RNA–Protein interactions for RNA: ENST00000518959.1

ATP6V1C1-204, Transcript of ATPase H+ transporting V1 subunit C1, humanhuman

TSL 2

Gene ATP6V1C1, Length 553 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1C1-204ENST00000518959 FGAP02671 866 aa3.35□□□□□ -1.87
ATP6V1C1-204ENST00000518959 AHSGP02765 367 aa3.35□□□□□ -1.87
ATP6V1C1-204ENST00000518959 PIM1P11309 404 aaPredicted RBP3.35□□□□□ -1.87
ATP6V1C1-204ENST00000518959 TYRP14679 529 aa3.35□□□□□ -1.87
ATP6V1C1-204ENST00000518959 ENTPD1P49961 510 aa3.35□□□□□ -1.87
ATP6V1C1-204ENST00000518959 PDE6CP51160 858 aa3.35□□□□□ -1.87
ATP6V1C1-204ENST00000518959 MAP2K6P52564 334 aa3.35□□□□□ -1.87
ATP6V1C1-204ENST00000518959 RBM5P52756 815 aaKnown RBP eCLIP3.35□□□□□ -1.87
ATP6V1C1-204ENST00000518959 PRKCZQ05513 592 aa3.35□□□□□ -1.87
ATP6V1C1-204ENST00000518959 PRKG1Q13976 671 aa3.35□□□□□ -1.87
ATP6V1C1-204ENST00000518959 FAM110CQ1W6H9 321 aa3.35□□□□□ -1.87
ATP6V1C1-204ENST00000518959 USP45Q70EL2 814 aa3.35□□□□□ -1.87
ATP6V1C1-204ENST00000518959 CAND1Q86VP6 1230 aaKnown RBP3.35□□□□□ -1.87
ATP6V1C1-204ENST00000518959 CPA6Q8N4T0 437 aa3.35□□□□□ -1.87
ATP6V1C1-204ENST00000518959 IQCF1Q8N6M8 205 aa3.35□□□□□ -1.87
ATP6V1C1-204ENST00000518959 TDRD7Q8NHU6 1098 aaKnown RBP3.35□□□□□ -1.87
ATP6V1C1-204ENST00000518959 SMCR8Q8TEV9 937 aaPredicted RBP3.35□□□□□ -1.87
ATP6V1C1-204ENST00000518959 OSCP1Q8WVF1 389 aa3.35□□□□□ -1.87
ATP6V1C1-204ENST00000518959 NEUROG1Q92886 237 aa3.35□□□□□ -1.87
ATP6V1C1-204ENST00000518959 CLMNQ96JQ2 1002 aa3.35□□□□□ -1.87
ATP6V1C1-204ENST00000518959 GUCD1Q96NT3 240 aa3.35□□□□□ -1.87
ATP6V1C1-204ENST00000518959 CDX2Q99626 313 aaPredicted RBP3.35□□□□□ -1.87
ATP6V1C1-204ENST00000518959 POLR3GLQ9BT43 218 aa3.35□□□□□ -1.87
ATP6V1C1-204ENST00000518959 ASPSCR1Q9BZE9 553 aa3.35□□□□□ -1.87
ATP6V1C1-204ENST00000518959 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.35□□□□□ -1.87
ATP6V1C1-204ENST00000518959 MYLK2Q9H1R3 596 aa3.35□□□□□ -1.87
ATP6V1C1-204ENST00000518959 MTIF3Q9H2K0 278 aaKnown RBP3.35□□□□□ -1.87
ATP6V1C1-204ENST00000518959 TMEM8AQ9HCN3 771 aa3.35□□□□□ -1.87
ATP6V1C1-204ENST00000518959 CD209Q9NNX6 404 aa3.35□□□□□ -1.87
ATP6V1C1-204ENST00000518959 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.35□□□□□ -1.87
ATP6V1C1-204ENST00000518959 CWC25Q9NXE8 425 aaPredicted RBP3.35□□□□□ -1.87
ATP6V1C1-204ENST00000518959 THEGQ9P2T0 379 aa3.35□□□□□ -1.87
ATP6V1C1-204ENST00000518959 FEZ2Q9UHY8 353 aaPredicted RBP3.35□□□□□ -1.87
ATP6V1C1-204ENST00000518959 NDRG4Q9ULP0 352 aaKnown RBP3.35□□□□□ -1.87
ATP6V1C1-204ENST00000518959 SPEF1Q9Y4P9 236 aa3.35□□□□□ -1.87
ATP6V1C1-204ENST00000518959 DDX60Q8IY21 1712 aaKnown RBP3.35□□□□□ -1.87
ATP6V1C1-204ENST00000518959 SZT2Q5T011 3432 aa3.35□□□□□ -1.87
ATP6V1C1-204ENST00000518959 CENPFP49454 3210 aa3.34□□□□□ -1.87
ATP6V1C1-204ENST00000518959 SSC5DA1L4H1 1573 aa3.34□□□□□ -1.87
ATP6V1C1-204ENST00000518959 LRRC37AA6NMS7 1700 aa3.34□□□□□ -1.87
ATP6V1C1-204ENST00000518959 KDM3BQ7LBC6 1761 aa3.34□□□□□ -1.87
ATP6V1C1-204ENST00000518959 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.34□□□□□ -1.87
ATP6V1C1-204ENST00000518959 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.34□□□□□ -1.87
ATP6V1C1-204ENST00000518959 DNM1LO00429 736 aa3.34□□□□□ -1.87
ATP6V1C1-204ENST00000518959 IGSF3O75054 1194 aa3.34□□□□□ -1.87
ATP6V1C1-204ENST00000518959 FTLP02792 175 aaPredicted RBP3.34□□□□□ -1.87
ATP6V1C1-204ENST00000518959 POU2F2P09086 479 aa3.34□□□□□ -1.87
ATP6V1C1-204ENST00000518959 MAPK4P31152 587 aa3.34□□□□□ -1.87
ATP6V1C1-204ENST00000518959 RECQLP46063 649 aaPredicted RBP3.34□□□□□ -1.87
ATP6V1C1-204ENST00000518959 SATB1Q01826 763 aa3.34□□□□□ -1.87
ATP6V1C1-204ENST00000518959 TMEM31Q5JXX7 168 aa3.34□□□□□ -1.87
ATP6V1C1-204ENST00000518959 CC2D1BQ5T0F9 858 aaKnown RBP3.34□□□□□ -1.87
ATP6V1C1-204ENST00000518959 MAP3K21Q5TCX8 1036 aa3.34□□□□□ -1.87
ATP6V1C1-204ENST00000518959 EMC10Q5UCC4 262 aa3.34□□□□□ -1.87
ATP6V1C1-204ENST00000518959 Q7L0L9 218 aa3.34□□□□□ -1.87
ATP6V1C1-204ENST00000518959 HERVK_113Q902F9 699 aa3.34□□□□□ -1.87
ATP6V1C1-204ENST00000518959 TEKT1Q969V4 418 aa3.34□□□□□ -1.87
ATP6V1C1-204ENST00000518959 FAM167AQ96KS9 214 aa3.34□□□□□ -1.87
ATP6V1C1-204ENST00000518959 HS6ST2Q96MM7 605 aa3.34□□□□□ -1.87
ATP6V1C1-204ENST00000518959 PRR25Q96S07 402 aa3.34□□□□□ -1.87
ATP6V1C1-204ENST00000518959 SEZ6LQ9BYH1 1024 aa3.34□□□□□ -1.87
ATP6V1C1-204ENST00000518959 KRTAP4-3Q9BYR4 195 aa3.34□□□□□ -1.87
ATP6V1C1-204ENST00000518959 VEZTQ9HBM0 779 aa3.34□□□□□ -1.87
ATP6V1C1-204ENST00000518959 LMBRD1Q9NUN5 540 aa3.34□□□□□ -1.87
ATP6V1C1-204ENST00000518959 COG5Q9UP83 839 aa3.34□□□□□ -1.87
ATP6V1C1-204ENST00000518959 PCDHA1Q9Y5I3 950 aa3.34□□□□□ -1.87
ATP6V1C1-204ENST00000518959 BRCA2P51587 3418 aa3.33□□□□□ -1.88
ATP6V1C1-204ENST00000518959 CASP8AP2Q9UKL3 1982 aa3.33□□□□□ -1.88
ATP6V1C1-204ENST00000518959 CHL1O00533 1208 aa3.33□□□□□ -1.88
ATP6V1C1-204ENST00000518959 CTIFO43310 598 aaKnown RBP3.33□□□□□ -1.88
ATP6V1C1-204ENST00000518959 DTNBO60941 627 aa3.33□□□□□ -1.88
ATP6V1C1-204ENST00000518959 VNN1O95497 513 aa3.33□□□□□ -1.88
ATP6V1C1-204ENST00000518959 ALADP13716 330 aa3.33□□□□□ -1.88
ATP6V1C1-204ENST00000518959 EIF2S2P20042 333 aaKnown RBP3.33□□□□□ -1.88
ATP6V1C1-204ENST00000518959 CCND1P24385 295 aa3.33□□□□□ -1.88
ATP6V1C1-204ENST00000518959 SUMO2P61956 95 aaKnown RBP3.33□□□□□ -1.88
ATP6V1C1-204ENST00000518959 YPEL5P62699 121 aa3.33□□□□□ -1.88
ATP6V1C1-204ENST00000518959 CCNA1P78396 465 aa3.33□□□□□ -1.88
ATP6V1C1-204ENST00000518959 NKX6-1P78426 367 aaPredicted RBP3.33□□□□□ -1.88
ATP6V1C1-204ENST00000518959 HSF1Q00613 529 aa3.33□□□□□ -1.88
ATP6V1C1-204ENST00000518959 PSG6Q00889 435 aa3.33□□□□□ -1.88
ATP6V1C1-204ENST00000518959 EXOSC9Q06265 439 aaKnown RBP3.33□□□□□ -1.88
ATP6V1C1-204ENST00000518959 AIMP1Q12904 312 aaKnown RBP3.33□□□□□ -1.88
ATP6V1C1-204ENST00000518959 UBE4AQ14139 1066 aa3.33□□□□□ -1.88
ATP6V1C1-204ENST00000518959 KEAP1Q14145 624 aa3.33□□□□□ -1.88
ATP6V1C1-204ENST00000518959 LARS2Q15031 903 aaKnown RBP3.33□□□□□ -1.88
ATP6V1C1-204ENST00000518959 CAVIN4Q5BKX8 364 aa3.33□□□□□ -1.88
ATP6V1C1-204ENST00000518959 TMEM240Q5SV17 173 aa3.33□□□□□ -1.88
ATP6V1C1-204ENST00000518959 DCDC5Q6ZRR9 648 aa3.33□□□□□ -1.88
ATP6V1C1-204ENST00000518959 RFX8Q6ZV50 586 aa3.33□□□□□ -1.88
ATP6V1C1-204ENST00000518959 CCAR1Q8IX12 1150 aaKnown RBP3.33□□□□□ -1.88
ATP6V1C1-204ENST00000518959 TMEM199Q8N511 208 aa3.33□□□□□ -1.88
ATP6V1C1-204ENST00000518959 PCSK9Q8NBP7 692 aaKnown RBP3.33□□□□□ -1.88
ATP6V1C1-204ENST00000518959 PRMT6Q96LA8 375 aaPredicted RBP3.33□□□□□ -1.88
ATP6V1C1-204ENST00000518959 MOGAT1Q96PD6 335 aa3.33□□□□□ -1.88
ATP6V1C1-204ENST00000518959 MYH16Q9H6N6 1097 aa3.33□□□□□ -1.88
ATP6V1C1-204ENST00000518959 DECR2Q9NUI1 292 aa3.33□□□□□ -1.88
ATP6V1C1-204ENST00000518959 PNPOQ9NVS9 261 aa3.33□□□□□ -1.88
ATP6V1C1-204ENST00000518959 NRBP1Q9UHY1 535 aa3.33□□□□□ -1.88
ATP6V1C1-204ENST00000518959 CPA4Q9UI42 421 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms