RNA–Protein interactions for RNA: ENST00000524162.5

TRAPPC9-215, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-215ENST00000524162 DPP6P42658 865 aa21.54■■□□□ 1.04
TRAPPC9-215ENST00000524162 CDH4P55283 916 aa21.54■■□□□ 1.04
TRAPPC9-215ENST00000524162 CSRP2Q16527 193 aa21.54■■□□□ 1.04
TRAPPC9-215ENST00000524162 PLEKHG6Q3KR16 790 aa21.54■■□□□ 1.04
TRAPPC9-215ENST00000524162 ARL13BQ3SXY8 428 aa21.54■■□□□ 1.04
TRAPPC9-215ENST00000524162 CCDC14Q49A88 953 aa21.54■■□□□ 1.04
TRAPPC9-215ENST00000524162 FSCBQ5H9T9 825 aa21.54■■□□□ 1.04
TRAPPC9-215ENST00000524162 PITRM1Q5JRX3 1037 aa21.54■■□□□ 1.04
TRAPPC9-215ENST00000524162 PPP1R15BQ5SWA1 713 aa21.54■■□□□ 1.04
TRAPPC9-215ENST00000524162 PGBD3Q8N328 593 aa21.54■■□□□ 1.04
TRAPPC9-215ENST00000524162 DCLK2Q8N568 766 aa21.54■■□□□ 1.04
TRAPPC9-215ENST00000524162 IGSF8Q969P0 613 aa21.54■■□□□ 1.04
TRAPPC9-215ENST00000524162 SELENOOQ9BVL4 669 aa21.54■■□□□ 1.04
TRAPPC9-215ENST00000524162 TSPY26PQ9H489 355 aa21.54■■□□□ 1.04
TRAPPC9-215ENST00000524162 HAUS4Q9H6D7 363 aa21.54■■□□□ 1.04
TRAPPC9-215ENST00000524162 SEPT11Q9NVA2 429 aaKnown RBP21.54■■□□□ 1.04
TRAPPC9-215ENST00000524162 VANGL2Q9ULK5 521 aa21.54■■□□□ 1.04
TRAPPC9-215ENST00000524162 DCHS1Q96JQ0 3298 aa21.54■■□□□ 1.04
TRAPPC9-215ENST00000524162 CACNA1AO00555 2505 aa21.53■■□□□ 1.04
TRAPPC9-215ENST00000524162 ANKRD62A6NC57 917 aa21.53■■□□□ 1.04
TRAPPC9-215ENST00000524162 EPHX1P07099 455 aa21.53■■□□□ 1.04
TRAPPC9-215ENST00000524162 PRKCHP24723 683 aa21.53■■□□□ 1.04
TRAPPC9-215ENST00000524162 RFC1P35251 1148 aaPredicted RBP21.53■■□□□ 1.04
TRAPPC9-215ENST00000524162 CSKP41240 450 aa21.53■■□□□ 1.04
TRAPPC9-215ENST00000524162 ZBED6P86452 979 aa21.53■■□□□ 1.04
TRAPPC9-215ENST00000524162 ZBTB16Q05516 673 aa21.53■■□□□ 1.04
TRAPPC9-215ENST00000524162 KLHL30Q0D2K2 578 aa21.53■■□□□ 1.04
TRAPPC9-215ENST00000524162 NFKBIBQ15653 356 aa21.53■■□□□ 1.04
TRAPPC9-215ENST00000524162 LPAL2Q16609 132 aa21.53■■□□□ 1.04
TRAPPC9-215ENST00000524162 PLA2G2CQ5R387 149 aa21.53■■□□□ 1.04
TRAPPC9-215ENST00000524162 E4F1Q66K89 784 aaPredicted RBP21.53■■□□□ 1.04
TRAPPC9-215ENST00000524162 CXorf57Q6NSI4 855 aaKnown RBP21.53■■□□□ 1.04
TRAPPC9-215ENST00000524162 LRRC31Q6UY01 552 aa21.53■■□□□ 1.04
TRAPPC9-215ENST00000524162 SETD3Q86TU7 594 aaPredicted RBP21.53■■□□□ 1.04
TRAPPC9-215ENST00000524162 EMC1Q8N766 993 aa21.53■■□□□ 1.04
TRAPPC9-215ENST00000524162 SORCS1Q8WY21 1168 aa21.53■■□□□ 1.04
TRAPPC9-215ENST00000524162 NTAN1Q96AB6 310 aa21.53■■□□□ 1.04
TRAPPC9-215ENST00000524162 MYO19Q96H55 970 aa21.53■■□□□ 1.04
TRAPPC9-215ENST00000524162 MKRN2Q9H000 416 aaKnown RBP21.53■■□□□ 1.04
TRAPPC9-215ENST00000524162 PRDM16Q9HAZ2 1276 aa21.53■■□□□ 1.04
TRAPPC9-215ENST00000524162 ANLNQ9NQW6 1124 aa21.53■■□□□ 1.04
TRAPPC9-215ENST00000524162 USP36Q9P275 1121 aaKnown RBP21.53■■□□□ 1.04
TRAPPC9-215ENST00000524162 PPARGC1AQ9UBK2 798 aaKnown RBP21.53■■□□□ 1.04
TRAPPC9-215ENST00000524162 NYNRINQ9P2P1 1898 aaKnown RBP21.52■■□□□ 1.04
TRAPPC9-215ENST00000524162 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP21.52■■□□□ 1.04
TRAPPC9-215ENST00000524162 PRR5-ARHGAP8B1AHC4 643 aa21.52■■□□□ 1.04
TRAPPC9-215ENST00000524162 ADRA1BP35368 520 aa21.52■■□□□ 1.04
TRAPPC9-215ENST00000524162 ZNF143P52747 638 aaPredicted RBP21.52■■□□□ 1.04
TRAPPC9-215ENST00000524162 COPAP53621 1224 aa21.52■■□□□ 1.04
TRAPPC9-215ENST00000524162 AIF1P55008 147 aa21.52■■□□□ 1.04
TRAPPC9-215ENST00000524162 ST8SIA6P61647 398 aa21.52■■□□□ 1.04
TRAPPC9-215ENST00000524162 ARHGAP8P85298 464 aa21.52■■□□□ 1.04
TRAPPC9-215ENST00000524162 LMNB2Q03252 620 aa21.52■■□□□ 1.04
TRAPPC9-215ENST00000524162 ZNF177Q13360 481 aaPredicted RBP21.52■■□□□ 1.04
TRAPPC9-215ENST00000524162 FNDC3BQ53EP0 1204 aaKnown RBP21.52■■□□□ 1.04
TRAPPC9-215ENST00000524162 DNAJC24Q6P3W2 148 aa21.52■■□□□ 1.04
TRAPPC9-215ENST00000524162 WDR59Q6PJI9 974 aa21.52■■□□□ 1.04
TRAPPC9-215ENST00000524162 LPCAT2Q7L5N7 544 aa21.52■■□□□ 1.04
TRAPPC9-215ENST00000524162 ZNF571Q7Z3V5 609 aaPredicted RBP21.52■■□□□ 1.04
TRAPPC9-215ENST00000524162 OR2T3Q8NH03 318 aa21.52■■□□□ 1.04
TRAPPC9-215ENST00000524162 JOSD2Q8TAC2 188 aa21.52■■□□□ 1.04
TRAPPC9-215ENST00000524162 ALG14Q96F25 216 aa21.52■■□□□ 1.04
TRAPPC9-215ENST00000524162 OSBPL2Q9H1P3 480 aa21.52■■□□□ 1.04
TRAPPC9-215ENST00000524162 ITM2CQ9NQX7 267 aa21.52■■□□□ 1.04
TRAPPC9-215ENST00000524162 IFNKQ9P0W0 207 aa21.52■■□□□ 1.04
TRAPPC9-215ENST00000524162 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.52■■□□□ 1.04
TRAPPC9-215ENST00000524162 RAD54BQ9Y620 910 aa21.52■■□□□ 1.04
TRAPPC9-215ENST00000524162 CXorf51AA0A1B0GTR3 108 aa21.51■■□□□ 1.03
TRAPPC9-215ENST00000524162 BCLAF3A2AJT9 711 aaKnown RBP21.51■■□□□ 1.03
TRAPPC9-215ENST00000524162 TARSL2A2RTX5 802 aaKnown RBP21.51■■□□□ 1.03
TRAPPC9-215ENST00000524162 DCLK1O15075 740 aa21.51■■□□□ 1.03
TRAPPC9-215ENST00000524162 CBFA2T2O43439 604 aa21.51■■□□□ 1.03
TRAPPC9-215ENST00000524162 ZNF806P0C7X5 589 aa21.51■■□□□ 1.03
TRAPPC9-215ENST00000524162 GPD1P21695 349 aa21.51■■□□□ 1.03
TRAPPC9-215ENST00000524162 SDHBP21912 280 aa21.51■■□□□ 1.03
TRAPPC9-215ENST00000524162 HOXD12P35452 270 aa21.51■■□□□ 1.03
TRAPPC9-215ENST00000524162 ATP11AP98196 1134 aa21.51■■□□□ 1.03
TRAPPC9-215ENST00000524162 ECT2LQ008S8 904 aa21.51■■□□□ 1.03
TRAPPC9-215ENST00000524162 SCAPQ12770 1279 aa21.51■■□□□ 1.03
TRAPPC9-215ENST00000524162 HNRNPA1L2Q32P51 320 aaKnown RBP21.51■■□□□ 1.03
TRAPPC9-215ENST00000524162 ARTNQ5T4W7 220 aa21.51■■□□□ 1.03
TRAPPC9-215ENST00000524162 PLEKHA7Q6IQ23 1121 aa21.51■■□□□ 1.03
TRAPPC9-215ENST00000524162 ZNF783Q6ZMS7 281 aa21.51■■□□□ 1.03
TRAPPC9-215ENST00000524162 C14orf80Q86SX3 495 aa21.51■■□□□ 1.03
TRAPPC9-215ENST00000524162 TMPRSS6Q8IU80 811 aa21.51■■□□□ 1.03
TRAPPC9-215ENST00000524162 DRC7Q8IY82 874 aa21.51■■□□□ 1.03
TRAPPC9-215ENST00000524162 CYB5D2Q8WUJ1 264 aa21.51■■□□□ 1.03
TRAPPC9-215ENST00000524162 MRGPRX3Q96LB0 322 aa21.51■■□□□ 1.03
TRAPPC9-215ENST00000524162 CNPY3Q9BT09 278 aa21.51■■□□□ 1.03
TRAPPC9-215ENST00000524162 SIK2Q9H0K1 926 aa21.51■■□□□ 1.03
TRAPPC9-215ENST00000524162 SEMA4GQ9NTN9 838 aa21.51■■□□□ 1.03
TRAPPC9-215ENST00000524162 PARVAQ9NVD7 372 aa21.51■■□□□ 1.03
TRAPPC9-215ENST00000524162 MBD1Q9UIS9 605 aaPredicted RBP21.51■■□□□ 1.03
TRAPPC9-215ENST00000524162 LUC7L2Q9Y383 392 aaKnown RBP21.51■■□□□ 1.03
TRAPPC9-215ENST00000524162 OR51B4Q9Y5P0 310 aa21.51■■□□□ 1.03
TRAPPC9-215ENST00000524162 IGHV1OR15-9A0A0B4J2B8 117 aa21.5■■□□□ 1.03
TRAPPC9-215ENST00000524162 AP5Z1O43299 807 aa21.5■■□□□ 1.03
TRAPPC9-215ENST00000524162 RTN2O75298 545 aa21.5■■□□□ 1.03
TRAPPC9-215ENST00000524162 MYBL1P10243 752 aa21.5■■□□□ 1.03
TRAPPC9-215ENST00000524162 DESP17661 470 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms