RNA–Protein interactions for RNA: ENST00000517545.5

PCM1-203, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 3,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-203ENST00000517545 PPP2R5DQ14738 602 aa12.66□□□□□ -0.38
PCM1-203ENST00000517545 TARBP2Q15633 366 aaKnown RBP12.66□□□□□ -0.38
PCM1-203ENST00000517545 ACBD5Q5T8D3 534 aaPredicted RBP12.66□□□□□ -0.38
PCM1-203ENST00000517545 DCLK2Q8N568 766 aa12.66□□□□□ -0.38
PCM1-203ENST00000517545 ADCY4Q8NFM4 1077 aa12.66□□□□□ -0.38
PCM1-203ENST00000517545 CNKSR2Q8WXI2 1034 aa12.66□□□□□ -0.38
PCM1-203ENST00000517545 LGMNQ99538 433 aa12.66□□□□□ -0.38
PCM1-203ENST00000517545 TIMMDC1Q9NPL8 285 aa12.66□□□□□ -0.38
PCM1-203ENST00000517545 PRPF19Q9UMS4 504 aaKnown RBP12.66□□□□□ -0.38
PCM1-203ENST00000517545 RGSL1A5PLK6 1076 aa12.66□□□□□ -0.38
PCM1-203ENST00000517545 G3V2L1 256 aa12.66□□□□□ -0.38
PCM1-203ENST00000517545 RNASEH2AO75792 299 aaKnown RBP12.66□□□□□ -0.38
PCM1-203ENST00000517545 PFKMP08237 780 aa12.66□□□□□ -0.38
PCM1-203ENST00000517545 THRAP10827 490 aa12.66□□□□□ -0.38
PCM1-203ENST00000517545 PGGT1BP53609 377 aa12.66□□□□□ -0.38
PCM1-203ENST00000517545 PPIDQ08752 370 aaKnown RBP12.66□□□□□ -0.38
PCM1-203ENST00000517545 LSM12Q3MHD2 195 aaKnown RBP12.66□□□□□ -0.38
PCM1-203ENST00000517545 HEATR6Q6AI08 1181 aaKnown RBP12.66□□□□□ -0.38
PCM1-203ENST00000517545 CYS1Q717R9 158 aa12.66□□□□□ -0.38
PCM1-203ENST00000517545 SCUBE3Q8IX30 993 aa12.66□□□□□ -0.38
PCM1-203ENST00000517545 ZSCAN18Q8TBC5 510 aaPredicted RBP12.66□□□□□ -0.38
PCM1-203ENST00000517545 SERPINI1Q99574 410 aa12.66□□□□□ -0.38
PCM1-203ENST00000517545 FERMT1Q9BQL6 677 aa12.66□□□□□ -0.38
PCM1-203ENST00000517545 B3GNT5Q9BYG0 378 aa12.66□□□□□ -0.38
PCM1-203ENST00000517545 GCOM2Q9BZD3 368 aaPredicted RBP12.66□□□□□ -0.38
PCM1-203ENST00000517545 PDGFDQ9GZP0 370 aaPredicted RBP12.66□□□□□ -0.38
PCM1-203ENST00000517545 DHX35Q9H5Z1 703 aaKnown RBP12.66□□□□□ -0.38
PCM1-203ENST00000517545 TXNDC16Q9P2K2 825 aa12.66□□□□□ -0.38
PCM1-203ENST00000517545 TSPAN16Q9UKR8 245 aa12.66□□□□□ -0.38
PCM1-203ENST00000517545 B4GALT4O60513 344 aa12.65□□□□□ -0.38
PCM1-203ENST00000517545 TPP2P29144 1249 aaPredicted RBP12.65□□□□□ -0.38
PCM1-203ENST00000517545 NUMBP49757 651 aa12.65□□□□□ -0.38
PCM1-203ENST00000517545 NR1H2P55055 460 aa12.65□□□□□ -0.38
PCM1-203ENST00000517545 LAMTOR4Q0VGL1 99 aa12.65□□□□□ -0.38
PCM1-203ENST00000517545 INSCQ1MX18 579 aa12.65□□□□□ -0.38
PCM1-203ENST00000517545 TMEM132AQ24JP5 1023 aa12.65□□□□□ -0.38
PCM1-203ENST00000517545 USP41Q3LFD5 358 aa12.65□□□□□ -0.38
PCM1-203ENST00000517545 SH3D19Q5HYK7 790 aa12.65□□□□□ -0.38
PCM1-203ENST00000517545 C16orf89Q6UX73 402 aa12.65□□□□□ -0.38
PCM1-203ENST00000517545 NUP93Q8N1F7 819 aa12.65□□□□□ -0.38
PCM1-203ENST00000517545 ZNF670Q9BS34 389 aa12.65□□□□□ -0.38
PCM1-203ENST00000517545 SLC2A11Q9BYW1 496 aa12.65□□□□□ -0.38
PCM1-203ENST00000517545 SEMA6AQ9H2E6 1030 aa12.65□□□□□ -0.38
PCM1-203ENST00000517545 RNF11Q9Y3C5 154 aa12.65□□□□□ -0.38
PCM1-203ENST00000517545 PRSS51A0A1B0GVH4 220 aa12.65□□□□□ -0.38
PCM1-203ENST00000517545 C7orf72A4D263 438 aa12.65□□□□□ -0.38
PCM1-203ENST00000517545 ATP6V1G1O75348 118 aa12.65□□□□□ -0.38
PCM1-203ENST00000517545 SERPINB8P50452 374 aa12.65□□□□□ -0.38
PCM1-203ENST00000517545 STYK1Q6J9G0 422 aa12.65□□□□□ -0.38
PCM1-203ENST00000517545 PMF1Q6P1K2 205 aa12.65□□□□□ -0.38
PCM1-203ENST00000517545 KLHL35Q6PF15 583 aa12.65□□□□□ -0.38
PCM1-203ENST00000517545 KHSRPQ92945 711 aaKnown RBP eCLIP12.65□□□□□ -0.383e-6■□□□□ 11.2
PCM1-203ENST00000517545 QKIQ96PU8 341 aaKnown RBP eCLIP12.65□□□□□ -0.38
PCM1-203ENST00000517545 SLC4A5Q9BY07 1137 aa12.65□□□□□ -0.38
PCM1-203ENST00000517545 NUF2Q9BZD4 464 aa12.65□□□□□ -0.38
PCM1-203ENST00000517545 GBA2Q9HCG7 927 aaPredicted RBP12.65□□□□□ -0.38
PCM1-203ENST00000517545 DTLQ9NZJ0 730 aa12.65□□□□□ -0.38
PCM1-203ENST00000517545 XPO1O14980 1071 aaKnown RBP12.65□□□□□ -0.39
PCM1-203ENST00000517545 JUNP05412 331 aaKnown RBP12.65□□□□□ -0.39
PCM1-203ENST00000517545 SDC4P31431 198 aa12.65□□□□□ -0.39
PCM1-203ENST00000517545 NDST1P52848 882 aa12.65□□□□□ -0.39
PCM1-203ENST00000517545 ITGA7Q13683 1181 aa12.65□□□□□ -0.39
PCM1-203ENST00000517545 SURF1Q15526 300 aa12.65□□□□□ -0.39
PCM1-203ENST00000517545 OLFML1Q6UWY5 402 aa12.65□□□□□ -0.39
PCM1-203ENST00000517545 TRIM67Q6ZTA4 783 aa12.65□□□□□ -0.39
PCM1-203ENST00000517545 FAM83AQ86UY5 434 aa12.65□□□□□ -0.39
PCM1-203ENST00000517545 TMEM102Q8N9M5 508 aaPredicted RBP12.65□□□□□ -0.39
PCM1-203ENST00000517545 COLGALT1Q8NBJ5 622 aa12.65□□□□□ -0.39
PCM1-203ENST00000517545 GATA5Q9BWX5 397 aaPredicted RBP12.65□□□□□ -0.39
PCM1-203ENST00000517545 TDRKHQ9Y2W6 561 aaKnown RBP12.65□□□□□ -0.39
PCM1-203ENST00000517545 MGAMO43451 1857 aa12.64□□□□□ -0.39
PCM1-203ENST00000517545 CSPG5O95196 566 aa12.64□□□□□ -0.39
PCM1-203ENST00000517545 HNRNPCP07910 306 aaKnown RBP eCLIP12.64□□□□□ -0.396e-6■■■■□ 19.3
PCM1-203ENST00000517545 PGAM1P18669 254 aa12.64□□□□□ -0.39
PCM1-203ENST00000517545 EFNA5P52803 228 aa12.64□□□□□ -0.39
PCM1-203ENST00000517545 ZFP1Q6P2D0 407 aa12.64□□□□□ -0.39
PCM1-203ENST00000517545 MPZL3Q6UWV2 235 aa12.64□□□□□ -0.39
PCM1-203ENST00000517545 ACVR1CQ8NER5 493 aa12.64□□□□□ -0.39
PCM1-203ENST00000517545 REPS2Q8NFH8 660 aa12.64□□□□□ -0.39
PCM1-203ENST00000517545 DDI1Q8WTU0 396 aa12.64□□□□□ -0.39
PCM1-203ENST00000517545 PDCD6IPQ8WUM4 868 aaKnown RBP12.64□□□□□ -0.39
PCM1-203ENST00000517545 NLRP7Q8WX94 980 aa12.64□□□□□ -0.39
PCM1-203ENST00000517545 FCRL3Q96P31 734 aaPredicted RBP12.64□□□□□ -0.39
PCM1-203ENST00000517545 AGAP2Q99490 1192 aa12.64□□□□□ -0.39
PCM1-203ENST00000517545 WDR41Q9HAD4 459 aa12.64□□□□□ -0.39
PCM1-203ENST00000517545 ZNF214Q9UL59 606 aaPredicted RBP12.64□□□□□ -0.39
PCM1-203ENST00000517545 PTPRFP10586 1907 aa12.64□□□□□ -0.39
PCM1-203ENST00000517545 GPR25O00155 361 aa12.64□□□□□ -0.39
PCM1-203ENST00000517545 MAFO75444 373 aaPredicted RBP12.64□□□□□ -0.39
PCM1-203ENST00000517545 VDRP11473 427 aa12.64□□□□□ -0.39
PCM1-203ENST00000517545 P4HA1P13674 534 aa12.64□□□□□ -0.39
PCM1-203ENST00000517545 ZNF26P17031 533 aaPredicted RBP12.64□□□□□ -0.39
PCM1-203ENST00000517545 FGFR3P22607 806 aa12.64□□□□□ -0.39
PCM1-203ENST00000517545 GP5P40197 560 aa12.64□□□□□ -0.39
PCM1-203ENST00000517545 STT3AP46977 705 aa12.64□□□□□ -0.39
PCM1-203ENST00000517545 TMEM132BQ14DG7 1078 aa12.64□□□□□ -0.39
PCM1-203ENST00000517545 IL23RQ5VWK5 629 aa12.64□□□□□ -0.39
PCM1-203ENST00000517545 METTL21CQ5VZV1 264 aa12.64□□□□□ -0.39
PCM1-203ENST00000517545 JADE1Q6IE81 842 aa12.64□□□□□ -0.39
PCM1-203ENST00000517545 BORAQ6PGQ7 559 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms