RNA–Protein interactions for RNA: ENST00000519617.1

CCNC-208, Transcript of cyclin C, humanhuman

TSL 3

Gene CCNC, Length 246 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-208ENST00000519617 RFX6Q8HWS3 928 aa2.16□□□□□ -2.06
CCNC-208ENST00000519617 SMC5Q8IY18 1101 aa2.16□□□□□ -2.06
CCNC-208ENST00000519617 C16orf71Q8IYS4 520 aaPredicted RBP2.16□□□□□ -2.06
CCNC-208ENST00000519617 CELF5Q8N6W0 485 aaKnown RBP2.16□□□□□ -2.06
CCNC-208ENST00000519617 DNAJC5GQ8N7S2 189 aa2.16□□□□□ -2.06
CCNC-208ENST00000519617 BCAS4Q8TDM0 211 aa2.16□□□□□ -2.06
CCNC-208ENST00000519617 DNASE2BQ8WZ79 361 aa2.16□□□□□ -2.06
CCNC-208ENST00000519617 NR4A3Q92570 626 aa2.16□□□□□ -2.06
CCNC-208ENST00000519617 SLC25A28Q96A46 364 aa2.16□□□□□ -2.06
CCNC-208ENST00000519617 EVI5LQ96CN4 794 aa2.16□□□□□ -2.06
CCNC-208ENST00000519617 KAZALD1Q96I82 304 aa2.16□□□□□ -2.06
CCNC-208ENST00000519617 SUCLG2Q96I99 432 aa2.16□□□□□ -2.06
CCNC-208ENST00000519617 MRGPRX1Q96LB2 322 aa2.16□□□□□ -2.06
CCNC-208ENST00000519617 NLRP4Q96MN2 994 aa2.16□□□□□ -2.06
CCNC-208ENST00000519617 PSMD1Q99460 953 aa2.16□□□□□ -2.06
CCNC-208ENST00000519617 NACAP1Q9BZK3 213 aa2.16□□□□□ -2.06
CCNC-208ENST00000519617 SIL1Q9H173 461 aa2.16□□□□□ -2.06
CCNC-208ENST00000519617 TRIM36Q9NQ86 728 aa2.16□□□□□ -2.06
CCNC-208ENST00000519617 ECHDC1Q9NTX5 307 aa2.16□□□□□ -2.06
CCNC-208ENST00000519617 TMOD2Q9NZR1 351 aa2.16□□□□□ -2.06
CCNC-208ENST00000519617 USP22Q9UPT9 525 aa2.16□□□□□ -2.06
CCNC-208ENST00000519617 AFDNP55196 1824 aaKnown RBP2.16□□□□□ -2.06
CCNC-208ENST00000519617 NUP188Q5SRE5 1749 aa2.16□□□□□ -2.06
CCNC-208ENST00000519617 MYH14Q7Z406 1995 aaKnown RBP2.16□□□□□ -2.06
CCNC-208ENST00000519617 PDS5AQ29RF7 1337 aaKnown RBP2.16□□□□□ -2.06
CCNC-208ENST00000519617 UBN2Q6ZU65 1347 aa2.16□□□□□ -2.06
CCNC-208ENST00000519617 ANKRD36CQ5JPF3 1778 aa2.15□□□□□ -2.06
CCNC-208ENST00000519617 BCORQ6W2J9 1755 aa2.15□□□□□ -2.06
CCNC-208ENST00000519617 N4BP2Q86UW6 1770 aaPredicted RBP2.15□□□□□ -2.06
CCNC-208ENST00000519617 MYH3P11055 1940 aa2.15□□□□□ -2.06
CCNC-208ENST00000519617 RFX7Q2KHR2 1363 aa2.15□□□□□ -2.07
CCNC-208ENST00000519617 MED23Q9ULK4 1368 aa2.15□□□□□ -2.07
CCNC-208ENST00000519617 C4AP0C0L4 1744 aa2.15□□□□□ -2.07
CCNC-208ENST00000519617 A0A1B0GUL7 405 aa2.15□□□□□ -2.07
CCNC-208ENST00000519617 PRSS47A8MTI9 375 aa2.15□□□□□ -2.07
CCNC-208ENST00000519617 ZNF814B7Z6K7 855 aa2.15□□□□□ -2.07
CCNC-208ENST00000519617 SPTLC2O15270 562 aa2.15□□□□□ -2.07
CCNC-208ENST00000519617 PPIP5K2O43314 1243 aa2.15□□□□□ -2.07
CCNC-208ENST00000519617 EPB41L2O43491 1005 aaKnown RBP2.15□□□□□ -2.07
CCNC-208ENST00000519617 UFL1O94874 794 aa2.15□□□□□ -2.07
CCNC-208ENST00000519617 CD63P08962 238 aa2.15□□□□□ -2.07
CCNC-208ENST00000519617 PLA2G2AP14555 144 aa2.15□□□□□ -2.07
CCNC-208ENST00000519617 DPEP1P16444 411 aa2.15□□□□□ -2.07
CCNC-208ENST00000519617 ZKSCAN1P17029 563 aaPredicted RBP2.15□□□□□ -2.07
CCNC-208ENST00000519617 CCND1P24385 295 aa2.15□□□□□ -2.07
CCNC-208ENST00000519617 TNFRSF8P28908 595 aa2.15□□□□□ -2.07
CCNC-208ENST00000519617 EPHA3P29320 983 aa2.15□□□□□ -2.07
CCNC-208ENST00000519617 TACR3P29371 465 aa2.15□□□□□ -2.07
CCNC-208ENST00000519617 PRKAR1BP31321 381 aa2.15□□□□□ -2.07
CCNC-208ENST00000519617 RECQLP46063 649 aaPredicted RBP2.15□□□□□ -2.07
CCNC-208ENST00000519617 ARFIP2P53365 341 aa2.15□□□□□ -2.07
CCNC-208ENST00000519617 TIRAPP58753 221 aa2.15□□□□□ -2.07
CCNC-208ENST00000519617 IRX6P78412 446 aaPredicted RBP2.15□□□□□ -2.07
CCNC-208ENST00000519617 CHRNDQ07001 517 aa2.15□□□□□ -2.07
CCNC-208ENST00000519617 DDR1Q08345 913 aa2.15□□□□□ -2.07
CCNC-208ENST00000519617 SLC14A1Q13336 389 aa2.15□□□□□ -2.07
CCNC-208ENST00000519617 FAM110CQ1W6H9 321 aa2.15□□□□□ -2.07
CCNC-208ENST00000519617 CCDC157Q569K6 752 aa2.15□□□□□ -2.07
CCNC-208ENST00000519617 C20orf194Q5TEA3 1177 aa2.15□□□□□ -2.07
CCNC-208ENST00000519617 ATG9BQ674R7 924 aa2.15□□□□□ -2.07
CCNC-208ENST00000519617 ZNF324BQ6AW86 544 aaPredicted RBP2.15□□□□□ -2.07
CCNC-208ENST00000519617 CAPRIN2Q6IMN6 1127 aaKnown RBP2.15□□□□□ -2.07
CCNC-208ENST00000519617 DZIP1Q86YF9 867 aaKnown RBP2.15□□□□□ -2.07
CCNC-208ENST00000519617 SPARTQ8N0X7 666 aa2.15□□□□□ -2.07
CCNC-208ENST00000519617 SLC15A4Q8N697 577 aa2.15□□□□□ -2.07
CCNC-208ENST00000519617 C12orf76Q8N812 135 aaPredicted RBP2.15□□□□□ -2.07
CCNC-208ENST00000519617 MTFMTQ96DP5 389 aaKnown RBP2.15□□□□□ -2.07
CCNC-208ENST00000519617 MTMR8Q96EF0 704 aa2.15□□□□□ -2.07
CCNC-208ENST00000519617 EDC3Q96F86 508 aaKnown RBP2.15□□□□□ -2.07
CCNC-208ENST00000519617 HIC2Q96JB3 615 aa2.15□□□□□ -2.07
CCNC-208ENST00000519617 HS6ST2Q96MM7 605 aa2.15□□□□□ -2.07
CCNC-208ENST00000519617 FSD1Q9BTV5 496 aa2.15□□□□□ -2.07
CCNC-208ENST00000519617 VN1R3Q9BXE9 311 aa2.15□□□□□ -2.07
CCNC-208ENST00000519617 RTFDC1Q9BY42 306 aaPredicted RBP2.15□□□□□ -2.07
CCNC-208ENST00000519617 TRIM5Q9C035 493 aa2.15□□□□□ -2.07
CCNC-208ENST00000519617 DIAPH3Q9NSV4 1193 aa2.15□□□□□ -2.07
CCNC-208ENST00000519617 PIH1D1Q9NWS0 290 aaKnown RBP2.15□□□□□ -2.07
CCNC-208ENST00000519617 CTNNA3Q9UI47 895 aa2.15□□□□□ -2.07
CCNC-208ENST00000519617 EXOC6BQ9Y2D4 811 aa2.15□□□□□ -2.07
CCNC-208ENST00000519617 RIPOR2Q9Y4F9 1068 aa2.15□□□□□ -2.07
CCNC-208ENST00000519617 SPEF1Q9Y4P9 236 aa2.15□□□□□ -2.07
CCNC-208ENST00000519617 C10orf71Q711Q0 1435 aa2.15□□□□□ -2.07
CCNC-208ENST00000519617 RAD50Q92878 1312 aa2.15□□□□□ -2.07
CCNC-208ENST00000519617 RPAP1Q9BWH6 1393 aaPredicted RBP2.14□□□□□ -2.07
CCNC-208ENST00000519617 LAMB2P55268 1798 aa2.14□□□□□ -2.07
CCNC-208ENST00000519617 A0A0G2JLW4 131 aa2.14□□□□□ -2.07
CCNC-208ENST00000519617 PNMA6EA0A0J9YXQ4 647 aa2.14□□□□□ -2.07
CCNC-208ENST00000519617 C2CD4BA6NLJ0 364 aa2.14□□□□□ -2.07
CCNC-208ENST00000519617 IFITM10A6NMD0 228 aa2.14□□□□□ -2.07
CCNC-208ENST00000519617 ACOT8O14734 319 aa2.14□□□□□ -2.07
CCNC-208ENST00000519617 CTIFO43310 598 aaKnown RBP2.14□□□□□ -2.07
CCNC-208ENST00000519617 AKAP10O43572 662 aa2.14□□□□□ -2.07
CCNC-208ENST00000519617 TLX3O43711 291 aaPredicted RBP2.14□□□□□ -2.07
CCNC-208ENST00000519617 KATNA1O75449 491 aa2.14□□□□□ -2.07
CCNC-208ENST00000519617 WDHD1O75717 1129 aaPredicted RBP2.14□□□□□ -2.07
CCNC-208ENST00000519617 GAS8-AS1O95177 125 aa2.14□□□□□ -2.07
CCNC-208ENST00000519617 EPN2O95208 641 aa2.14□□□□□ -2.07
CCNC-208ENST00000519617 HMGB1P09429 215 aaKnown RBP2.14□□□□□ -2.07
CCNC-208ENST00000519617 PCP11498 1178 aaKnown RBP2.14□□□□□ -2.07
CCNC-208ENST00000519617 IL1R1P14778 569 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms