RNA–Protein interactions for RNA: ENST00000523961.5

CCNC-216, Transcript of cyclin C, humanhuman

TSL 5

Gene CCNC, Length 1,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-216ENST00000523961 TMEM92Q6UXU6 159 aa12.91□□□□□ -0.34
CCNC-216ENST00000523961 ADIPOR2Q86V24 386 aa12.91□□□□□ -0.34
CCNC-216ENST00000523961 WDR5BQ86VZ2 330 aa12.91□□□□□ -0.34
CCNC-216ENST00000523961 CIR1Q86X95 450 aaPredicted RBP12.91□□□□□ -0.34
CCNC-216ENST00000523961 ZNF683Q8IZ20 524 aa12.91□□□□□ -0.34
CCNC-216ENST00000523961 CCDC42Q96M95 316 aa12.91□□□□□ -0.34
CCNC-216ENST00000523961 PPP1R9BQ96SB3 815 aa12.91□□□□□ -0.34
CCNC-216ENST00000523961 GABRG3Q99928 467 aa12.91□□□□□ -0.34
CCNC-216ENST00000523961 NCAPGQ9BPX3 1015 aa12.91□□□□□ -0.34
CCNC-216ENST00000523961 THAP2Q9H0W7 228 aa12.91□□□□□ -0.34
CCNC-216ENST00000523961 OSBPL2Q9H1P3 480 aa12.91□□□□□ -0.34
CCNC-216ENST00000523961 CACNA2D2Q9NY47 1150 aa12.91□□□□□ -0.34
CCNC-216ENST00000523961 EBF1Q9UH73 591 aa12.91□□□□□ -0.34
CCNC-216ENST00000523961 NENFQ9UMX5 172 aa12.91□□□□□ -0.34
CCNC-216ENST00000523961 PLA2G4CQ9UP65 541 aa12.91□□□□□ -0.34
CCNC-216ENST00000523961 SNX10Q9Y5X0 201 aa12.91□□□□□ -0.34
CCNC-216ENST00000523961 STON1Q9Y6Q2 735 aa12.91□□□□□ -0.34
CCNC-216ENST00000523961 IGLV3-10A0A075B6K4 115 aa12.9□□□□□ -0.34
CCNC-216ENST00000523961 AXIN1O15169 862 aa12.9□□□□□ -0.34
CCNC-216ENST00000523961 SRGAP2O75044 1071 aa12.9□□□□□ -0.34
CCNC-216ENST00000523961 RNF8O76064 485 aa12.9□□□□□ -0.34
CCNC-216ENST00000523961 CYP1A2P05177 515 aa12.9□□□□□ -0.34
CCNC-216ENST00000523961 DLDP09622 509 aaKnown RBP12.9□□□□□ -0.34
CCNC-216ENST00000523961 HOXC13P31276 330 aa12.9□□□□□ -0.34
CCNC-216ENST00000523961 CSKP41240 450 aa12.9□□□□□ -0.34
CCNC-216ENST00000523961 PXNP49023 591 aaPredicted RBP12.9□□□□□ -0.34
CCNC-216ENST00000523961 IRAK1P51617 712 aa12.9□□□□□ -0.34
CCNC-216ENST00000523961 GALCP54803 685 aa12.9□□□□□ -0.34
CCNC-216ENST00000523961 GFPT1Q06210 699 aaPredicted RBP12.9□□□□□ -0.34
CCNC-216ENST00000523961 SCAPQ12770 1279 aa12.9□□□□□ -0.34
CCNC-216ENST00000523961 ENPP2Q13822 863 aa12.9□□□□□ -0.34
CCNC-216ENST00000523961 STARD3Q14849 445 aa12.9□□□□□ -0.34
CCNC-216ENST00000523961 PLEKHG6Q3KR16 790 aa12.9□□□□□ -0.34
CCNC-216ENST00000523961 FUT11Q495W5 492 aa12.9□□□□□ -0.34
CCNC-216ENST00000523961 PITRM1Q5JRX3 1037 aa12.9□□□□□ -0.34
CCNC-216ENST00000523961 EFHC2Q5JST6 749 aa12.9□□□□□ -0.34
CCNC-216ENST00000523961 CXorf57Q6NSI4 855 aaKnown RBP12.9□□□□□ -0.34
CCNC-216ENST00000523961 SERPINA13PQ6UXR4 307 aa12.9□□□□□ -0.34
CCNC-216ENST00000523961 SLFN11Q7Z7L1 901 aa12.9□□□□□ -0.34
CCNC-216ENST00000523961 CCDC185Q8N715 623 aa12.9□□□□□ -0.34
CCNC-216ENST00000523961 TC2NQ8N9U0 490 aa12.9□□□□□ -0.34
CCNC-216ENST00000523961 SORCS1Q8WY21 1168 aa12.9□□□□□ -0.34
CCNC-216ENST00000523961 TTC17Q96AE7 1141 aa12.9□□□□□ -0.34
CCNC-216ENST00000523961 CHP1Q99653 195 aa12.9□□□□□ -0.34
CCNC-216ENST00000523961 NHEJ1Q9H9Q4 299 aaPredicted RBP12.9□□□□□ -0.34
CCNC-216ENST00000523961 PPARGC1AQ9UBK2 798 aaKnown RBP12.9□□□□□ -0.34
CCNC-216ENST00000523961 OR12D3Q9UGF7 316 aa12.9□□□□□ -0.34
CCNC-216ENST00000523961 INTS6Q9UL03 887 aaKnown RBP12.9□□□□□ -0.34
CCNC-216ENST00000523961 WDFY4Q6ZS81 3184 aa12.9□□□□□ -0.34
CCNC-216ENST00000523961 TCRBV21S2A2A0A5A6 115 aa12.89□□□□□ -0.35
CCNC-216ENST00000523961 WASH3PC4AMC7 463 aa12.89□□□□□ -0.35
CCNC-216ENST00000523961 CNTN5O94779 1100 aa12.89□□□□□ -0.35
CCNC-216ENST00000523961 H2AFZP0C0S5 128 aa12.89□□□□□ -0.35
CCNC-216ENST00000523961 IL12RB1P42701 662 aa12.89□□□□□ -0.35
CCNC-216ENST00000523961 PLK1P53350 603 aa12.89□□□□□ -0.35
CCNC-216ENST00000523961 ACAP1Q15027 740 aa12.89□□□□□ -0.35
CCNC-216ENST00000523961 FNDC3BQ53EP0 1204 aaKnown RBP12.89□□□□□ -0.35
CCNC-216ENST00000523961 ALFQ53S48 1182 aa12.89□□□□□ -0.35
CCNC-216ENST00000523961 ANO7Q6IWH7 933 aa12.89□□□□□ -0.35
CCNC-216ENST00000523961 H2AFVQ71UI9 128 aa12.89□□□□□ -0.35
CCNC-216ENST00000523961 SETD3Q86TU7 594 aaPredicted RBP12.89□□□□□ -0.35
CCNC-216ENST00000523961 RASSF3Q86WH2 238 aa12.89□□□□□ -0.35
CCNC-216ENST00000523961 CYB5D2Q8WUJ1 264 aa12.89□□□□□ -0.35
CCNC-216ENST00000523961 CTNNBL1Q8WYA6 563 aaPredicted RBP12.89□□□□□ -0.35
CCNC-216ENST00000523961 NKD2Q969F2 451 aaPredicted RBP12.89□□□□□ -0.35
CCNC-216ENST00000523961 PHOX2BQ99453 314 aa12.89□□□□□ -0.35
CCNC-216ENST00000523961 TRIM7Q9C029 511 aa12.89□□□□□ -0.35
CCNC-216ENST00000523961 ZYG11BQ9C0D3 744 aa12.89□□□□□ -0.35
CCNC-216ENST00000523961 RETREG1Q9H6L5 497 aa12.89□□□□□ -0.35
CCNC-216ENST00000523961 MPP6Q9NZW5 540 aa12.89□□□□□ -0.35
CCNC-216ENST00000523961 TBC1D30Q9Y2I9 924 aa12.89□□□□□ -0.35
CCNC-216ENST00000523961 A0A1W2PQF6 199 aa12.88□□□□□ -0.35
CCNC-216ENST00000523961 SYNCRIPO60506 623 aaKnown RBP12.88□□□□□ -0.35
CCNC-216ENST00000523961 RHOCP08134 193 aa12.88□□□□□ -0.35
CCNC-216ENST00000523961 SRPRAP08240 638 aaKnown RBP12.88□□□□□ -0.35
CCNC-216ENST00000523961 MZF1P28698 734 aaPredicted RBP12.88□□□□□ -0.35
CCNC-216ENST00000523961 L1CAMP32004 1257 aa12.88□□□□□ -0.35
CCNC-216ENST00000523961 ST8SIA6P61647 398 aa12.88□□□□□ -0.35
CCNC-216ENST00000523961 SULT2A1Q06520 285 aa12.88□□□□□ -0.35
CCNC-216ENST00000523961 ZNF252P-AS1Q0IIN9 211 aa12.88□□□□□ -0.35
CCNC-216ENST00000523961 PIGHQ14442 188 aaPredicted RBP12.88□□□□□ -0.35
CCNC-216ENST00000523961 PTPRNQ16849 979 aa12.88□□□□□ -0.35
CCNC-216ENST00000523961 ARTNQ5T4W7 220 aa12.88□□□□□ -0.35
CCNC-216ENST00000523961 C6orf118Q5T5N4 469 aa12.88□□□□□ -0.35
CCNC-216ENST00000523961 MANEALQ5VSG8 457 aa12.88□□□□□ -0.35
CCNC-216ENST00000523961 TFAP2DQ7Z6R9 452 aa12.88□□□□□ -0.35
CCNC-216ENST00000523961 APCDD1Q8J025 514 aa12.88□□□□□ -0.35
CCNC-216ENST00000523961 KDM1BQ8NB78 822 aa12.88□□□□□ -0.35
CCNC-216ENST00000523961 MDGA1Q8NFP4 955 aa12.88□□□□□ -0.35
CCNC-216ENST00000523961 HMGB4Q8WW32 186 aa12.88□□□□□ -0.35
CCNC-216ENST00000523961 TBC1D31Q96DN5 1066 aa12.88□□□□□ -0.35
CCNC-216ENST00000523961 ARHGEF26Q96DR7 871 aa12.88□□□□□ -0.35
CCNC-216ENST00000523961 FEM1AQ9BSK4 669 aa12.88□□□□□ -0.35
CCNC-216ENST00000523961 NUP85Q9BW27 656 aa12.88□□□□□ -0.35
CCNC-216ENST00000523961 BCCIPQ9P287 314 aaKnown RBP eCLIP12.88□□□□□ -0.35
CCNC-216ENST00000523961 IP6K2Q9UHH9 426 aa12.88□□□□□ -0.35
CCNC-216ENST00000523961 FZD10Q9ULW2 581 aa12.88□□□□□ -0.35
CCNC-216ENST00000523961 RAD54BQ9Y620 910 aa12.88□□□□□ -0.35
CCNC-216ENST00000523961 FANCMQ8IYD8 2048 aa12.88□□□□□ -0.35
CCNC-216ENST00000523961 EIF3CLB5ME19 914 aaKnown RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms