RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 FGBP02675 491 aa4.53□□□□□ -1.68
SQLE-204ENST00000520493 IFIT1P09914 478 aaKnown RBP4.53□□□□□ -1.68
SQLE-204ENST00000520493 APEHP13798 732 aaKnown RBP4.53□□□□□ -1.68
SQLE-204ENST00000520493 MMP8P22894 467 aa4.53□□□□□ -1.68
SQLE-204ENST00000520493 CNTFP26441 200 aa4.53□□□□□ -1.68
SQLE-204ENST00000520493 TSPAN7P41732 249 aa4.53□□□□□ -1.68
SQLE-204ENST00000520493 CCR5P51681 352 aa4.53□□□□□ -1.68
SQLE-204ENST00000520493 TXNL4AP83876 142 aaKnown RBP4.53□□□□□ -1.68
SQLE-204ENST00000520493 POU5F1Q01860 360 aaKnown RBP4.53□□□□□ -1.68
SQLE-204ENST00000520493 MTAPQ13126 283 aa4.53□□□□□ -1.68
SQLE-204ENST00000520493 PRKG2Q13237 762 aa4.53□□□□□ -1.68
SQLE-204ENST00000520493 RPS6KA2Q15349 733 aa4.53□□□□□ -1.68
SQLE-204ENST00000520493 Q4G0T1 1027 aa4.53□□□□□ -1.68
SQLE-204ENST00000520493 CTXN3Q4LDR2 81 aa4.53□□□□□ -1.68
SQLE-204ENST00000520493 ZNF569Q5MCW4 686 aa4.53□□□□□ -1.68
SQLE-204ENST00000520493 MEX3CQ5U5Q3 659 aaKnown RBP4.53□□□□□ -1.68
SQLE-204ENST00000520493 DGAT2L7PQ6IED9 249 aa4.53□□□□□ -1.68
SQLE-204ENST00000520493 MSANTD2Q6P1R3 559 aa4.53□□□□□ -1.68
SQLE-204ENST00000520493 SHC4Q6S5L8 630 aa4.53□□□□□ -1.68
SQLE-204ENST00000520493 CLEC9AQ6UXN8 241 aa4.53□□□□□ -1.68
SQLE-204ENST00000520493 RILPL2Q969X0 211 aa4.53□□□□□ -1.68
SQLE-204ENST00000520493 ZBTB9Q96C00 473 aa4.53□□□□□ -1.68
SQLE-204ENST00000520493 COG8Q96MW5 612 aa4.53□□□□□ -1.68
SQLE-204ENST00000520493 SPRTNQ9H040 489 aaPredicted RBP4.53□□□□□ -1.68
SQLE-204ENST00000520493 KCNK9Q9NPC2 374 aa4.53□□□□□ -1.68
SQLE-204ENST00000520493 SMC4Q9NTJ3 1288 aa4.53□□□□□ -1.68
SQLE-204ENST00000520493 ZBTB1Q9Y2K1 713 aa4.53□□□□□ -1.68
SQLE-204ENST00000520493 UBE2J1Q9Y385 318 aaPredicted RBP4.53□□□□□ -1.68
SQLE-204ENST00000520493 A6NLC8 198 aa4.52□□□□□ -1.69
SQLE-204ENST00000520493 AGPSO00116 658 aa4.52□□□□□ -1.69
SQLE-204ENST00000520493 SOCS2O14508 198 aa4.52□□□□□ -1.69
SQLE-204ENST00000520493 HNRNPRO43390 633 aaKnown RBP4.52□□□□□ -1.69
SQLE-204ENST00000520493 FIBPO43427 364 aa4.52□□□□□ -1.69
SQLE-204ENST00000520493 PPP6R2O75170 966 aa4.52□□□□□ -1.69
SQLE-204ENST00000520493 RPP40O75818 363 aaKnown RBP4.52□□□□□ -1.69
SQLE-204ENST00000520493 TMEM225BP0DP42 221 aa4.52□□□□□ -1.69
SQLE-204ENST00000520493 ADRA1DP25100 572 aa4.52□□□□□ -1.69
SQLE-204ENST00000520493 NTSR1P30989 418 aa4.52□□□□□ -1.69
SQLE-204ENST00000520493 AKT1P31749 480 aa4.52□□□□□ -1.69
SQLE-204ENST00000520493 GSTM5P46439 218 aa4.52□□□□□ -1.69
SQLE-204ENST00000520493 POLGP54098 1239 aaPredicted RBP4.52□□□□□ -1.69
SQLE-204ENST00000520493 EIF4A1P60842 406 aaKnown RBP4.52□□□□□ -1.69
SQLE-204ENST00000520493 CFHR3Q02985 330 aa4.52□□□□□ -1.69
SQLE-204ENST00000520493 SLC12A1Q13621 1099 aa4.52□□□□□ -1.69
SQLE-204ENST00000520493 BTBD16Q32M84 506 aa4.52□□□□□ -1.69
SQLE-204ENST00000520493 SPATA1Q5VX52 437 aa4.52□□□□□ -1.69
SQLE-204ENST00000520493 FAM90A2PQ658T7 463 aa4.52□□□□□ -1.69
SQLE-204ENST00000520493 RANBP10Q6VN20 620 aa4.52□□□□□ -1.69
SQLE-204ENST00000520493 PIK3AP1Q6ZUJ8 805 aa4.52□□□□□ -1.69
SQLE-204ENST00000520493 LINC01465Q8N7H1 131 aa4.52□□□□□ -1.69
SQLE-204ENST00000520493 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.52□□□□□ -1.69
SQLE-204ENST00000520493 PNPLA1Q8N8W4 532 aa4.52□□□□□ -1.69
SQLE-204ENST00000520493 ZNF398Q8TD17 642 aa4.52□□□□□ -1.69
SQLE-204ENST00000520493 SLC2A12Q8TD20 617 aa4.52□□□□□ -1.69
SQLE-204ENST00000520493 HMGB4Q8WW32 186 aa4.52□□□□□ -1.69
SQLE-204ENST00000520493 RFFLQ8WZ73 363 aa4.52□□□□□ -1.69
SQLE-204ENST00000520493 HTRA1Q92743 480 aa4.52□□□□□ -1.69
SQLE-204ENST00000520493 GOLGA1Q92805 767 aa4.52□□□□□ -1.69
SQLE-204ENST00000520493 CTHRC1Q96CG8 243 aa4.52□□□□□ -1.69
SQLE-204ENST00000520493 HIC2Q96JB3 615 aa4.52□□□□□ -1.69
SQLE-204ENST00000520493 SERINC2Q96SA4 455 aa4.52□□□□□ -1.69
SQLE-204ENST00000520493 NPAS1Q99742 590 aa4.52□□□□□ -1.69
SQLE-204ENST00000520493 REEP2Q9BRK0 252 aa4.52□□□□□ -1.69
SQLE-204ENST00000520493 PREBQ9HCU5 417 aa4.52□□□□□ -1.69
SQLE-204ENST00000520493 BLOC1S4Q9NUP1 217 aa4.52□□□□□ -1.69
SQLE-204ENST00000520493 GAR1Q9NY12 217 aaKnown RBP4.52□□□□□ -1.69
SQLE-204ENST00000520493 BAG5Q9UL15 447 aa4.52□□□□□ -1.69
SQLE-204ENST00000520493 RRP7AQ9Y3A4 280 aaKnown RBP4.52□□□□□ -1.69
SQLE-204ENST00000520493 FER1L4A9Z1Z3 1794 aa4.52□□□□□ -1.69
SQLE-204ENST00000520493 LOC105369274A0A096LPK9 316 aa4.51□□□□□ -1.69
SQLE-204ENST00000520493 LOC102723532A0A0G2JNH3 316 aa4.51□□□□□ -1.69
SQLE-204ENST00000520493 MYMKA6NI61 221 aa4.51□□□□□ -1.69
SQLE-204ENST00000520493 FAM90A20PA6NIJ5 464 aa4.51□□□□□ -1.69
SQLE-204ENST00000520493 H3BNC9 293 aa4.51□□□□□ -1.69
SQLE-204ENST00000520493 TMEM63AO94886 807 aa4.51□□□□□ -1.69
SQLE-204ENST00000520493 CER1O95813 267 aa4.51□□□□□ -1.69
SQLE-204ENST00000520493 TMEM191BP0C7N4 346 aa4.51□□□□□ -1.69
SQLE-204ENST00000520493 TNNT1P13805 278 aa4.51□□□□□ -1.69
SQLE-204ENST00000520493 NR4A2P43354 598 aa4.51□□□□□ -1.69
SQLE-204ENST00000520493 SF3A3Q12874 501 aaKnown RBP eCLIP4.51□□□□□ -1.692e-7■■■■■ 43
SQLE-204ENST00000520493 SEMA3BQ13214 749 aa4.51□□□□□ -1.69
SQLE-204ENST00000520493 DCTN1Q14203 1278 aa4.51□□□□□ -1.69
SQLE-204ENST00000520493 MFSD13AQ14CX5 517 aa4.51□□□□□ -1.69
SQLE-204ENST00000520493 TMEM196Q5HYL7 178 aa4.51□□□□□ -1.69
SQLE-204ENST00000520493 CCDC144NLQ6NUI1 221 aa4.51□□□□□ -1.69
SQLE-204ENST00000520493 C16orf54Q6UWD8 224 aa4.51□□□□□ -1.69
SQLE-204ENST00000520493 OR4N4Q8N0Y3 316 aa4.51□□□□□ -1.69
SQLE-204ENST00000520493 C12orf76Q8N812 135 aaPredicted RBP4.51□□□□□ -1.69
SQLE-204ENST00000520493 C11orf44Q8N8P7 122 aa4.51□□□□□ -1.69
SQLE-204ENST00000520493 FAM71DQ8N9W8 422 aa4.51□□□□□ -1.69
SQLE-204ENST00000520493 CEP70Q8NHQ1 597 aa4.51□□□□□ -1.69
SQLE-204ENST00000520493 C16orf52Q8NHV5 167 aa4.51□□□□□ -1.69
SQLE-204ENST00000520493 CSGALNACT1Q8TDX6 532 aa4.51□□□□□ -1.69
SQLE-204ENST00000520493 HVCN1Q96D96 273 aa4.51□□□□□ -1.69
SQLE-204ENST00000520493 KTI12Q96EK9 354 aaPredicted RBP4.51□□□□□ -1.69
SQLE-204ENST00000520493 WDYHV1Q96HA8 205 aa4.51□□□□□ -1.69
SQLE-204ENST00000520493 FAR2Q96K12 515 aa4.51□□□□□ -1.69
SQLE-204ENST00000520493 CINPQ9BW66 212 aaPredicted RBP4.51□□□□□ -1.69
SQLE-204ENST00000520493 ABHD16BQ9H3Z7 469 aa4.51□□□□□ -1.69
SQLE-204ENST00000520493 CHODLQ9H9P2 273 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms