RNA–Protein interactions for RNA: ENST00000517256.1

SNORA40.17-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 115 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.17-201ENST00000517256 PALM2-AKAP2B1ALY0 433 aaPredicted RBP0.03□□□□□ -2.4
SNORA40.17-201ENST00000517256 SMIM1B2RUZ4 78 aa0.03□□□□□ -2.4
SNORA40.17-201ENST00000517256 HNRNPCL3B7ZW38 293 aa0.03□□□□□ -2.4
SNORA40.17-201ENST00000517256 ZEB2O60315 1214 aa0.03□□□□□ -2.4
SNORA40.17-201ENST00000517256 MARCH6O60337 910 aa0.03□□□□□ -2.4
SNORA40.17-201ENST00000517256 HNRNPCL1O60812 293 aaKnown RBP0.03□□□□□ -2.4
SNORA40.17-201ENST00000517256 KRT6AP02538 564 aa0.03□□□□□ -2.4
SNORA40.17-201ENST00000517256 KRT6BP04259 564 aa0.03□□□□□ -2.4
SNORA40.17-201ENST00000517256 IGKV4-1P06312 121 aa0.03□□□□□ -2.4
SNORA40.17-201ENST00000517256 PROS1P07225 676 aa0.03□□□□□ -2.4
SNORA40.17-201ENST00000517256 ITGA2BP08514 1039 aa0.03□□□□□ -2.4
SNORA40.17-201ENST00000517256 HNRNPCL4P0DMR1 293 aa0.03□□□□□ -2.4
SNORA40.17-201ENST00000517256 SLC5A1P13866 664 aa0.03□□□□□ -2.4
SNORA40.17-201ENST00000517256 HGFP14210 728 aa0.03□□□□□ -2.4
SNORA40.17-201ENST00000517256 FDPSP14324 419 aaKnown RBP0.03□□□□□ -2.4
SNORA40.17-201ENST00000517256 KCNA6P17658 529 aa0.03□□□□□ -2.4
SNORA40.17-201ENST00000517256 CHRNB2P17787 502 aa0.03□□□□□ -2.4
SNORA40.17-201ENST00000517256 UBA1P22314 1058 aaKnown RBP0.03□□□□□ -2.4
SNORA40.17-201ENST00000517256 HOXD12P35452 270 aa0.03□□□□□ -2.4
SNORA40.17-201ENST00000517256 IGFALSP35858 605 aa0.03□□□□□ -2.4
SNORA40.17-201ENST00000517256 MAP2K2P36507 400 aa0.03□□□□□ -2.4
SNORA40.17-201ENST00000517256 KRT6CP48668 564 aa0.03□□□□□ -2.4
SNORA40.17-201ENST00000517256 ZNF84P51523 738 aa0.03□□□□□ -2.4
SNORA40.17-201ENST00000517256 MECP2P51608 486 aaKnown RBP0.03□□□□□ -2.4
SNORA40.17-201ENST00000517256 WDR5P61964 334 aaKnown RBP0.03□□□□□ -2.4
SNORA40.17-201ENST00000517256 RACK1P63244 317 aaKnown RBP0.03□□□□□ -2.4
SNORA40.17-201ENST00000517256 CCDC15Q0P6D6 951 aa0.03□□□□□ -2.4
SNORA40.17-201ENST00000517256 RAB39AQ14964 217 aa0.03□□□□□ -2.4
SNORA40.17-201ENST00000517256 CLUL1Q15846 466 aa0.03□□□□□ -2.4
SNORA40.17-201ENST00000517256 ADRM1Q16186 407 aa0.03□□□□□ -2.4
SNORA40.17-201ENST00000517256 MTERF2Q49AM1 385 aa0.03□□□□□ -2.4
SNORA40.17-201ENST00000517256 DCST1Q5T197 706 aa0.03□□□□□ -2.4
SNORA40.17-201ENST00000517256 PDSS1Q5T2R2 415 aa0.03□□□□□ -2.4
SNORA40.17-201ENST00000517256 LDLRAD1Q5T700 205 aa0.03□□□□□ -2.4
SNORA40.17-201ENST00000517256 FAM160B1Q5W0V3 765 aa0.03□□□□□ -2.4
SNORA40.17-201ENST00000517256 FGD2Q7Z6J4 655 aa0.03□□□□□ -2.4
SNORA40.17-201ENST00000517256 ADCK1Q86TW2 530 aa0.03□□□□□ -2.4
SNORA40.17-201ENST00000517256 OAFQ86UD1 273 aa0.03□□□□□ -2.4
SNORA40.17-201ENST00000517256 VPS37DQ86XT2 251 aa0.03□□□□□ -2.4
SNORA40.17-201ENST00000517256 GPSM1Q86YR5 675 aa0.03□□□□□ -2.4
SNORA40.17-201ENST00000517256 SPARTQ8N0X7 666 aa0.03□□□□□ -2.4
SNORA40.17-201ENST00000517256 ABRAQ8N0Z2 381 aa0.03□□□□□ -2.4
SNORA40.17-201ENST00000517256 STPG4Q8N801 248 aa0.03□□□□□ -2.4
SNORA40.17-201ENST00000517256 ARL14EPQ8N8R7 260 aaPredicted RBP0.03□□□□□ -2.4
SNORA40.17-201ENST00000517256 DCBLD1Q8N8Z6 715 aa0.03□□□□□ -2.4
SNORA40.17-201ENST00000517256 FAM47BQ8NA70 645 aa0.03□□□□□ -2.4
SNORA40.17-201ENST00000517256 SLC24A4Q8NFF2 622 aa0.03□□□□□ -2.4
SNORA40.17-201ENST00000517256 ST13P5Q8NFI4 369 aaPredicted RBP0.03□□□□□ -2.4
SNORA40.17-201ENST00000517256 DDX55Q8NHQ9 600 aaKnown RBP eCLIP0.03□□□□□ -2.4
SNORA40.17-201ENST00000517256 SSC4DQ8WTU2 575 aa0.03□□□□□ -2.4
SNORA40.17-201ENST00000517256 TM9SF4Q92544 642 aa0.03□□□□□ -2.4
SNORA40.17-201ENST00000517256 STARD4Q96DR4 205 aa0.03□□□□□ -2.4
SNORA40.17-201ENST00000517256 ALG14Q96F25 216 aa0.03□□□□□ -2.4
SNORA40.17-201ENST00000517256 STAMBPL1Q96FJ0 436 aa0.03□□□□□ -2.4
SNORA40.17-201ENST00000517256 C17orf77Q96MU5 243 aa0.03□□□□□ -2.4
SNORA40.17-201ENST00000517256 GPR101Q96P66 508 aaPredicted RBP0.03□□□□□ -2.4
SNORA40.17-201ENST00000517256 MAP3K14Q99558 947 aa0.03□□□□□ -2.4
SNORA40.17-201ENST00000517256 SENP7Q9BQF6 1050 aa0.03□□□□□ -2.4
SNORA40.17-201ENST00000517256 QRSL1Q9H0R6 528 aaKnown RBP0.03□□□□□ -2.4
SNORA40.17-201ENST00000517256 WNT5BQ9H1J7 359 aa0.03□□□□□ -2.4
SNORA40.17-201ENST00000517256 MAGEH1Q9H213 219 aa0.03□□□□□ -2.4
SNORA40.17-201ENST00000517256 EPS8L2Q9H6S3 715 aa0.03□□□□□ -2.4
SNORA40.17-201ENST00000517256 IFT122Q9HBG6 1241 aa0.03□□□□□ -2.4
SNORA40.17-201ENST00000517256 SLC52A3Q9NQ40 469 aa0.03□□□□□ -2.4
SNORA40.17-201ENST00000517256 ASNSD1Q9NWL6 643 aa0.03□□□□□ -2.4
SNORA40.17-201ENST00000517256 BARHL2Q9NY43 387 aa0.03□□□□□ -2.4
SNORA40.17-201ENST00000517256 ADAM22Q9P0K1 906 aa0.03□□□□□ -2.4
SNORA40.17-201ENST00000517256 TMPRSS11EQ9UL52 423 aa0.03□□□□□ -2.4
SNORA40.17-201ENST00000517256 INPP5FQ9Y2H2 1132 aa0.03□□□□□ -2.4
SNORA40.17-201ENST00000517256 SNX14Q9Y5W7 946 aa0.03□□□□□ -2.4
SNORA40.17-201ENST00000517256 C1orf226A1L170 272 aa0.02□□□□□ -2.41
SNORA40.17-201ENST00000517256 KDM4EB2RXH2 506 aaPredicted RBP0.02□□□□□ -2.41
SNORA40.17-201ENST00000517256 STMND1H3BQB6 276 aa0.02□□□□□ -2.41
SNORA40.17-201ENST00000517256 MYO1CO00159 1063 aa0.02□□□□□ -2.41
SNORA40.17-201ENST00000517256 RASA4O43374 803 aa0.02□□□□□ -2.41
SNORA40.17-201ENST00000517256 KCNQ2O43526 872 aa0.02□□□□□ -2.41
SNORA40.17-201ENST00000517256 KDM4BO94953 1096 aa0.02□□□□□ -2.41
SNORA40.17-201ENST00000517256 MELTFP08582 738 aa0.02□□□□□ -2.41
SNORA40.17-201ENST00000517256 JMJD7P0C870 316 aa0.02□□□□□ -2.41
SNORA40.17-201ENST00000517256 MTHFD2P13995 350 aa0.02□□□□□ -2.41
SNORA40.17-201ENST00000517256 ATP2A2P16615 1042 aaKnown RBP0.02□□□□□ -2.41
SNORA40.17-201ENST00000517256 ATF7P17544 494 aaPredicted RBP0.02□□□□□ -2.41
SNORA40.17-201ENST00000517256 LRPAP1P30533 357 aa0.02□□□□□ -2.41
SNORA40.17-201ENST00000517256 ALDH1B1P30837 517 aa0.02□□□□□ -2.41
SNORA40.17-201ENST00000517256 METAP2P50579 478 aaKnown RBP eCLIP0.02□□□□□ -2.41
SNORA40.17-201ENST00000517256 SELENOVP59797 346 aa0.02□□□□□ -2.41
SNORA40.17-201ENST00000517256 SNRPD1P62314 119 aaKnown RBP0.02□□□□□ -2.41
SNORA40.17-201ENST00000517256 GNB1P62873 340 aa0.02□□□□□ -2.41
SNORA40.17-201ENST00000517256 BNC1Q01954 994 aa0.02□□□□□ -2.41
SNORA40.17-201ENST00000517256 OCRLQ01968 901 aa0.02□□□□□ -2.41
SNORA40.17-201ENST00000517256 CKAP4Q07065 602 aaKnown RBP0.02□□□□□ -2.41
SNORA40.17-201ENST00000517256 ZBTB17Q13105 803 aa0.02□□□□□ -2.41
SNORA40.17-201ENST00000517256 HNF4GQ14541 408 aa0.02□□□□□ -2.41
SNORA40.17-201ENST00000517256 PGM5Q15124 567 aa0.02□□□□□ -2.41
SNORA40.17-201ENST00000517256 C15orf32Q32M92 178 aa0.02□□□□□ -2.41
SNORA40.17-201ENST00000517256 CFAP100Q494V2 611 aa0.02□□□□□ -2.41
SNORA40.17-201ENST00000517256 TPRNQ4KMQ1 711 aa0.02□□□□□ -2.41
SNORA40.17-201ENST00000517256 ZNF326Q5BKZ1 582 aaKnown RBP0.02□□□□□ -2.41
SNORA40.17-201ENST00000517256 SLC27A1Q6PCB7 646 aa0.02□□□□□ -2.41
SNORA40.17-201ENST00000517256 GPRIN3Q6ZVF9 776 aa0.02□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms