RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 RNF214Q8ND24 703 aa13.73□□□□□ -0.21
VEGFA-219ENST00000518824 CPLX3Q8WVH0 158 aa13.73□□□□□ -0.21
VEGFA-219ENST00000518824 TCEAL3Q969E4 200 aa13.73□□□□□ -0.21
VEGFA-219ENST00000518824 TTC17Q96AE7 1141 aa13.73□□□□□ -0.21
VEGFA-219ENST00000518824 RPRD1AQ96P16 312 aaPredicted RBP13.73□□□□□ -0.21
VEGFA-219ENST00000518824 XPO4Q9C0E2 1151 aaKnown RBP13.73□□□□□ -0.21
VEGFA-219ENST00000518824 SEMA4GQ9NTN9 838 aa13.73□□□□□ -0.21
VEGFA-219ENST00000518824 RRN3Q9NYV6 651 aa13.73□□□□□ -0.21
VEGFA-219ENST00000518824 MPP6Q9NZW5 540 aa13.73□□□□□ -0.21
VEGFA-219ENST00000518824 SLCO3A1Q9UIG8 710 aa13.73□□□□□ -0.21
VEGFA-219ENST00000518824 MYO6Q9UM54 1294 aa13.73□□□□□ -0.21
VEGFA-219ENST00000518824 NUMA1Q14980 2115 aa13.72□□□□□ -0.21
VEGFA-219ENST00000518824 A0A1B0GVM2 712 aa13.72□□□□□ -0.21
VEGFA-219ENST00000518824 TYW5A2RUC4 315 aaKnown RBP13.72□□□□□ -0.21
VEGFA-219ENST00000518824 TCAF2A6NFQ2 919 aa13.72□□□□□ -0.21
VEGFA-219ENST00000518824 TTC34A8MYJ7 566 aa13.72□□□□□ -0.21
VEGFA-219ENST00000518824 FAM72CH0Y354 149 aa13.72□□□□□ -0.21
VEGFA-219ENST00000518824 GDF9O60383 454 aa13.72□□□□□ -0.21
VEGFA-219ENST00000518824 PLEKP08567 350 aaPredicted RBP13.72□□□□□ -0.21
VEGFA-219ENST00000518824 KRT3P12035 628 aa13.72□□□□□ -0.21
VEGFA-219ENST00000518824 VAV1P15498 845 aa13.72□□□□□ -0.21
VEGFA-219ENST00000518824 RDXP35241 583 aaKnown RBP13.72□□□□□ -0.21
VEGFA-219ENST00000518824 PRKCIP41743 596 aa13.72□□□□□ -0.21
VEGFA-219ENST00000518824 HDAC4P56524 1084 aa13.72□□□□□ -0.21
VEGFA-219ENST00000518824 CAMK2GQ13555 558 aaPredicted RBP13.72□□□□□ -0.21
VEGFA-219ENST00000518824 C5orf22Q49AR2 442 aa13.72□□□□□ -0.21
VEGFA-219ENST00000518824 PPP1R15BQ5SWA1 713 aa13.72□□□□□ -0.21
VEGFA-219ENST00000518824 FAM72AQ5TYM5 149 aa13.72□□□□□ -0.21
VEGFA-219ENST00000518824 SFMBT2Q5VUG0 894 aa13.72□□□□□ -0.21
VEGFA-219ENST00000518824 HGSNATQ68CP4 663 aa13.72□□□□□ -0.21
VEGFA-219ENST00000518824 FAM72DQ6L9T8 149 aa13.72□□□□□ -0.21
VEGFA-219ENST00000518824 ARCQ7LC44 396 aa13.72□□□□□ -0.21
VEGFA-219ENST00000518824 FAM72BQ86X60 149 aa13.72□□□□□ -0.21
VEGFA-219ENST00000518824 TMPRSS6Q8IU80 811 aa13.72□□□□□ -0.21
VEGFA-219ENST00000518824 CCDC185Q8N715 623 aa13.72□□□□□ -0.21
VEGFA-219ENST00000518824 C3orf20Q8ND61 904 aa13.72□□□□□ -0.21
VEGFA-219ENST00000518824 RMDN1Q96DB5 314 aa13.72□□□□□ -0.21
VEGFA-219ENST00000518824 RPL10LQ96L21 214 aaKnown RBP13.72□□□□□ -0.21
VEGFA-219ENST00000518824 SELENOOQ9BVL4 669 aa13.72□□□□□ -0.21
VEGFA-219ENST00000518824 PRSS16Q9NQE7 514 aa13.72□□□□□ -0.21
VEGFA-219ENST00000518824 KIAA1522Q9P206 1035 aaPredicted RBP13.72□□□□□ -0.21
VEGFA-219ENST00000518824 ERVW-1Q9UQF0 538 aa13.72□□□□□ -0.21
VEGFA-219ENST00000518824 OR51B4Q9Y5P0 310 aa13.72□□□□□ -0.21
VEGFA-219ENST00000518824 GON4LQ3T8J9 2241 aa13.72□□□□□ -0.21
VEGFA-219ENST00000518824 NYNRINQ9P2P1 1898 aaKnown RBP13.72□□□□□ -0.21
VEGFA-219ENST00000518824 ATXN2Q99700 1313 aaKnown RBP13.71□□□□□ -0.21
VEGFA-219ENST00000518824 SIGLEC16A6NMB1 481 aa13.71□□□□□ -0.21
VEGFA-219ENST00000518824 PATE3B3GLJ2 98 aa13.71□□□□□ -0.21
VEGFA-219ENST00000518824 NPC1O15118 1278 aa13.71□□□□□ -0.21
VEGFA-219ENST00000518824 CCP110O43303 1012 aa13.71□□□□□ -0.21
VEGFA-219ENST00000518824 F9P00740 461 aa13.71□□□□□ -0.21
VEGFA-219ENST00000518824 GYPCP04921 128 aa13.71□□□□□ -0.21
VEGFA-219ENST00000518824 CALB1P05937 261 aa13.71□□□□□ -0.21
VEGFA-219ENST00000518824 GPD1P21695 349 aa13.71□□□□□ -0.21
VEGFA-219ENST00000518824 SDC4P31431 198 aa13.71□□□□□ -0.21
VEGFA-219ENST00000518824 MPLP40238 635 aa13.71□□□□□ -0.21
VEGFA-219ENST00000518824 DHPSP49366 369 aaPredicted RBP13.71□□□□□ -0.21
VEGFA-219ENST00000518824 CREB5Q02930 508 aa13.71□□□□□ -0.21
VEGFA-219ENST00000518824 C1QBPQ07021 282 aaKnown RBP13.71□□□□□ -0.21
VEGFA-219ENST00000518824 KLHL30Q0D2K2 578 aa13.71□□□□□ -0.21
VEGFA-219ENST00000518824 STARD3Q14849 445 aa13.71□□□□□ -0.21
VEGFA-219ENST00000518824 FIGNQ5HY92 759 aa13.71□□□□□ -0.21
VEGFA-219ENST00000518824 RABGAP1LQ5R372 815 aa13.71□□□□□ -0.21
VEGFA-219ENST00000518824 PLA2G2CQ5R387 149 aa13.71□□□□□ -0.21
VEGFA-219ENST00000518824 LRSAM1Q6UWE0 723 aa13.71□□□□□ -0.21
VEGFA-219ENST00000518824 SND1Q7KZF4 910 aaKnown RBP eCLIP13.71□□□□□ -0.214e-9■■□□□ 11.9
VEGFA-219ENST00000518824 SLC41A1Q8IVJ1 513 aa13.71□□□□□ -0.21
VEGFA-219ENST00000518824 FAM172AQ8WUF8 416 aa13.71□□□□□ -0.21
VEGFA-219ENST00000518824 CENPIQ92674 756 aaPredicted RBP13.71□□□□□ -0.21
VEGFA-219ENST00000518824 MCEEQ96PE7 176 aa13.71□□□□□ -0.21
VEGFA-219ENST00000518824 TRIM7Q9C029 511 aa13.71□□□□□ -0.21
VEGFA-219ENST00000518824 TSPY26PQ9H489 355 aa13.71□□□□□ -0.21
VEGFA-219ENST00000518824 PRDM16Q9HAZ2 1276 aa13.71□□□□□ -0.21
VEGFA-219ENST00000518824 TMEM74BQ9NUR3 256 aa13.71□□□□□ -0.21
VEGFA-219ENST00000518824 ZNF212Q9UDV6 495 aa13.71□□□□□ -0.21
VEGFA-219ENST00000518824 PLA2G4CQ9UP65 541 aa13.71□□□□□ -0.21
VEGFA-219ENST00000518824 DMXL1Q9Y485 3027 aa13.7□□□□□ -0.22
VEGFA-219ENST00000518824 IGLV3-10A0A075B6K4 115 aa13.7□□□□□ -0.22
VEGFA-219ENST00000518824 BCLAF3A2AJT9 711 aaKnown RBP13.7□□□□□ -0.22
VEGFA-219ENST00000518824 DRGXA6NNA5 263 aa13.7□□□□□ -0.22
VEGFA-219ENST00000518824 E9PAM4 449 aa13.7□□□□□ -0.22
VEGFA-219ENST00000518824 AP5Z1O43299 807 aa13.7□□□□□ -0.22
VEGFA-219ENST00000518824 SYNCRIPO60506 623 aaKnown RBP13.7□□□□□ -0.22
VEGFA-219ENST00000518824 SRGAP2O75044 1071 aa13.7□□□□□ -0.22
VEGFA-219ENST00000518824 SIN3BO75182 1162 aa13.7□□□□□ -0.22
VEGFA-219ENST00000518824 RHOBTB1O94844 696 aa13.7□□□□□ -0.22
VEGFA-219ENST00000518824 ATP5BP06576 529 aaKnown RBP13.7□□□□□ -0.22
VEGFA-219ENST00000518824 PTPN9P43378 593 aa13.7□□□□□ -0.22
VEGFA-219ENST00000518824 TPM4P67936 248 aa13.7□□□□□ -0.22
VEGFA-219ENST00000518824 ELF2Q15723 593 aa13.7□□□□□ -0.22
VEGFA-219ENST00000518824 CSRP2Q16527 193 aa13.7□□□□□ -0.22
VEGFA-219ENST00000518824 RNF219Q5W0B1 726 aaPredicted RBP13.7□□□□□ -0.22
VEGFA-219ENST00000518824 DNAJC24Q6P3W2 148 aa13.7□□□□□ -0.22
VEGFA-219ENST00000518824 PRR23CQ6ZRP0 262 aa13.7□□□□□ -0.22
VEGFA-219ENST00000518824 TFAP2DQ7Z6R9 452 aa13.7□□□□□ -0.22
VEGFA-219ENST00000518824 PYROXD2Q8N2H3 581 aa13.7□□□□□ -0.22
VEGFA-219ENST00000518824 OR2T3Q8NH03 318 aa13.7□□□□□ -0.22
VEGFA-219ENST00000518824 SIPA1Q96FS4 1042 aa13.7□□□□□ -0.22
VEGFA-219ENST00000518824 LOXL4Q96JB6 756 aa13.7□□□□□ -0.22
VEGFA-219ENST00000518824 PSMB7Q99436 277 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms