RNA–Protein interactions for RNA: ENST00000523338.5

TNIP1-218, Transcript of TNFAIP3 interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNIP1, Length 2,711 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-218ENST00000523338 ITGA2BP08514 1039 aa12.87□□□□□ -0.35
TNIP1-218ENST00000523338 MAGEA6P43360 314 aa12.87□□□□□ -0.35
TNIP1-218ENST00000523338 MXRA7P84157 204 aa12.87□□□□□ -0.35
TNIP1-218ENST00000523338 ZBTB17Q13105 803 aa12.87□□□□□ -0.35
TNIP1-218ENST00000523338 PDK1Q15118 436 aa12.87□□□□□ -0.35
TNIP1-218ENST00000523338 ARHGAP36Q6ZRI8 547 aa12.87□□□□□ -0.35
TNIP1-218ENST00000523338 OTOP3Q7RTS5 596 aa12.87□□□□□ -0.35
TNIP1-218ENST00000523338 FAM35AQ86V20 835 aa12.87□□□□□ -0.35
TNIP1-218ENST00000523338 CRLF3Q8IUI8 442 aa12.87□□□□□ -0.35
TNIP1-218ENST00000523338 SLC25A41Q8N5S1 370 aa12.87□□□□□ -0.35
TNIP1-218ENST00000523338 INPP5DQ92835 1189 aa12.87□□□□□ -0.35
TNIP1-218ENST00000523338 PPP1R10Q96QC0 940 aaKnown RBP12.87□□□□□ -0.35
TNIP1-218ENST00000523338 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.87□□□□□ -0.35
TNIP1-218ENST00000523338 TMEM216Q9P0N5 145 aa12.87□□□□□ -0.35
TNIP1-218ENST00000523338 ZNF180Q9UJW8 692 aa12.87□□□□□ -0.35
TNIP1-218ENST00000523338 EMCNQ9ULC0 261 aa12.87□□□□□ -0.35
TNIP1-218ENST00000523338 SHROOM3Q8TF72 1996 aa12.87□□□□□ -0.35
TNIP1-218ENST00000523338 PRR5-ARHGAP8B1AHC4 643 aa12.87□□□□□ -0.35
TNIP1-218ENST00000523338 GSC2O15499 205 aa12.87□□□□□ -0.35
TNIP1-218ENST00000523338 CCDC22O60826 627 aa12.87□□□□□ -0.35
TNIP1-218ENST00000523338 DAB1O75553 588 aa12.87□□□□□ -0.35
TNIP1-218ENST00000523338 KRT36O76013 467 aa12.87□□□□□ -0.35
TNIP1-218ENST00000523338 THP07101 528 aa12.87□□□□□ -0.35
TNIP1-218ENST00000523338 PTPN3P26045 913 aa12.87□□□□□ -0.35
TNIP1-218ENST00000523338 PGFP49763 221 aa12.87□□□□□ -0.35
TNIP1-218ENST00000523338 CPT1AP50416 773 aa12.87□□□□□ -0.35
TNIP1-218ENST00000523338 ARHGAP8P85298 464 aa12.87□□□□□ -0.35
TNIP1-218ENST00000523338 IRF9Q00978 393 aa12.87□□□□□ -0.35
TNIP1-218ENST00000523338 PARP6Q2NL67 630 aa12.87□□□□□ -0.35
TNIP1-218ENST00000523338 LRRC8BQ6P9F7 803 aa12.87□□□□□ -0.35
TNIP1-218ENST00000523338 PLD6Q8N2A8 252 aaKnown RBP12.87□□□□□ -0.35
TNIP1-218ENST00000523338 LRRC39Q96DD0 335 aa12.87□□□□□ -0.35
TNIP1-218ENST00000523338 FRMD8Q9BZ67 464 aaPredicted RBP12.87□□□□□ -0.35
TNIP1-218ENST00000523338 ATXN3LQ9H3M9 355 aa12.87□□□□□ -0.35
TNIP1-218ENST00000523338 WDCPQ9H6R7 721 aa12.87□□□□□ -0.35
TNIP1-218ENST00000523338 AGO3Q9H9G7 860 aaKnown RBP12.87□□□□□ -0.35
TNIP1-218ENST00000523338 PNPOQ9NVS9 261 aa12.87□□□□□ -0.35
TNIP1-218ENST00000523338 OR12D3Q9UGF7 316 aa12.87□□□□□ -0.35
TNIP1-218ENST00000523338 DNAJC16Q9Y2G8 782 aa12.87□□□□□ -0.35
TNIP1-218ENST00000523338 ZSWIM8A7E2V4 1837 aa12.87□□□□□ -0.35
TNIP1-218ENST00000523338 DFFAO00273 331 aa12.86□□□□□ -0.35
TNIP1-218ENST00000523338 DNAJC6O75061 913 aa12.86□□□□□ -0.35
TNIP1-218ENST00000523338 WARSP23381 471 aaKnown RBP12.86□□□□□ -0.35
TNIP1-218ENST00000523338 PURAQ00577 322 aaKnown RBP12.86□□□□□ -0.35
TNIP1-218ENST00000523338 OCRLQ01968 901 aa12.86□□□□□ -0.35
TNIP1-218ENST00000523338 TIGD5Q53EQ6 642 aa12.86□□□□□ -0.35
TNIP1-218ENST00000523338 AP1ARQ63HQ0 302 aa12.86□□□□□ -0.35
TNIP1-218ENST00000523338 ATG16L1Q676U5 607 aa12.86□□□□□ -0.35
TNIP1-218ENST00000523338 STRA8Q7Z7C7 330 aa12.86□□□□□ -0.35
TNIP1-218ENST00000523338 SPATA6LQ8N4H0 392 aa12.86□□□□□ -0.35
TNIP1-218ENST00000523338 EFCAB3Q8N7B9 438 aa12.86□□□□□ -0.35
TNIP1-218ENST00000523338 SPATA22Q8NHS9 363 aa12.86□□□□□ -0.35
TNIP1-218ENST00000523338 GORASP1Q9BQQ3 440 aa12.86□□□□□ -0.35
TNIP1-218ENST00000523338 RNPEPL1Q9HAU8 725 aa12.86□□□□□ -0.35
TNIP1-218ENST00000523338 WDR6Q9NNW5 1121 aaKnown RBP12.86□□□□□ -0.35
TNIP1-218ENST00000523338 MAN1C1Q9NR34 630 aa12.86□□□□□ -0.35
TNIP1-218ENST00000523338 FAM105AQ9NUU6 356 aa12.86□□□□□ -0.35
TNIP1-218ENST00000523338 G3BP2Q9UN86 482 aaKnown RBP12.86□□□□□ -0.35
TNIP1-218ENST00000523338 EME2A4GXA9 379 aaPredicted RBP12.86□□□□□ -0.35
TNIP1-218ENST00000523338 MSI1O43347 362 aaKnown RBP12.86□□□□□ -0.35
TNIP1-218ENST00000523338 NFKB1P19838 968 aa12.86□□□□□ -0.35
TNIP1-218ENST00000523338 ARRB2P32121 409 aa12.86□□□□□ -0.35
TNIP1-218ENST00000523338 CRHR1P34998 444 aa12.86□□□□□ -0.35
TNIP1-218ENST00000523338 AVPR1AP37288 418 aa12.86□□□□□ -0.35
TNIP1-218ENST00000523338 ZNF157P51786 506 aaPredicted RBP12.86□□□□□ -0.35
TNIP1-218ENST00000523338 DAOAP59103 153 aa12.86□□□□□ -0.35
TNIP1-218ENST00000523338 CDC42EP1Q00587 391 aa12.86□□□□□ -0.35
TNIP1-218ENST00000523338 CACNB2Q08289 660 aaPredicted RBP12.86□□□□□ -0.35
TNIP1-218ENST00000523338 DPYSQ14117 519 aa12.86□□□□□ -0.35
TNIP1-218ENST00000523338 TAF11Q15544 211 aa12.86□□□□□ -0.35
TNIP1-218ENST00000523338 TEX44Q53QW1 395 aa12.86□□□□□ -0.35
TNIP1-218ENST00000523338 MORN1Q5T089 497 aa12.86□□□□□ -0.35
TNIP1-218ENST00000523338 GDF6Q6KF10 455 aaPredicted RBP12.86□□□□□ -0.35
TNIP1-218ENST00000523338 TOP6BLQ8N6T0 577 aa12.86□□□□□ -0.35
TNIP1-218ENST00000523338 CDKL2Q92772 493 aa12.86□□□□□ -0.35
TNIP1-218ENST00000523338 ATP2A3Q93084 1043 aa12.86□□□□□ -0.35
TNIP1-218ENST00000523338 RSRC1Q96IZ7 334 aaKnown RBP12.86□□□□□ -0.35
TNIP1-218ENST00000523338 TMLHEQ9NVH6 421 aa12.86□□□□□ -0.35
TNIP1-218ENST00000523338 SIRPGQ9P1W8 387 aa12.86□□□□□ -0.35
TNIP1-218ENST00000523338 DCLK1O15075 740 aa12.85□□□□□ -0.35
TNIP1-218ENST00000523338 OPHN1O60890 802 aa12.85□□□□□ -0.35
TNIP1-218ENST00000523338 COQ9O75208 318 aa12.85□□□□□ -0.35
TNIP1-218ENST00000523338 MOCS2O96007 188 aaPredicted RBP12.85□□□□□ -0.35
TNIP1-218ENST00000523338 GSRP00390 522 aa12.85□□□□□ -0.35
TNIP1-218ENST00000523338 LTFP02788 710 aa12.85□□□□□ -0.35
TNIP1-218ENST00000523338 ITGB1P05556 798 aa12.85□□□□□ -0.35
TNIP1-218ENST00000523338 POLBP06746 335 aa12.85□□□□□ -0.35
TNIP1-218ENST00000523338 TPBGLP0DKB5 382 aa12.85□□□□□ -0.35
TNIP1-218ENST00000523338 PGAM1P18669 254 aa12.85□□□□□ -0.35
TNIP1-218ENST00000523338 AXLP30530 894 aa12.85□□□□□ -0.35
TNIP1-218ENST00000523338 FDFT1P37268 417 aa12.85□□□□□ -0.35
TNIP1-218ENST00000523338 ITGA9Q13797 1035 aa12.85□□□□□ -0.35
TNIP1-218ENST00000523338 SDHAF4Q5VUM1 108 aa12.85□□□□□ -0.35
TNIP1-218ENST00000523338 CST9Q5W186 159 aa12.85□□□□□ -0.35
TNIP1-218ENST00000523338 TLDC1Q6P9B6 456 aa12.85□□□□□ -0.35
TNIP1-218ENST00000523338 SMC1BQ8NDV3 1235 aa12.85□□□□□ -0.35
TNIP1-218ENST00000523338 FAM161BQ96MY7 647 aa12.85□□□□□ -0.35
TNIP1-218ENST00000523338 COLEC11Q9BWP8 271 aa12.85□□□□□ -0.35
TNIP1-218ENST00000523338 SFMBT1Q9UHJ3 866 aa12.85□□□□□ -0.35
TNIP1-218ENST00000523338 VANGL2Q9ULK5 521 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms