RNA–Protein interactions for RNA: ENST00000520166.5

TSNARE1-205, Transcript of t-SNARE domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSNARE1, Length 1,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSNARE1-205ENST00000520166 ZSCAN5DPP0CG00 497 aa17.5■□□□□ 0.39
TSNARE1-205ENST00000520166 PFKLP17858 780 aa17.5■□□□□ 0.39
TSNARE1-205ENST00000520166 KCNA5P22460 613 aa17.5■□□□□ 0.39
TSNARE1-205ENST00000520166 EIF3EP60228 445 aaKnown RBP17.5■□□□□ 0.39
TSNARE1-205ENST00000520166 TRIP13Q15645 432 aaPredicted RBP17.5■□□□□ 0.39
TSNARE1-205ENST00000520166 OASLQ15646 514 aaKnown RBP17.5■□□□□ 0.39
TSNARE1-205ENST00000520166 TMCO3Q6UWJ1 677 aa17.5■□□□□ 0.39
TSNARE1-205ENST00000520166 LRRC31Q6UY01 552 aa17.5■□□□□ 0.39
TSNARE1-205ENST00000520166 TMEM25Q86YD3 366 aa17.5■□□□□ 0.39
TSNARE1-205ENST00000520166 C12orf50Q8NA57 414 aaPredicted RBP17.5■□□□□ 0.39
TSNARE1-205ENST00000520166 WFDC5Q8TCV5 224 aa17.5■□□□□ 0.39
TSNARE1-205ENST00000520166 TRIM51Q9BSJ1 452 aa17.5■□□□□ 0.39
TSNARE1-205ENST00000520166 SLC39A8Q9C0K1 460 aa17.5■□□□□ 0.39
TSNARE1-205ENST00000520166 PPARGC1AQ9UBK2 798 aaKnown RBP17.5■□□□□ 0.39
TSNARE1-205ENST00000520166 CDH7Q9ULB5 785 aa17.5■□□□□ 0.39
TSNARE1-205ENST00000520166 USP15Q9Y4E8 981 aaPredicted RBP17.5■□□□□ 0.39
TSNARE1-205ENST00000520166 DOCK4Q8N1I0 1966 aa17.49■□□□□ 0.39
TSNARE1-205ENST00000520166 TBL1XO60907 577 aa17.49■□□□□ 0.39
TSNARE1-205ENST00000520166 TGM2P21980 687 aa17.49■□□□□ 0.39
TSNARE1-205ENST00000520166 USP4Q13107 963 aa17.49■□□□□ 0.39
TSNARE1-205ENST00000520166 SKIV2LQ15477 1246 aaKnown RBP17.49■□□□□ 0.39
TSNARE1-205ENST00000520166 C5orf22Q49AR2 442 aa17.49■□□□□ 0.39
TSNARE1-205ENST00000520166 FSCBQ5H9T9 825 aa17.49■□□□□ 0.39
TSNARE1-205ENST00000520166 FAM217AQ8IXS0 508 aa17.49■□□□□ 0.39
TSNARE1-205ENST00000520166 RTL3Q8N8U3 475 aaKnown RBP17.49■□□□□ 0.39
TSNARE1-205ENST00000520166 SMARCD2Q92925 531 aa17.49■□□□□ 0.39
TSNARE1-205ENST00000520166 DMGDHQ9UI17 866 aaKnown RBP17.49■□□□□ 0.39
TSNARE1-205ENST00000520166 COL6A3P12111 3177 aa17.49■□□□□ 0.39
TSNARE1-205ENST00000520166 GOLGA6L10A0A0M3HER8 536 aa17.48■□□□□ 0.39
TSNARE1-205ENST00000520166 E2F8A0AVK6 867 aa17.48■□□□□ 0.39
TSNARE1-205ENST00000520166 RBP3P10745 1247 aa17.48■□□□□ 0.39
TSNARE1-205ENST00000520166 RHOQP17081 205 aa17.48■□□□□ 0.39
TSNARE1-205ENST00000520166 GBP2P32456 591 aaPredicted RBP17.48■□□□□ 0.39
TSNARE1-205ENST00000520166 BYSLQ13895 437 aaKnown RBP17.48■□□□□ 0.39
TSNARE1-205ENST00000520166 PARM1Q6UWI2 310 aa17.48■□□□□ 0.39
TSNARE1-205ENST00000520166 TDRD5Q8NAT2 981 aaKnown RBP17.48■□□□□ 0.39
TSNARE1-205ENST00000520166 OLFM3Q96PB7 478 aa17.48■□□□□ 0.39
TSNARE1-205ENST00000520166 CD207Q9UJ71 328 aa17.48■□□□□ 0.39
TSNARE1-205ENST00000520166 LSM7Q9UK45 103 aaKnown RBP17.48■□□□□ 0.39
TSNARE1-205ENST00000520166 A0A0D9SEW6 157 aa17.47■□□□□ 0.39
TSNARE1-205ENST00000520166 HEPACAM2A8MVW5 462 aa17.47■□□□□ 0.39
TSNARE1-205ENST00000520166 H7C0C1 242 aa17.47■□□□□ 0.39
TSNARE1-205ENST00000520166 CCDC188H7C350 402 aa17.47■□□□□ 0.39
TSNARE1-205ENST00000520166 DFFAO00273 331 aa17.47■□□□□ 0.39
TSNARE1-205ENST00000520166 FOSL2P15408 326 aa17.47■□□□□ 0.39
TSNARE1-205ENST00000520166 VAV1P15498 845 aa17.47■□□□□ 0.39
TSNARE1-205ENST00000520166 RBL1P28749 1068 aa17.47■□□□□ 0.39
TSNARE1-205ENST00000520166 ACVRL1P37023 503 aa17.47■□□□□ 0.39
TSNARE1-205ENST00000520166 ATP5OP48047 213 aa17.47■□□□□ 0.39
TSNARE1-205ENST00000520166 TERF1P54274 439 aa17.47■□□□□ 0.39
TSNARE1-205ENST00000520166 CCDC105Q8IYK2 499 aa17.47■□□□□ 0.39
TSNARE1-205ENST00000520166 CELF5Q8N6W0 485 aaKnown RBP17.47■□□□□ 0.39
TSNARE1-205ENST00000520166 MAIP1Q8WWC4 291 aa17.47■□□□□ 0.39
TSNARE1-205ENST00000520166 SUSD6Q92537 303 aa17.47■□□□□ 0.39
TSNARE1-205ENST00000520166 TMA16Q96EY4 203 aaKnown RBP17.47■□□□□ 0.39
TSNARE1-205ENST00000520166 KXD1Q9BQD3 176 aa17.47■□□□□ 0.39
TSNARE1-205ENST00000520166 CEP41Q9BYV8 373 aa17.47■□□□□ 0.39
TSNARE1-205ENST00000520166 CATSPERBQ9H7T0 1116 aa17.47■□□□□ 0.39
TSNARE1-205ENST00000520166 USP29Q9HBJ7 922 aa17.47■□□□□ 0.39
TSNARE1-205ENST00000520166 TMEM248Q9NWD8 314 aa17.47■□□□□ 0.39
TSNARE1-205ENST00000520166 ZNF148Q9UQR1 794 aa17.47■□□□□ 0.39
TSNARE1-205ENST00000520166 OTOL1A6NHN0 477 aaPredicted RBP17.47■□□□□ 0.39
TSNARE1-205ENST00000520166 SOBPA7XYQ1 873 aa17.47■□□□□ 0.39
TSNARE1-205ENST00000520166 EFCAB8A8MWE9 144 aa17.47■□□□□ 0.39
TSNARE1-205ENST00000520166 WASH4PA8MWX3 477 aa17.47■□□□□ 0.39
TSNARE1-205ENST00000520166 ZFXP17010 805 aaPredicted RBP17.47■□□□□ 0.39
TSNARE1-205ENST00000520166 CHRNA3P32297 505 aa17.47■□□□□ 0.39
TSNARE1-205ENST00000520166 AFMIDQ63HM1 303 aa17.47■□□□□ 0.39
TSNARE1-205ENST00000520166 DARS2Q6PI48 645 aaKnown RBP17.47■□□□□ 0.39
TSNARE1-205ENST00000520166 LEKR1Q6ZMV7 388 aa17.47■□□□□ 0.39
TSNARE1-205ENST00000520166 ADGRG2Q8IZP9 1017 aa17.47■□□□□ 0.39
TSNARE1-205ENST00000520166 TAB3Q8N5C8 712 aaPredicted RBP17.47■□□□□ 0.39
TSNARE1-205ENST00000520166 FAM71DQ8N9W8 422 aa17.47■□□□□ 0.39
TSNARE1-205ENST00000520166 MYRIPQ8NFW9 859 aa17.47■□□□□ 0.39
TSNARE1-205ENST00000520166 FGF14Q92915 247 aa17.47■□□□□ 0.39
TSNARE1-205ENST00000520166 NKD2Q969F2 451 aaPredicted RBP17.47■□□□□ 0.39
TSNARE1-205ENST00000520166 CCDC114Q96M63 670 aa17.47■□□□□ 0.39
TSNARE1-205ENST00000520166 RIPOR3Q96MK2 946 aa17.47■□□□□ 0.39
TSNARE1-205ENST00000520166 UBE2ZQ9H832 354 aaPredicted RBP17.47■□□□□ 0.39
TSNARE1-205ENST00000520166 ANKZF1Q9H8Y5 726 aa17.47■□□□□ 0.39
TSNARE1-205ENST00000520166 TMEM51Q9NW97 253 aa17.47■□□□□ 0.39
TSNARE1-205ENST00000520166 GDE1Q9NZC3 331 aa17.47■□□□□ 0.39
TSNARE1-205ENST00000520166 PCYOX1Q9UHG3 505 aa17.47■□□□□ 0.39
TSNARE1-205ENST00000520166 ACTL7AQ9Y615 435 aa17.47■□□□□ 0.39
TSNARE1-205ENST00000520166 ESYT3A0FGR9 886 aa17.46■□□□□ 0.39
TSNARE1-205ENST00000520166 FGF10O15520 208 aaPredicted RBP17.46■□□□□ 0.39
TSNARE1-205ENST00000520166 LAMP2P13473 410 aa17.46■□□□□ 0.39
TSNARE1-205ENST00000520166 ARSAP15289 507 aa17.46■□□□□ 0.39
TSNARE1-205ENST00000520166 OR1E1P30953 314 aa17.46■□□□□ 0.39
TSNARE1-205ENST00000520166 PAPOLAP51003 745 aaKnown RBP17.46■□□□□ 0.39
TSNARE1-205ENST00000520166 DR1Q01658 176 aa17.46■□□□□ 0.39
TSNARE1-205ENST00000520166 TNK2Q07912 1038 aa17.46■□□□□ 0.39
TSNARE1-205ENST00000520166 GRM2Q14416 872 aa17.46■□□□□ 0.39
TSNARE1-205ENST00000520166 VITQ6UXI7 678 aa17.46■□□□□ 0.39
TSNARE1-205ENST00000520166 CARNMT1Q8N4J0 409 aa17.46■□□□□ 0.39
TSNARE1-205ENST00000520166 CCNYQ8ND76 341 aa17.46■□□□□ 0.39
TSNARE1-205ENST00000520166 OR7D4Q8NG98 312 aa17.46■□□□□ 0.39
TSNARE1-205ENST00000520166 DDI1Q8WTU0 396 aa17.46■□□□□ 0.39
TSNARE1-205ENST00000520166 RSAD2Q8WXG1 361 aa17.46■□□□□ 0.39
TSNARE1-205ENST00000520166 HMCESQ96FZ2 354 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms