RNA–Protein interactions for RNA: ENST00000523139.5

BRD9-219, Transcript of bromodomain containing 9, humanhuman

TSL 3

Gene BRD9, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-219ENST00000523139 TMA16Q96EY4 203 aaKnown RBP6.5□□□□□ -1.37
BRD9-219ENST00000523139 MYADMQ96S97 322 aa6.5□□□□□ -1.37
BRD9-219ENST00000523139 CALN1Q9BXU9 219 aa6.5□□□□□ -1.37
BRD9-219ENST00000523139 MAK16Q9BXY0 300 aaKnown RBP6.5□□□□□ -1.37
BRD9-219ENST00000523139 KLC2Q9H0B6 622 aa6.5□□□□□ -1.37
BRD9-219ENST00000523139 MAGEH1Q9H213 219 aa6.5□□□□□ -1.37
BRD9-219ENST00000523139 SLITRK6Q9H5Y7 841 aa6.5□□□□□ -1.37
BRD9-219ENST00000523139 SPHK2Q9NRA0 654 aa6.5□□□□□ -1.37
BRD9-219ENST00000523139 CFAP97Q9P2B7 532 aa6.5□□□□□ -1.37
BRD9-219ENST00000523139 PCYOX1Q9UHG3 505 aa6.5□□□□□ -1.37
BRD9-219ENST00000523139 CCL26Q9Y258 94 aa6.5□□□□□ -1.37
BRD9-219ENST00000523139 SLC27A6Q9Y2P4 619 aa6.5□□□□□ -1.37
BRD9-219ENST00000523139 KIAA1549LQ6ZVL6 1849 aa6.5□□□□□ -1.37
BRD9-219ENST00000523139 COL4A2P08572 1712 aa6.5□□□□□ -1.37
BRD9-219ENST00000523139 BCLAF3A2AJT9 711 aaKnown RBP6.49□□□□□ -1.37
BRD9-219ENST00000523139 ZSCAN5CA6NGD5 496 aaPredicted RBP6.49□□□□□ -1.37
BRD9-219ENST00000523139 HEPACAM2A8MVW5 462 aa6.49□□□□□ -1.37
BRD9-219ENST00000523139 LOC730098B7Z3J9 87 aa6.49□□□□□ -1.37
BRD9-219ENST00000523139 ARNTLO00327 626 aa6.49□□□□□ -1.37
BRD9-219ENST00000523139 APOL1O14791 398 aa6.49□□□□□ -1.37
BRD9-219ENST00000523139 CEP104O60308 925 aa6.49□□□□□ -1.37
BRD9-219ENST00000523139 CACNG3O60359 315 aa6.49□□□□□ -1.37
BRD9-219ENST00000523139 CST8O60676 142 aa6.49□□□□□ -1.37
BRD9-219ENST00000523139 URI1O94763 535 aaPredicted RBP6.49□□□□□ -1.37
BRD9-219ENST00000523139 CSPG5O95196 566 aa6.49□□□□□ -1.37
BRD9-219ENST00000523139 LUC7L3O95232 432 aaKnown RBP6.49□□□□□ -1.37
BRD9-219ENST00000523139 ADH1CP00326 375 aa6.49□□□□□ -1.37
BRD9-219ENST00000523139 ITGAVP06756 1048 aa6.49□□□□□ -1.37
BRD9-219ENST00000523139 CD48P09326 243 aa6.49□□□□□ -1.37
BRD9-219ENST00000523139 KCNA5P22460 613 aa6.49□□□□□ -1.37
BRD9-219ENST00000523139 CCNCP24863 283 aa6.49□□□□□ -1.37
BRD9-219ENST00000523139 HOXD9P28356 352 aaPredicted RBP6.49□□□□□ -1.37
BRD9-219ENST00000523139 SLC6A4P31645 630 aa6.49□□□□□ -1.37
BRD9-219ENST00000523139 GAD2Q05329 585 aa6.49□□□□□ -1.37
BRD9-219ENST00000523139 SLC20A2Q08357 652 aa6.49□□□□□ -1.37
BRD9-219ENST00000523139 GALNT2Q10471 571 aa6.49□□□□□ -1.37
BRD9-219ENST00000523139 NR1H3Q13133 447 aa6.49□□□□□ -1.37
BRD9-219ENST00000523139 CBLBQ13191 982 aa6.49□□□□□ -1.37
BRD9-219ENST00000523139 DHX34Q14147 1143 aaKnown RBP6.49□□□□□ -1.37
BRD9-219ENST00000523139 RFTN1Q14699 578 aaPredicted RBP6.49□□□□□ -1.37
BRD9-219ENST00000523139 PDK1Q15118 436 aa6.49□□□□□ -1.37
BRD9-219ENST00000523139 NOMO1Q15155 1222 aa6.49□□□□□ -1.37
BRD9-219ENST00000523139 OASLQ15646 514 aaKnown RBP6.49□□□□□ -1.37
BRD9-219ENST00000523139 PPP6R3Q5H9R7 873 aaPredicted RBP6.49□□□□□ -1.37
BRD9-219ENST00000523139 CCDC181Q5TID7 509 aa6.49□□□□□ -1.37
BRD9-219ENST00000523139 RAP1GAP2Q684P5 730 aa6.49□□□□□ -1.37
BRD9-219ENST00000523139 NCBP2-AS2Q69YL0 99 aa6.49□□□□□ -1.37
BRD9-219ENST00000523139 TMCO3Q6UWJ1 677 aa6.49□□□□□ -1.37
BRD9-219ENST00000523139 VITQ6UXI7 678 aa6.49□□□□□ -1.37
BRD9-219ENST00000523139 SYDE1Q6ZW31 735 aaPredicted RBP6.49□□□□□ -1.37
BRD9-219ENST00000523139 Q7L0L9 218 aa6.49□□□□□ -1.37
BRD9-219ENST00000523139 GET4Q7L5D6 327 aaPredicted RBP6.49□□□□□ -1.37
BRD9-219ENST00000523139 ANKS1BQ7Z6G8 1248 aa6.49□□□□□ -1.37
BRD9-219ENST00000523139 CCDC50Q8IVM0 306 aa6.49□□□□□ -1.37
BRD9-219ENST00000523139 BBS7Q8IWZ6 715 aa6.49□□□□□ -1.37
BRD9-219ENST00000523139 PYROXD2Q8N2H3 581 aa6.49□□□□□ -1.37
BRD9-219ENST00000523139 MMGT1Q8N4V1 131 aa6.49□□□□□ -1.37
BRD9-219ENST00000523139 TDRD5Q8NAT2 981 aaKnown RBP6.49□□□□□ -1.37
BRD9-219ENST00000523139 SPATA4Q8NEY3 305 aa6.49□□□□□ -1.37
BRD9-219ENST00000523139 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.49□□□□□ -1.37
BRD9-219ENST00000523139 CASKIN2Q8WXE0 1202 aa6.49□□□□□ -1.37
BRD9-219ENST00000523139 RUBCNQ92622 972 aa6.49□□□□□ -1.37
BRD9-219ENST00000523139 P3H4Q92791 437 aa6.49□□□□□ -1.37
BRD9-219ENST00000523139 IGSF8Q969P0 613 aa6.49□□□□□ -1.37
BRD9-219ENST00000523139 HAUS1Q96CS2 278 aa6.49□□□□□ -1.37
BRD9-219ENST00000523139 PRICKLE1Q96MT3 831 aaPredicted RBP6.49□□□□□ -1.37
BRD9-219ENST00000523139 ZNF599Q96NL3 588 aa6.49□□□□□ -1.37
BRD9-219ENST00000523139 RPRD1AQ96P16 312 aaPredicted RBP6.49□□□□□ -1.37
BRD9-219ENST00000523139 LRRC3BQ96PB8 259 aa6.49□□□□□ -1.37
BRD9-219ENST00000523139 VAT1Q99536 393 aa6.49□□□□□ -1.37
BRD9-219ENST00000523139 FERMT1Q9BQL6 677 aa6.49□□□□□ -1.37
BRD9-219ENST00000523139 SIK2Q9H0K1 926 aa6.49□□□□□ -1.37
BRD9-219ENST00000523139 DTLQ9NZJ0 730 aa6.49□□□□□ -1.37
BRD9-219ENST00000523139 XPO7Q9UIA9 1087 aaKnown RBP6.49□□□□□ -1.37
BRD9-219ENST00000523139 BRWD1Q9NSI6 2320 aa6.49□□□□□ -1.37
BRD9-219ENST00000523139 SYNJ2BP-COX16A0A087WUM0 186 aa6.48□□□□□ -1.37
BRD9-219ENST00000523139 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.48□□□□□ -1.37
BRD9-219ENST00000523139 FAM170AA1A519 330 aa6.48□□□□□ -1.37
BRD9-219ENST00000523139 ARHGAP42A6NI28 874 aa6.48□□□□□ -1.37
BRD9-219ENST00000523139 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.48□□□□□ -1.37
BRD9-219ENST00000523139 HMGB1P1B2RPK0 211 aaPredicted RBP6.48□□□□□ -1.37
BRD9-219ENST00000523139 PI4K2BG5E9Z4 385 aa6.48□□□□□ -1.37
BRD9-219ENST00000523139 DYNC1I1O14576 645 aa6.48□□□□□ -1.37
BRD9-219ENST00000523139 NDC80O14777 642 aa6.48□□□□□ -1.37
BRD9-219ENST00000523139 PPP1R12AO14974 1030 aaPredicted RBP6.48□□□□□ -1.37
BRD9-219ENST00000523139 NPC1O15118 1278 aa6.48□□□□□ -1.37
BRD9-219ENST00000523139 DAPK3O43293 454 aa6.48□□□□□ -1.37
BRD9-219ENST00000523139 CREB3O43889 395 aa6.48□□□□□ -1.37
BRD9-219ENST00000523139 PHF2O75151 1096 aa6.48□□□□□ -1.37
BRD9-219ENST00000523139 MOCS2O96007 188 aaPredicted RBP6.48□□□□□ -1.37
BRD9-219ENST00000523139 TUBBP07437 444 aa6.48□□□□□ -1.37
BRD9-219ENST00000523139 C7P10643 843 aa6.48□□□□□ -1.37
BRD9-219ENST00000523139 CXCR5P32302 372 aa6.48□□□□□ -1.37
BRD9-219ENST00000523139 GBP2P32456 591 aaPredicted RBP6.48□□□□□ -1.37
BRD9-219ENST00000523139 GARSP41250 739 aaKnown RBP6.48□□□□□ -1.37
BRD9-219ENST00000523139 IFNAR2P48551 515 aa6.48□□□□□ -1.37
BRD9-219ENST00000523139 CLCN6P51797 869 aa6.48□□□□□ -1.37
BRD9-219ENST00000523139 DRG2P55039 364 aaKnown RBP6.48□□□□□ -1.37
BRD9-219ENST00000523139 GEMIN4P57678 1058 aaKnown RBP6.48□□□□□ -1.37
BRD9-219ENST00000523139 SULT2A1Q06520 285 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms