RNA–Protein interactions for RNA: ENST00000520889.1

IGHV4-55-201, Transcript of immunoglobulin heavy variable 4-55 (pseudogene), humanhuman

BASIC

Gene IGHV4-55, Length 368 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-55-201ENST00000520889 BZW1Q7L1Q6 419 aaKnown RBP6.55□□□□□ -1.36
IGHV4-55-201ENST00000520889 C14orf80Q86SX3 495 aa6.55□□□□□ -1.36
IGHV4-55-201ENST00000520889 METTL3Q86U44 580 aaKnown RBP6.55□□□□□ -1.36
IGHV4-55-201ENST00000520889 AHI1Q8N157 1196 aa6.55□□□□□ -1.36
IGHV4-55-201ENST00000520889 PHTF2Q8N3S3 785 aa6.55□□□□□ -1.36
IGHV4-55-201ENST00000520889 KCTD6Q8NC69 237 aa6.55□□□□□ -1.36
IGHV4-55-201ENST00000520889 IGSF8Q969P0 613 aa6.55□□□□□ -1.36
IGHV4-55-201ENST00000520889 TTC17Q96AE7 1141 aa6.55□□□□□ -1.36
IGHV4-55-201ENST00000520889 ACDQ96AP0 544 aa6.55□□□□□ -1.36
IGHV4-55-201ENST00000520889 ZFYVE19Q96K21 471 aa6.55□□□□□ -1.36
IGHV4-55-201ENST00000520889 LMLNQ96KR4 655 aa6.55□□□□□ -1.36
IGHV4-55-201ENST00000520889 KCTD15Q96SI1 283 aaPredicted RBP6.55□□□□□ -1.36
IGHV4-55-201ENST00000520889 P2RY13Q9BPV8 354 aa6.55□□□□□ -1.36
IGHV4-55-201ENST00000520889 SIK2Q9H0K1 926 aa6.55□□□□□ -1.36
IGHV4-55-201ENST00000520889 MAGEH1Q9H213 219 aa6.55□□□□□ -1.36
IGHV4-55-201ENST00000520889 PCDH18Q9HCL0 1135 aa6.55□□□□□ -1.36
IGHV4-55-201ENST00000520889 CD320Q9NPF0 282 aa6.55□□□□□ -1.36
IGHV4-55-201ENST00000520889 ARHGEF3Q9NR81 526 aa6.55□□□□□ -1.36
IGHV4-55-201ENST00000520889 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.55□□□□□ -1.36
IGHV4-55-201ENST00000520889 GTSE1Q9NYZ3 720 aa6.55□□□□□ -1.36
IGHV4-55-201ENST00000520889 CWC15Q9P013 229 aaKnown RBP6.55□□□□□ -1.36
IGHV4-55-201ENST00000520889 DEC1Q9P2X7 70 aa6.55□□□□□ -1.36
IGHV4-55-201ENST00000520889 TRIM10Q9UDY6 481 aa6.55□□□□□ -1.36
IGHV4-55-201ENST00000520889 PYCARDQ9ULZ3 195 aa6.55□□□□□ -1.36
IGHV4-55-201ENST00000520889 PIAS3Q9Y6X2 628 aa6.55□□□□□ -1.36
IGHV4-55-201ENST00000520889 CKAP5Q14008 2032 aa6.54□□□□□ -1.36
IGHV4-55-201ENST00000520889 NYNRINQ9P2P1 1898 aaKnown RBP6.54□□□□□ -1.36
IGHV4-55-201ENST00000520889 A0A0U1RQJ8 604 aa6.54□□□□□ -1.36
IGHV4-55-201ENST00000520889 KANSL1LA0AUZ9 987 aa6.54□□□□□ -1.36
IGHV4-55-201ENST00000520889 LRRD1A4D1F6 860 aa6.54□□□□□ -1.36
IGHV4-55-201ENST00000520889 ZSCAN5CA6NGD5 496 aaPredicted RBP6.54□□□□□ -1.36
IGHV4-55-201ENST00000520889 OTOL1A6NHN0 477 aaPredicted RBP6.54□□□□□ -1.36
IGHV4-55-201ENST00000520889 C3orf70A6NLC5 250 aaPredicted RBP6.54□□□□□ -1.36
IGHV4-55-201ENST00000520889 TMEM110-MUSTN1A8MSY1 372 aa6.54□□□□□ -1.36
IGHV4-55-201ENST00000520889 FAM72CH0Y354 149 aa6.54□□□□□ -1.36
IGHV4-55-201ENST00000520889 H0Y626 953 aa6.54□□□□□ -1.36
IGHV4-55-201ENST00000520889 KIF2AO00139 706 aaPredicted RBP6.54□□□□□ -1.36
IGHV4-55-201ENST00000520889 DCLK1O15075 740 aa6.54□□□□□ -1.36
IGHV4-55-201ENST00000520889 DDX3YO15523 660 aaKnown RBP6.54□□□□□ -1.36
IGHV4-55-201ENST00000520889 NARSO43776 548 aaKnown RBP6.54□□□□□ -1.36
IGHV4-55-201ENST00000520889 SRGAP2O75044 1071 aa6.54□□□□□ -1.36
IGHV4-55-201ENST00000520889 KAT7O95251 611 aa6.54□□□□□ -1.36
IGHV4-55-201ENST00000520889 APODP05090 189 aa6.54□□□□□ -1.36
IGHV4-55-201ENST00000520889 SRPRAP08240 638 aaKnown RBP6.54□□□□□ -1.36
IGHV4-55-201ENST00000520889 C7P10643 843 aa6.54□□□□□ -1.36
IGHV4-55-201ENST00000520889 HNRNPLP14866 589 aaKnown RBP eCLIP6.54□□□□□ -1.36
IGHV4-55-201ENST00000520889 TCF4P15884 667 aa6.54□□□□□ -1.36
IGHV4-55-201ENST00000520889 GOT1P17174 413 aa6.54□□□□□ -1.36
IGHV4-55-201ENST00000520889 ERCC2P18074 760 aa6.54□□□□□ -1.36
IGHV4-55-201ENST00000520889 EPHB2P29323 1055 aa6.54□□□□□ -1.36
IGHV4-55-201ENST00000520889 HLA-FP30511 346 aa6.54□□□□□ -1.36
IGHV4-55-201ENST00000520889 OR1E1P30953 314 aa6.54□□□□□ -1.36
IGHV4-55-201ENST00000520889 CDKN2BP42772 138 aa6.54□□□□□ -1.36
IGHV4-55-201ENST00000520889 SSR1P43307 286 aaKnown RBP6.54□□□□□ -1.36
IGHV4-55-201ENST00000520889 RPS9P46781 194 aaKnown RBP6.54□□□□□ -1.36
IGHV4-55-201ENST00000520889 NR2C2P49116 596 aa6.54□□□□□ -1.36
IGHV4-55-201ENST00000520889 GALK1P51570 392 aa6.54□□□□□ -1.36
IGHV4-55-201ENST00000520889 GEMIN4P57678 1058 aaKnown RBP6.54□□□□□ -1.36
IGHV4-55-201ENST00000520889 RPS24P62847 133 aaKnown RBP6.54□□□□□ -1.36
IGHV4-55-201ENST00000520889 TNK2Q07912 1038 aa6.54□□□□□ -1.36
IGHV4-55-201ENST00000520889 SLC20A2Q08357 652 aa6.54□□□□□ -1.36
IGHV4-55-201ENST00000520889 GRSF1Q12849 480 aaKnown RBP eCLIP6.54□□□□□ -1.36
IGHV4-55-201ENST00000520889 CDH18Q13634 790 aa6.54□□□□□ -1.36
IGHV4-55-201ENST00000520889 LRRC32Q14392 662 aa6.54□□□□□ -1.36
IGHV4-55-201ENST00000520889 PAFAH1B3Q15102 231 aaKnown RBP6.54□□□□□ -1.36
IGHV4-55-201ENST00000520889 RPS6KA1Q15418 735 aa6.54□□□□□ -1.36
IGHV4-55-201ENST00000520889 CA9Q16790 459 aa6.54□□□□□ -1.36
IGHV4-55-201ENST00000520889 SMTNL2Q2TAL5 461 aa6.54□□□□□ -1.36
IGHV4-55-201ENST00000520889 PARP15Q460N3 678 aa6.54□□□□□ -1.36
IGHV4-55-201ENST00000520889 ANKRD20A8PQ5CZ79 823 aa6.54□□□□□ -1.36
IGHV4-55-201ENST00000520889 TFDP3Q5H9I0 405 aa6.54□□□□□ -1.36
IGHV4-55-201ENST00000520889 PPP6R3Q5H9R7 873 aaPredicted RBP6.54□□□□□ -1.36
IGHV4-55-201ENST00000520889 TMEM196Q5HYL7 178 aa6.54□□□□□ -1.36
IGHV4-55-201ENST00000520889 KCNT1Q5JUK3 1230 aa6.54□□□□□ -1.36
IGHV4-55-201ENST00000520889 FAM72AQ5TYM5 149 aa6.54□□□□□ -1.36
IGHV4-55-201ENST00000520889 AFMIDQ63HM1 303 aa6.54□□□□□ -1.36
IGHV4-55-201ENST00000520889 SLC9A4Q6AI14 798 aa6.54□□□□□ -1.36
IGHV4-55-201ENST00000520889 TXNRD3NBQ6F5E7 133 aa6.54□□□□□ -1.36
IGHV4-55-201ENST00000520889 FAM72DQ6L9T8 149 aa6.54□□□□□ -1.36
IGHV4-55-201ENST00000520889 CXorf57Q6NSI4 855 aaKnown RBP6.54□□□□□ -1.36
IGHV4-55-201ENST00000520889 RFWD3Q6PCD5 774 aa6.54□□□□□ -1.36
IGHV4-55-201ENST00000520889 TMCO3Q6UWJ1 677 aa6.54□□□□□ -1.36
IGHV4-55-201ENST00000520889 TPGS1Q6ZTW0 290 aa6.54□□□□□ -1.36
IGHV4-55-201ENST00000520889 BMP8AQ7Z5Y6 402 aa6.54□□□□□ -1.36
IGHV4-55-201ENST00000520889 ANKS1BQ7Z6G8 1248 aa6.54□□□□□ -1.36
IGHV4-55-201ENST00000520889 FAM72BQ86X60 149 aa6.54□□□□□ -1.36
IGHV4-55-201ENST00000520889 MFN1Q8IWA4 741 aa6.54□□□□□ -1.36
IGHV4-55-201ENST00000520889 PYROXD2Q8N2H3 581 aa6.54□□□□□ -1.36
IGHV4-55-201ENST00000520889 TERB1Q8NA31 727 aa6.54□□□□□ -1.36
IGHV4-55-201ENST00000520889 UCMAQ8WVF2 138 aa6.54□□□□□ -1.36
IGHV4-55-201ENST00000520889 CASKIN2Q8WXE0 1202 aa6.54□□□□□ -1.36
IGHV4-55-201ENST00000520889 ATRIPQ8WXE1 791 aa6.54□□□□□ -1.36
IGHV4-55-201ENST00000520889 FAM3CQ92520 227 aa6.54□□□□□ -1.36
IGHV4-55-201ENST00000520889 HSPH1Q92598 858 aa6.54□□□□□ -1.36
IGHV4-55-201ENST00000520889 FATE1Q969F0 183 aa6.54□□□□□ -1.36
IGHV4-55-201ENST00000520889 CHFRQ96EP1 664 aa6.54□□□□□ -1.36
IGHV4-55-201ENST00000520889 CSPG4P5Q96PW8 444 aa6.54□□□□□ -1.36
IGHV4-55-201ENST00000520889 RNF157Q96PX1 679 aa6.54□□□□□ -1.36
IGHV4-55-201ENST00000520889 MAK16Q9BXY0 300 aaKnown RBP6.54□□□□□ -1.36
IGHV4-55-201ENST00000520889 BRD8Q9H0E9 1235 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms