aa11.76□□□□□ -0.53
PTPRK-217ENST00000524534 KYAT1Q16773 422 aa11.76□□□□□ -0.53
PTPRK-217ENST00000524534 SOWAHAQ2M3V2 549 aa11.76□□□□□ -0.53
PTPRK-217ENST00000524534 USP41Q3LFD5 358 aa11.76□□□□□ -0.53
PTPRK-217ENST00000524534 FSTL4Q6MZW2 842 aa11.76□□□□□ -0.53
PTPRK-217ENST00000524534 B3GNT6Q6ZMB0 384 aa11.76□□□□□ -0.53
PTPRK-217ENST00000524534 SNX32Q86XE0 403 aa11.76□□□□□ -0.53
PTPRK-217ENST00000524534 CPSF7Q8N684 471 aaKnown RBP11.76□□□□□ -0.53
PTPRK-217ENST00000524534 ADCY4Q8NFM4 1077 aa11.76□□□□□ -0.53
PTPRK-217ENST00000524534 RP9Q8TA86 221 aaKnown RBP11.76□□□□□ -0.53
PTPRK-217ENST00000524534 PGBD4Q96DM1 585 aa11.76□□□□□ -0.53
PTPRK-217ENST00000524534 ZFRQ96KR1 1074 aaKnown RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms