RNA–Protein interactions for RNA: ENST00000520233.1

SDC2-205, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-205ENST00000520233 ZNF212Q9UDV6 495 aa18.32■□□□□ 0.52
SDC2-205ENST00000520233 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.31■□□□□ 0.52
SDC2-205ENST00000520233 OTOL1A6NHN0 477 aaPredicted RBP18.31■□□□□ 0.52
SDC2-205ENST00000520233 DCLK1O15075 740 aa18.31■□□□□ 0.52
SDC2-205ENST00000520233 ZNF500O60304 480 aaPredicted RBP18.31■□□□□ 0.52
SDC2-205ENST00000520233 LUC7L3O95232 432 aaKnown RBP18.31■□□□□ 0.52
SDC2-205ENST00000520233 SRFP11831 508 aa18.31■□□□□ 0.52
SDC2-205ENST00000520233 TCP1P17987 556 aaKnown RBP18.31■□□□□ 0.52
SDC2-205ENST00000520233 MAPKAPK2P49137 400 aa18.31■□□□□ 0.52
SDC2-205ENST00000520233 ZNF177Q13360 481 aaPredicted RBP18.31■□□□□ 0.52
SDC2-205ENST00000520233 AADACL2Q6P093 401 aa18.31■□□□□ 0.52
SDC2-205ENST00000520233 RFX6Q8HWS3 928 aa18.31■□□□□ 0.52
SDC2-205ENST00000520233 CCDC117Q8IWD4 279 aaPredicted RBP18.31■□□□□ 0.52
SDC2-205ENST00000520233 PQLC3Q8N755 202 aa18.31■□□□□ 0.52
SDC2-205ENST00000520233 ZNF557Q8N988 423 aaPredicted RBP18.31■□□□□ 0.52
SDC2-205ENST00000520233 BHMTQ93088 406 aa18.31■□□□□ 0.52
SDC2-205ENST00000520233 OSBPL9Q96SU4 736 aa18.31■□□□□ 0.52
SDC2-205ENST00000520233 SLC2A11Q9BYW1 496 aa18.31■□□□□ 0.52
SDC2-205ENST00000520233 OSBPL8Q9BZF1 889 aa18.31■□□□□ 0.52
SDC2-205ENST00000520233 SLC2A4RGQ9NR83 387 aa18.31■□□□□ 0.52
SDC2-205ENST00000520233 H0Y626 953 aa18.3■□□□□ 0.52
SDC2-205ENST00000520233 CES2O00748 559 aa18.3■□□□□ 0.52
SDC2-205ENST00000520233 CACNG3O60359 315 aa18.3■□□□□ 0.52
SDC2-205ENST00000520233 KRT10P13645 584 aa18.3■□□□□ 0.52
SDC2-205ENST00000520233 ZFXP17010 805 aaPredicted RBP18.3■□□□□ 0.52
SDC2-205ENST00000520233 CXCR5P32302 372 aa18.3■□□□□ 0.52
SDC2-205ENST00000520233 GJA4P35212 333 aa18.3■□□□□ 0.52
SDC2-205ENST00000520233 PFKPQ01813 784 aa18.3■□□□□ 0.52
SDC2-205ENST00000520233 TFDP2Q14188 446 aa18.3■□□□□ 0.52
SDC2-205ENST00000520233 GAB4Q2WGN9 574 aa18.3■□□□□ 0.52
SDC2-205ENST00000520233 KAZNQ674X7 775 aa18.3■□□□□ 0.52
SDC2-205ENST00000520233 SLC9A4Q6AI14 798 aa18.3■□□□□ 0.52
SDC2-205ENST00000520233 TMCO3Q6UWJ1 677 aa18.3■□□□□ 0.52
SDC2-205ENST00000520233 TFAP2DQ7Z6R9 452 aa18.3■□□□□ 0.52
SDC2-205ENST00000520233 SETD3Q86TU7 594 aaPredicted RBP18.3■□□□□ 0.52
SDC2-205ENST00000520233 MFN1Q8IWA4 741 aa18.3■□□□□ 0.52
SDC2-205ENST00000520233 CARNMT1Q8N4J0 409 aa18.3■□□□□ 0.52
SDC2-205ENST00000520233 FIBINQ8TAL6 211 aa18.3■□□□□ 0.52
SDC2-205ENST00000520233 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.3■□□□□ 0.52
SDC2-205ENST00000520233 XPO6Q96QU8 1125 aaKnown RBP18.3■□□□□ 0.52
SDC2-205ENST00000520233 FBXO10Q9UK96 956 aa18.3■□□□□ 0.52
SDC2-205ENST00000520233 SORCS3Q9UPU3 1222 aa18.3■□□□□ 0.52
SDC2-205ENST00000520233 TBC1D30Q9Y2I9 924 aa18.3■□□□□ 0.52
SDC2-205ENST00000520233 APOL1O14791 398 aa18.29■□□□□ 0.52
SDC2-205ENST00000520233 NARSO43776 548 aaKnown RBP18.29■□□□□ 0.52
SDC2-205ENST00000520233 OR1E1P30953 314 aa18.29■□□□□ 0.52
SDC2-205ENST00000520233 OXCT1P55809 520 aa18.29■□□□□ 0.52
SDC2-205ENST00000520233 CDH18Q13634 790 aa18.29■□□□□ 0.52
SDC2-205ENST00000520233 PAFAH1B3Q15102 231 aaKnown RBP18.29■□□□□ 0.52
SDC2-205ENST00000520233 C6orf118Q5T5N4 469 aa18.29■□□□□ 0.52
SDC2-205ENST00000520233 NCBP2-AS2Q69YL0 99 aa18.29■□□□□ 0.52
SDC2-205ENST00000520233 BBS12Q6ZW61 710 aa18.29■□□□□ 0.52
SDC2-205ENST00000520233 ETFBKMTQ8IXQ9 262 aa18.29■□□□□ 0.52
SDC2-205ENST00000520233 RASGEF1CQ8N431 466 aa18.29■□□□□ 0.52
SDC2-205ENST00000520233 LZTR1Q8N653 840 aa18.29■□□□□ 0.52
SDC2-205ENST00000520233 TTC8Q8TAM2 541 aa18.29■□□□□ 0.52
SDC2-205ENST00000520233 HEMGNQ9BXL5 484 aa18.29■□□□□ 0.52
SDC2-205ENST00000520233 NDFIP2Q9NV92 336 aa18.29■□□□□ 0.52
SDC2-205ENST00000520233 ETNK2Q9NVF9 386 aa18.29■□□□□ 0.52
SDC2-205ENST00000520233 CLEC4EQ9ULY5 219 aa18.29■□□□□ 0.52
SDC2-205ENST00000520233 DUSP12Q9UNI6 340 aa18.29■□□□□ 0.52
SDC2-205ENST00000520233 SAR1BQ9Y6B6 198 aa18.29■□□□□ 0.52
SDC2-205ENST00000520233 CEP104O60308 925 aa18.28■□□□□ 0.52
SDC2-205ENST00000520233 CST8O60676 142 aa18.28■□□□□ 0.52
SDC2-205ENST00000520233 TJP3O95049 919 aa18.28■□□□□ 0.52
SDC2-205ENST00000520233 SERPINB6P35237 376 aa18.28■□□□□ 0.52
SDC2-205ENST00000520233 EIF2DP41214 584 aaKnown RBP18.28■□□□□ 0.52
SDC2-205ENST00000520233 AMPD2Q01433 879 aa18.28■□□□□ 0.52
SDC2-205ENST00000520233 ADCY2Q08462 1091 aa18.28■□□□□ 0.52
SDC2-205ENST00000520233 LLGL1Q15334 1064 aa18.28■□□□□ 0.52
SDC2-205ENST00000520233 CXorf57Q6NSI4 855 aaKnown RBP18.28■□□□□ 0.52
SDC2-205ENST00000520233 ZNF783Q6ZMS7 281 aa18.28■□□□□ 0.52
SDC2-205ENST00000520233 RNF135Q8IUD6 432 aa18.28■□□□□ 0.52
SDC2-205ENST00000520233 GJD3Q8N144 294 aa18.28■□□□□ 0.52
SDC2-205ENST00000520233 UMODL1-AS1Q8N2C9 162 aa18.28■□□□□ 0.52
SDC2-205ENST00000520233 PLD5Q8N7P1 536 aa18.28■□□□□ 0.52
SDC2-205ENST00000520233 NAT16Q8N8M0 369 aa18.28■□□□□ 0.52
SDC2-205ENST00000520233 HERPUD2Q9BSE4 406 aa18.28■□□□□ 0.52
SDC2-205ENST00000520233 KLC2Q9H0B6 622 aa18.28■□□□□ 0.52
SDC2-205ENST00000520233 C8orf33Q9H7E9 229 aaPredicted RBP18.28■□□□□ 0.52
SDC2-205ENST00000520233 ILVBLA1L0T0 632 aa18.27■□□□□ 0.52
SDC2-205ENST00000520233 TULP3O75386 442 aa18.27■□□□□ 0.52
SDC2-205ENST00000520233 RHOCP08134 193 aa18.27■□□□□ 0.52
SDC2-205ENST00000520233 CISD3P0C7P0 127 aa18.27■□□□□ 0.52
SDC2-205ENST00000520233 TGM2P21980 687 aa18.27■□□□□ 0.52
SDC2-205ENST00000520233 NDST2P52849 883 aa18.27■□□□□ 0.52
SDC2-205ENST00000520233 YBEYP58557 167 aaPredicted RBP18.27■□□□□ 0.52
SDC2-205ENST00000520233 DYNLT1P63172 113 aa18.27■□□□□ 0.52
SDC2-205ENST00000520233 SLC12A1Q13621 1099 aa18.27■□□□□ 0.52
SDC2-205ENST00000520233 FSCBQ5H9T9 825 aa18.27■□□□□ 0.52
SDC2-205ENST00000520233 TJAP1Q5JTD0 557 aa18.27■□□□□ 0.52
SDC2-205ENST00000520233 AFMIDQ63HM1 303 aa18.27■□□□□ 0.52
SDC2-205ENST00000520233 C12orf40Q86WS4 652 aa18.27■□□□□ 0.52
SDC2-205ENST00000520233 SLC13A5Q86YT5 568 aaPredicted RBP18.27■□□□□ 0.52
SDC2-205ENST00000520233 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.27■□□□□ 0.52
SDC2-205ENST00000520233 NPWQ8N729 165 aa18.27■□□□□ 0.52
SDC2-205ENST00000520233 WFDC5Q8TCV5 224 aa18.27■□□□□ 0.52
SDC2-205ENST00000520233 COG1Q8WTW3 980 aa18.27■□□□□ 0.52
SDC2-205ENST00000520233 LMLNQ96KR4 655 aa18.27■□□□□ 0.52
SDC2-205ENST00000520233 DNAJC17Q9NVM6 304 aaKnown RBP18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms