RNA–Protein interactions for RNA: ENST00000520953.5

SREK1-209, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 5

Gene SREK1, Length 2,172 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-209ENST00000520953 ZSCAN5DPP0CG00 497 aa15.49■□□□□ 0.07
SREK1-209ENST00000520953 HCAR3P49019 387 aa15.49■□□□□ 0.07
SREK1-209ENST00000520953 BYSLQ13895 437 aaKnown RBP15.49■□□□□ 0.07
SREK1-209ENST00000520953 CTC1Q2NKJ3 1217 aa15.49■□□□□ 0.07
SREK1-209ENST00000520953 ARHGAP15Q53QZ3 475 aa15.49■□□□□ 0.07
SREK1-209ENST00000520953 ARHGAP36Q6ZRI8 547 aa15.49■□□□□ 0.07
SREK1-209ENST00000520953 NLRP14Q86W24 1093 aa15.49■□□□□ 0.07
SREK1-209ENST00000520953 ARID3BQ8IVW6 561 aaPredicted RBP15.49■□□□□ 0.07
SREK1-209ENST00000520953 NPAS3Q8IXF0 933 aa15.49■□□□□ 0.07
SREK1-209ENST00000520953 CCDC105Q8IYK2 499 aa15.49■□□□□ 0.07
SREK1-209ENST00000520953 LEMD2Q8NC56 503 aa15.49■□□□□ 0.07
SREK1-209ENST00000520953 CCDC114Q96M63 670 aa15.49■□□□□ 0.07
SREK1-209ENST00000520953 LGMNQ99538 433 aa15.49■□□□□ 0.07
SREK1-209ENST00000520953 S1PR5Q9H228 398 aa15.49■□□□□ 0.07
SREK1-209ENST00000520953 ARHGAP26Q9UNA1 814 aa15.49■□□□□ 0.07
SREK1-209ENST00000520953 ZFP37Q9Y6Q3 630 aaPredicted RBP15.49■□□□□ 0.07
SREK1-209ENST00000520953 COL6A3P12111 3177 aa15.49■□□□□ 0.07
SREK1-209ENST00000520953 IGLV3-10A0A075B6K4 115 aa15.48■□□□□ 0.07
SREK1-209ENST00000520953 FGF19O95750 216 aa15.48■□□□□ 0.07
SREK1-209ENST00000520953 RBP3P10745 1247 aa15.48■□□□□ 0.07
SREK1-209ENST00000520953 TGM2P21980 687 aa15.48■□□□□ 0.07
SREK1-209ENST00000520953 FSHRP23945 695 aa15.48■□□□□ 0.07
SREK1-209ENST00000520953 CHRNA3P32297 505 aa15.48■□□□□ 0.07
SREK1-209ENST00000520953 VIPR2P41587 438 aa15.48■□□□□ 0.07
SREK1-209ENST00000520953 SLC11A2P49281 568 aa15.48■□□□□ 0.07
SREK1-209ENST00000520953 DR1Q01658 176 aa15.48■□□□□ 0.07
SREK1-209ENST00000520953 NRG1Q02297 640 aaPredicted RBP15.48■□□□□ 0.07
SREK1-209ENST00000520953 PAFAH1B3Q15102 231 aaKnown RBP15.48■□□□□ 0.07
SREK1-209ENST00000520953 ZSCAN18Q8TBC5 510 aaPredicted RBP15.48■□□□□ 0.07
SREK1-209ENST00000520953 MAIP1Q8WWC4 291 aa15.48■□□□□ 0.07
SREK1-209ENST00000520953 FGF13Q92913 245 aa15.48■□□□□ 0.07
SREK1-209ENST00000520953 OLFM3Q96PB7 478 aa15.48■□□□□ 0.07
SREK1-209ENST00000520953 ADAM7Q9H2U9 754 aa15.48■□□□□ 0.07
SREK1-209ENST00000520953 ACBD3Q9H3P7 528 aa15.48■□□□□ 0.07
SREK1-209ENST00000520953 NOL6Q9H6R4 1146 aaKnown RBP15.48■□□□□ 0.07
SREK1-209ENST00000520953 ZNF212Q9UDV6 495 aa15.48■□□□□ 0.07
SREK1-209ENST00000520953 GYS2P54840 703 aa15.48■□□□□ 0.07
SREK1-209ENST00000520953 ADGRF1Q5T601 910 aa15.48■□□□□ 0.07
SREK1-209ENST00000520953 JAMLQ86YT9 394 aa15.48■□□□□ 0.07
SREK1-209ENST00000520953 OR52K2Q8NGK3 314 aa15.48■□□□□ 0.07
SREK1-209ENST00000520953 NKD2Q969F2 451 aaPredicted RBP15.48■□□□□ 0.07
SREK1-209ENST00000520953 TRIM31Q9BZY9 425 aa15.48■□□□□ 0.07
SREK1-209ENST00000520953 EPB41L5Q9HCM4 733 aa15.48■□□□□ 0.07
SREK1-209ENST00000520953 TDP1Q9NUW8 608 aa15.48■□□□□ 0.07
SREK1-209ENST00000520953 PCYOX1Q9UHG3 505 aa15.48■□□□□ 0.07
SREK1-209ENST00000520953 ZNF148Q9UQR1 794 aa15.48■□□□□ 0.07
SREK1-209ENST00000520953 MYOFQ9NZM1 2061 aa15.47■□□□□ 0.07
SREK1-209ENST00000520953 DOCK8Q8NF50 2099 aa15.47■□□□□ 0.07
SREK1-209ENST00000520953 DRGXA6NNA5 263 aa15.47■□□□□ 0.07
SREK1-209ENST00000520953 F5H5T6 163 aa15.47■□□□□ 0.07
SREK1-209ENST00000520953 H7C0C1 242 aa15.47■□□□□ 0.07
SREK1-209ENST00000520953 ZNF197O14709 1029 aa15.47■□□□□ 0.07
SREK1-209ENST00000520953 VAV1P15498 845 aa15.47■□□□□ 0.07
SREK1-209ENST00000520953 ATP5OP48047 213 aa15.47■□□□□ 0.07
SREK1-209ENST00000520953 VPS41P49754 854 aa15.47■□□□□ 0.07
SREK1-209ENST00000520953 GUCY2DQ02846 1103 aa15.47■□□□□ 0.07
SREK1-209ENST00000520953 CCDC85BQ15834 202 aaPredicted RBP15.47■□□□□ 0.07
SREK1-209ENST00000520953 FAM78AQ5JUQ0 283 aa15.47■□□□□ 0.07
SREK1-209ENST00000520953 DDX42Q86XP3 938 aaKnown RBP eCLIP15.47■□□□□ 0.07
SREK1-209ENST00000520953 ARHGAP12Q8IWW6 846 aa15.47■□□□□ 0.07
SREK1-209ENST00000520953 IFT20Q8IY31 132 aa15.47■□□□□ 0.07
SREK1-209ENST00000520953 RTL3Q8N8U3 475 aaKnown RBP15.47■□□□□ 0.07
SREK1-209ENST00000520953 ZYG11BQ9C0D3 744 aa15.47■□□□□ 0.07
SREK1-209ENST00000520953 LMCD1Q9NZU5 365 aa15.47■□□□□ 0.07
SREK1-209ENST00000520953 SH3BP1Q9Y3L3 701 aa15.47■□□□□ 0.07
SREK1-209ENST00000520953 CLUHO75153 1309 aa15.47■□□□□ 0.07
SREK1-209ENST00000520953 NYNRINQ9P2P1 1898 aaKnown RBP15.47■□□□□ 0.07
SREK1-209ENST00000520953 MCF2LO15068 1137 aa15.46■□□□□ 0.07
SREK1-209ENST00000520953 DDX6P26196 483 aaKnown RBP eCLIP15.46■□□□□ 0.07
SREK1-209ENST00000520953 RBL1P28749 1068 aa15.46■□□□□ 0.07
SREK1-209ENST00000520953 FNTAP49354 379 aa15.46■□□□□ 0.07
SREK1-209ENST00000520953 CARSP49589 748 aaKnown RBP15.46■□□□□ 0.07
SREK1-209ENST00000520953 LRRC31Q6UY01 552 aa15.46■□□□□ 0.07
SREK1-209ENST00000520953 TAB3Q8N5C8 712 aaPredicted RBP15.46■□□□□ 0.07
SREK1-209ENST00000520953 FAM71DQ8N9W8 422 aa15.46■□□□□ 0.07
SREK1-209ENST00000520953 CEP41Q9BYV8 373 aa15.46■□□□□ 0.07
SREK1-209ENST00000520953 SLC39A8Q9C0K1 460 aa15.46■□□□□ 0.07
SREK1-209ENST00000520953 LINC00597Q9H2U6 94 aa15.46■□□□□ 0.07
SREK1-209ENST00000520953 STOML2Q9UJZ1 356 aa15.46■□□□□ 0.07
SREK1-209ENST00000520953 NEU2Q9Y3R4 380 aa15.46■□□□□ 0.07
SREK1-209ENST00000520953 SHROOM3Q8TF72 1996 aa15.46■□□□□ 0.07
SREK1-209ENST00000520953 TMEM265A0A087WTH1 108 aa15.46■□□□□ 0.07
SREK1-209ENST00000520953 H3BQ06 376 aaPredicted RBP15.46■□□□□ 0.07
SREK1-209ENST00000520953 SYF2O95926 243 aaKnown RBP15.46■□□□□ 0.07
SREK1-209ENST00000520953 SP100P23497 879 aaPredicted RBP15.46■□□□□ 0.07
SREK1-209ENST00000520953 FAM193AP78312 1265 aa15.46■□□□□ 0.07
SREK1-209ENST00000520953 ZNF77Q15935 545 aa15.46■□□□□ 0.07
SREK1-209ENST00000520953 PRPF38BQ5VTL8 546 aaKnown RBP15.46■□□□□ 0.07
SREK1-209ENST00000520953 EMBQ6PCB8 327 aa15.46■□□□□ 0.07
SREK1-209ENST00000520953 DARS2Q6PI48 645 aaKnown RBP15.46■□□□□ 0.07
SREK1-209ENST00000520953 TPGS1Q6ZTW0 290 aa15.46■□□□□ 0.07
SREK1-209ENST00000520953 HTR3DQ70Z44 454 aa15.46■□□□□ 0.07
SREK1-209ENST00000520953 TTC13Q8NBP0 860 aa15.46■□□□□ 0.07
SREK1-209ENST00000520953 CASKIN2Q8WXE0 1202 aa15.46■□□□□ 0.07
SREK1-209ENST00000520953 MYLIPQ8WY64 445 aa15.46■□□□□ 0.07
SREK1-209ENST00000520953 CAVIN3Q969G5 261 aa15.46■□□□□ 0.07
SREK1-209ENST00000520953 AZIN2Q96A70 460 aa15.46■□□□□ 0.07
SREK1-209ENST00000520953 DPH5Q9H2P9 285 aa15.46■□□□□ 0.07
SREK1-209ENST00000520953 MED4Q9NPJ6 270 aa15.46■□□□□ 0.07
SREK1-209ENST00000520953 PLK2Q9NYY3 685 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms