RNA–Protein interactions for RNA: ENST00000524028.1

PTP4A3-206, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 5 BASIC

Gene PTP4A3, Length 963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-206ENST00000524028 RWDD2AQ9UIY3 292 aa19.43■□□□□ 0.7
PTP4A3-206ENST00000524028 BTBD3Q9Y2F9 522 aa19.43■□□□□ 0.7
PTP4A3-206ENST00000524028 PCDHGB2Q9Y5G2 931 aa19.43■□□□□ 0.7
PTP4A3-206ENST00000524028 A0A1W2PP55 124 aa19.42■□□□□ 0.7
PTP4A3-206ENST00000524028 TAF4O00268 1085 aa19.42■□□□□ 0.7
PTP4A3-206ENST00000524028 MID1O15344 667 aa19.42■□□□□ 0.7
PTP4A3-206ENST00000524028 FGFR1OPO95684 399 aaKnown RBP19.42■□□□□ 0.7
PTP4A3-206ENST00000524028 APOEP02649 317 aa19.42■□□□□ 0.7
PTP4A3-206ENST00000524028 SRPRAP08240 638 aaKnown RBP19.42■□□□□ 0.7
PTP4A3-206ENST00000524028 USP8P40818 1118 aa19.42■□□□□ 0.7
PTP4A3-206ENST00000524028 GRIA4P48058 902 aa19.42■□□□□ 0.7
PTP4A3-206ENST00000524028 GALCP54803 685 aa19.42■□□□□ 0.7
PTP4A3-206ENST00000524028 ECT2LQ008S8 904 aa19.42■□□□□ 0.7
PTP4A3-206ENST00000524028 TEAD4Q15561 434 aa19.42■□□□□ 0.7
PTP4A3-206ENST00000524028 CST6Q15828 149 aa19.42■□□□□ 0.7
PTP4A3-206ENST00000524028 CAMK4Q16566 473 aa19.42■□□□□ 0.7
PTP4A3-206ENST00000524028 KIAA0895LQ68EN5 471 aa19.42■□□□□ 0.7
PTP4A3-206ENST00000524028 CIR1Q86X95 450 aaPredicted RBP19.42■□□□□ 0.7
PTP4A3-206ENST00000524028 CREBRFQ8IUR6 639 aa19.42■□□□□ 0.7
PTP4A3-206ENST00000524028 MMAAQ8IVH4 418 aaKnown RBP19.42■□□□□ 0.7
PTP4A3-206ENST00000524028 CCDC117Q8IWD4 279 aaPredicted RBP19.42■□□□□ 0.7
PTP4A3-206ENST00000524028 GANCQ8TET4 914 aa19.42■□□□□ 0.7
PTP4A3-206ENST00000524028 RPL10LQ96L21 214 aaKnown RBP19.42■□□□□ 0.7
PTP4A3-206ENST00000524028 CPXM1Q96SM3 734 aa19.42■□□□□ 0.7
PTP4A3-206ENST00000524028 NEUROG2Q9H2A3 272 aa19.42■□□□□ 0.7
PTP4A3-206ENST00000524028 EBF2Q9HAK2 575 aa19.42■□□□□ 0.7
PTP4A3-206ENST00000524028 TOR4AQ9NXH8 423 aa19.42■□□□□ 0.7
PTP4A3-206ENST00000524028 KIAA1468Q9P260 1216 aa19.42■□□□□ 0.7
PTP4A3-206ENST00000524028 AJAP1Q9UKB5 411 aaPredicted RBP19.42■□□□□ 0.7
PTP4A3-206ENST00000524028 SCML1Q9UN30 329 aa19.42■□□□□ 0.7
PTP4A3-206ENST00000524028 NCKAP1Q9Y2A7 1128 aa19.42■□□□□ 0.7
PTP4A3-206ENST00000524028 TARSL2A2RTX5 802 aaKnown RBP19.41■□□□□ 0.7
PTP4A3-206ENST00000524028 FAM47DPA6NHR8 397 aa19.41■□□□□ 0.7
PTP4A3-206ENST00000524028 KCNU1A8MYU2 1149 aa19.41■□□□□ 0.7
PTP4A3-206ENST00000524028 C10orf142B7Z368 130 aa19.41■□□□□ 0.7
PTP4A3-206ENST00000524028 STK19P49842 368 aaPredicted RBP19.41■□□□□ 0.7
PTP4A3-206ENST00000524028 PASD1Q8IV76 773 aa19.41■□□□□ 0.7
PTP4A3-206ENST00000524028 DEFB106AQ8N104 65 aa19.41■□□□□ 0.7
PTP4A3-206ENST00000524028 RHBDD1Q8TEB9 315 aa19.41■□□□□ 0.7
PTP4A3-206ENST00000524028 SHC3Q92529 594 aa19.41■□□□□ 0.7
PTP4A3-206ENST00000524028 PTPRN2Q92932 1015 aa19.41■□□□□ 0.7
PTP4A3-206ENST00000524028 SLC2A13Q96QE2 648 aa19.41■□□□□ 0.7
PTP4A3-206ENST00000524028 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.41■□□□□ 0.7
PTP4A3-206ENST00000524028 APEX2Q9UBZ4 518 aa19.41■□□□□ 0.7
PTP4A3-206ENST00000524028 APOBEC2Q9Y235 224 aaKnown RBP19.41■□□□□ 0.7
PTP4A3-206ENST00000524028 ITIH6Q6UXX5 1313 aa19.41■□□□□ 0.7
PTP4A3-206ENST00000524028 H0Y8X5 98 aa19.4■□□□□ 0.7
PTP4A3-206ENST00000524028 FLRT2O43155 660 aa19.4■□□□□ 0.7
PTP4A3-206ENST00000524028 RNASEH1O60930 286 aaKnown RBP19.4■□□□□ 0.7
PTP4A3-206ENST00000524028 MOCS3O95396 460 aa19.4■□□□□ 0.7
PTP4A3-206ENST00000524028 ATXN1LP0C7T5 689 aaKnown RBP19.4■□□□□ 0.7
PTP4A3-206ENST00000524028 VAV1P15498 845 aa19.4■□□□□ 0.7
PTP4A3-206ENST00000524028 PON1P27169 355 aa19.4■□□□□ 0.7
PTP4A3-206ENST00000524028 MZF1P28698 734 aaPredicted RBP19.4■□□□□ 0.7
PTP4A3-206ENST00000524028 SLC8A1P32418 973 aa19.4■□□□□ 0.7
PTP4A3-206ENST00000524028 CTSKP43235 329 aa19.4■□□□□ 0.7
PTP4A3-206ENST00000524028 NCEH1Q6PIU2 408 aa19.4■□□□□ 0.7
PTP4A3-206ENST00000524028 CCNI2Q6ZMN8 369 aaPredicted RBP19.4■□□□□ 0.7
PTP4A3-206ENST00000524028 GBP6Q6ZN66 633 aa19.4■□□□□ 0.7
PTP4A3-206ENST00000524028 CCAR2Q8N163 923 aaKnown RBP19.4■□□□□ 0.7
PTP4A3-206ENST00000524028 STK40Q8N2I9 435 aa19.4■□□□□ 0.7
PTP4A3-206ENST00000524028 AADATQ8N5Z0 425 aa19.4■□□□□ 0.7
PTP4A3-206ENST00000524028 ATP6V0D2Q8N8Y2 350 aa19.4■□□□□ 0.7
PTP4A3-206ENST00000524028 PPP1R13BQ96KQ4 1090 aa19.4■□□□□ 0.7
PTP4A3-206ENST00000524028 SIX2Q9NPC8 291 aa19.4■□□□□ 0.7
PTP4A3-206ENST00000524028 CEP83Q9Y592 693 aa19.4■□□□□ 0.7
PTP4A3-206ENST00000524028 PKD1L2Q7Z442 2459 aa19.4■□□□□ 0.7
PTP4A3-206ENST00000524028 DMXL2Q8TDJ6 3036 aa19.39■□□□□ 0.69
PTP4A3-206ENST00000524028 SYNJ2BP-COX16A0A087WUM0 186 aa19.39■□□□□ 0.69
PTP4A3-206ENST00000524028 EDDM13A0A1B0GTR0 161 aa19.39■□□□□ 0.69
PTP4A3-206ENST00000524028 A0A1W2PPC4 97 aa19.39■□□□□ 0.69
PTP4A3-206ENST00000524028 F5H5T6 163 aa19.39■□□□□ 0.69
PTP4A3-206ENST00000524028 GRAP2O75791 330 aa19.39■□□□□ 0.69
PTP4A3-206ENST00000524028 RNASEH2AO75792 299 aaKnown RBP19.39■□□□□ 0.69
PTP4A3-206ENST00000524028 DKK1O94907 266 aa19.39■□□□□ 0.69
PTP4A3-206ENST00000524028 PDGFRAP16234 1089 aa19.39■□□□□ 0.69
PTP4A3-206ENST00000524028 CDK17Q00537 523 aa19.39■□□□□ 0.69
PTP4A3-206ENST00000524028 KCNJ12Q14500 433 aa19.39■□□□□ 0.69
PTP4A3-206ENST00000524028 CXorf57Q6NSI4 855 aaKnown RBP19.39■□□□□ 0.69
PTP4A3-206ENST00000524028 IGSF8Q969P0 613 aa19.39■□□□□ 0.69
PTP4A3-206ENST00000524028 FAM81BQ96LP2 452 aa19.39■□□□□ 0.69
PTP4A3-206ENST00000524028 SLC6A18Q96N87 628 aa19.39■□□□□ 0.69
PTP4A3-206ENST00000524028 OMDQ99983 421 aa19.39■□□□□ 0.69
PTP4A3-206ENST00000524028 FAM204AQ9H8W3 233 aa19.39■□□□□ 0.69
PTP4A3-206ENST00000524028 DDIT4Q9NX09 232 aa19.39■□□□□ 0.69
PTP4A3-206ENST00000524028 COX16Q9P0S2 106 aa19.39■□□□□ 0.69
PTP4A3-206ENST00000524028 ADAMTS1Q9UHI8 967 aa19.39■□□□□ 0.69
PTP4A3-206ENST00000524028 PCDHGC3Q9UN70 934 aa19.39■□□□□ 0.69
PTP4A3-206ENST00000524028 WNT9AO14904 365 aa19.38■□□□□ 0.69
PTP4A3-206ENST00000524028 ERBB2P04626 1255 aa19.38■□□□□ 0.69
PTP4A3-206ENST00000524028 WNT1P04628 370 aa19.38■□□□□ 0.69
PTP4A3-206ENST00000524028 GLI1P08151 1106 aa19.38■□□□□ 0.69
PTP4A3-206ENST00000524028 PSMD8P48556 350 aa19.38■□□□□ 0.69
PTP4A3-206ENST00000524028 IRAK1P51617 712 aa19.38■□□□□ 0.69
PTP4A3-206ENST00000524028 PLK1P53350 603 aa19.38■□□□□ 0.69
PTP4A3-206ENST00000524028 RACK1P63244 317 aaKnown RBP19.38■□□□□ 0.69
PTP4A3-206ENST00000524028 IL9RQ01113 521 aa19.38■□□□□ 0.69
PTP4A3-206ENST00000524028 CENPCQ03188 943 aa19.38■□□□□ 0.69
PTP4A3-206ENST00000524028 SCAPQ12770 1279 aa19.38■□□□□ 0.69
PTP4A3-206ENST00000524028 SUZ12Q15022 739 aaKnown RBP19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms