RNA–Protein interactions for RNA: ENST00000521387.1

CTNNA1-227, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-227ENST00000521387 NOC3LQ8WTT2 800 aaKnown RBP7.65□□□□□ -1.18
CTNNA1-227ENST00000521387 SCFD1Q8WVM8 642 aa7.65□□□□□ -1.18
CTNNA1-227ENST00000521387 LARP4BQ92615 738 aaKnown RBP7.65□□□□□ -1.18
CTNNA1-227ENST00000521387 ARRDC3Q96B67 414 aa7.65□□□□□ -1.18
CTNNA1-227ENST00000521387 CDK5RAP3Q96JB5 506 aa7.65□□□□□ -1.18
CTNNA1-227ENST00000521387 PKMYT1Q99640 499 aa7.65□□□□□ -1.18
CTNNA1-227ENST00000521387 MDFIQ99750 246 aa7.65□□□□□ -1.18
CTNNA1-227ENST00000521387 EIF2AK1Q9BQI3 630 aaKnown RBP7.65□□□□□ -1.18
CTNNA1-227ENST00000521387 TARS2Q9BW92 718 aaKnown RBP7.65□□□□□ -1.18
CTNNA1-227ENST00000521387 RAB34Q9BZG1 259 aa7.65□□□□□ -1.18
CTNNA1-227ENST00000521387 RPF1Q9H9Y2 349 aaKnown RBP7.65□□□□□ -1.18
CTNNA1-227ENST00000521387 SLC39A2Q9NP94 309 aa7.65□□□□□ -1.18
CTNNA1-227ENST00000521387 CASS4Q9NQ75 786 aa7.65□□□□□ -1.18
CTNNA1-227ENST00000521387 UCKL1Q9NWZ5 548 aa7.65□□□□□ -1.18
CTNNA1-227ENST00000521387 TBC1D14Q9P2M4 693 aa7.65□□□□□ -1.18
CTNNA1-227ENST00000521387 ERRFI1Q9UJM3 462 aaPredicted RBP7.65□□□□□ -1.18
CTNNA1-227ENST00000521387 PCDHA12Q9UN75 941 aa7.65□□□□□ -1.18
CTNNA1-227ENST00000521387 PPP2R2CQ9Y2T4 447 aa7.65□□□□□ -1.18
CTNNA1-227ENST00000521387 RP1P56715 2156 aa7.64□□□□□ -1.19
CTNNA1-227ENST00000521387 DCHS2Q6V1P9 2916 aa7.64□□□□□ -1.19
CTNNA1-227ENST00000521387 TTC26A0AVF1 554 aa7.64□□□□□ -1.19
CTNNA1-227ENST00000521387 ARHGAP10A1A4S6 786 aa7.64□□□□□ -1.19
CTNNA1-227ENST00000521387 TTC24A2A3L6 582 aaPredicted RBP7.64□□□□□ -1.19
CTNNA1-227ENST00000521387 SOWAHDA6NJG2 315 aa7.64□□□□□ -1.19
CTNNA1-227ENST00000521387 LGALS16A8MUM7 142 aa7.64□□□□□ -1.19
CTNNA1-227ENST00000521387 E9PMD0 336 aa7.64□□□□□ -1.19
CTNNA1-227ENST00000521387 TLR4O00206 839 aa7.64□□□□□ -1.19
CTNNA1-227ENST00000521387 PIRO00625 290 aa7.64□□□□□ -1.19
CTNNA1-227ENST00000521387 CCP110O43303 1012 aa7.64□□□□□ -1.19
CTNNA1-227ENST00000521387 ZSCAN12O43309 604 aa7.64□□□□□ -1.19
CTNNA1-227ENST00000521387 HNRNPRO43390 633 aaKnown RBP7.64□□□□□ -1.19
CTNNA1-227ENST00000521387 SLC26A4O43511 780 aa7.64□□□□□ -1.19
CTNNA1-227ENST00000521387 GREM1O60565 184 aa7.64□□□□□ -1.19
CTNNA1-227ENST00000521387 MFAP3LO75121 409 aa7.64□□□□□ -1.19
CTNNA1-227ENST00000521387 VPS4BO75351 444 aa7.64□□□□□ -1.19
CTNNA1-227ENST00000521387 MED24O75448 989 aa7.64□□□□□ -1.19
CTNNA1-227ENST00000521387 GYPCP04921 128 aa7.64□□□□□ -1.19
CTNNA1-227ENST00000521387 GP1BAP07359 652 aa7.64□□□□□ -1.19
CTNNA1-227ENST00000521387 CXCL8P10145 99 aa7.64□□□□□ -1.19
CTNNA1-227ENST00000521387 MCF2P10911 925 aa7.64□□□□□ -1.19
CTNNA1-227ENST00000521387 LIPCP11150 499 aa7.64□□□□□ -1.19
CTNNA1-227ENST00000521387 CYP3A5P20815 502 aa7.64□□□□□ -1.19
CTNNA1-227ENST00000521387 FECHP22830 423 aa7.64□□□□□ -1.19
CTNNA1-227ENST00000521387 CASP14P31944 242 aa7.64□□□□□ -1.19
CTNNA1-227ENST00000521387 ZNF132P52740 706 aa7.64□□□□□ -1.19
CTNNA1-227ENST00000521387 UBXN1Q04323 297 aa7.64□□□□□ -1.19
CTNNA1-227ENST00000521387 EHHADHQ08426 723 aa7.64□□□□□ -1.19
CTNNA1-227ENST00000521387 EIF2S3LQ2VIR3 472 aaKnown RBP7.64□□□□□ -1.19
CTNNA1-227ENST00000521387 MANEAQ5SRI9 462 aa7.64□□□□□ -1.19
CTNNA1-227ENST00000521387 PPP1R26Q5T8A7 1209 aaPredicted RBP7.64□□□□□ -1.19
CTNNA1-227ENST00000521387 DTX1Q86Y01 620 aa7.64□□□□□ -1.19
CTNNA1-227ENST00000521387 ANKRD20A12PQ8NF67 263 aa7.64□□□□□ -1.19
CTNNA1-227ENST00000521387 OR4C6Q8NH72 309 aa7.64□□□□□ -1.19
CTNNA1-227ENST00000521387 KIF18AQ8NI77 898 aa7.64□□□□□ -1.19
CTNNA1-227ENST00000521387 MAPK15Q8TD08 544 aa7.64□□□□□ -1.19
CTNNA1-227ENST00000521387 GRAMD1AQ96CP6 724 aa7.64□□□□□ -1.19
CTNNA1-227ENST00000521387 DNAJC19Q96DA6 116 aa7.64□□□□□ -1.19
CTNNA1-227ENST00000521387 OTUB2Q96DC9 234 aa7.64□□□□□ -1.19
CTNNA1-227ENST00000521387 ABHD17AQ96GS6 310 aa7.64□□□□□ -1.19
CTNNA1-227ENST00000521387 GTPBP4Q9BZE4 634 aaKnown RBP7.64□□□□□ -1.19
CTNNA1-227ENST00000521387 BTBD1Q9H0C5 482 aa7.64□□□□□ -1.19
CTNNA1-227ENST00000521387 LHX5Q9H2C1 402 aa7.64□□□□□ -1.19
CTNNA1-227ENST00000521387 TMEM134Q9H6X4 195 aa7.64□□□□□ -1.19
CTNNA1-227ENST00000521387 FBXO10Q9UK96 956 aa7.64□□□□□ -1.19
CTNNA1-227ENST00000521387 VPS4AQ9UN37 437 aa7.64□□□□□ -1.19
CTNNA1-227ENST00000521387 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.64□□□□□ -1.193e-6■■□□□ 14
CTNNA1-227ENST00000521387 SCN1AP35498 2009 aa7.64□□□□□ -1.19
CTNNA1-227ENST00000521387 PRRC2CQ9Y520 2896 aaKnown RBP7.64□□□□□ -1.19
CTNNA1-227ENST00000521387 RTTNQ86VV8 2226 aa7.63□□□□□ -1.19
CTNNA1-227ENST00000521387 NPHP3-ACAD11A0A0J9YXS1 232 aa7.63□□□□□ -1.19
CTNNA1-227ENST00000521387 A0A0U1RQJ8 604 aa7.63□□□□□ -1.19
CTNNA1-227ENST00000521387 BICDL2A1A5D9 508 aa7.63□□□□□ -1.19
CTNNA1-227ENST00000521387 FANCGO15287 622 aa7.63□□□□□ -1.19
CTNNA1-227ENST00000521387 TUBB4AP04350 444 aa7.63□□□□□ -1.19
CTNNA1-227ENST00000521387 PLA2G4BP0C869 781 aa7.63□□□□□ -1.19
CTNNA1-227ENST00000521387 HARSP12081 509 aaKnown RBP7.63□□□□□ -1.19
CTNNA1-227ENST00000521387 TYRP14679 529 aa7.63□□□□□ -1.19
CTNNA1-227ENST00000521387 IDEP14735 1019 aa7.63□□□□□ -1.19
CTNNA1-227ENST00000521387 NR1D1P20393 614 aa7.63□□□□□ -1.19
CTNNA1-227ENST00000521387 EEF1GP26641 437 aaKnown RBP7.63□□□□□ -1.19
CTNNA1-227ENST00000521387 GMPRP36959 345 aa7.63□□□□□ -1.19
CTNNA1-227ENST00000521387 PPP1R2P41236 205 aa7.63□□□□□ -1.19
CTNNA1-227ENST00000521387 PDE6CP51160 858 aa7.63□□□□□ -1.19
CTNNA1-227ENST00000521387 ETF1P62495 437 aaKnown RBP7.63□□□□□ -1.19
CTNNA1-227ENST00000521387 KLRB1Q12918 225 aa7.63□□□□□ -1.19
CTNNA1-227ENST00000521387 SYCP1Q15431 976 aa7.63□□□□□ -1.19
CTNNA1-227ENST00000521387 GEN1Q17RS7 908 aa7.63□□□□□ -1.19
CTNNA1-227ENST00000521387 TIPARPQ7Z3E1 657 aaKnown RBP7.63□□□□□ -1.19
CTNNA1-227ENST00000521387 ZFAND4Q86XD8 727 aa7.63□□□□□ -1.19
CTNNA1-227ENST00000521387 XYLT1Q86Y38 959 aa7.63□□□□□ -1.19
CTNNA1-227ENST00000521387 MCEMP1Q8IX19 187 aa7.63□□□□□ -1.19
CTNNA1-227ENST00000521387 DCP1BQ8IZD4 617 aaKnown RBP7.63□□□□□ -1.19
CTNNA1-227ENST00000521387 CSGALNACT2Q8N6G5 542 aa7.63□□□□□ -1.19
CTNNA1-227ENST00000521387 OR2T3Q8NH03 318 aa7.63□□□□□ -1.19
CTNNA1-227ENST00000521387 APOLD1Q96LR9 279 aa7.63□□□□□ -1.19
CTNNA1-227ENST00000521387 SPSB2Q99619 263 aa7.63□□□□□ -1.19
CTNNA1-227ENST00000521387 TUBGCP2Q9BSJ2 902 aa7.63□□□□□ -1.19
CTNNA1-227ENST00000521387 DESI2Q9BSY9 194 aa7.63□□□□□ -1.19
CTNNA1-227ENST00000521387 LRRC27Q9C0I9 530 aa7.63□□□□□ -1.19
CTNNA1-227ENST00000521387 HAPLN2Q9GZV7 340 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms