RNA–Protein interactions for RNA: ENST00000516768.1

SCARNA20-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20-201ENST00000516768 IL12RB1P42701 662 aa11.49□□□□□ -0.57
SCARNA20-201ENST00000516768 OGDHQ02218 1023 aa11.49□□□□□ -0.57
SCARNA20-201ENST00000516768 NRG1Q02297 640 aaPredicted RBP11.49□□□□□ -0.57
SCARNA20-201ENST00000516768 MAPK8IP2Q13387 824 aaPredicted RBP11.49□□□□□ -0.57
SCARNA20-201ENST00000516768 PTPRNQ16849 979 aa11.49□□□□□ -0.57
SCARNA20-201ENST00000516768 PLEKHG6Q3KR16 790 aa11.49□□□□□ -0.57
SCARNA20-201ENST00000516768 FUT11Q495W5 492 aa11.49□□□□□ -0.57
SCARNA20-201ENST00000516768 USP39Q53GS9 565 aaKnown RBP11.49□□□□□ -0.57
SCARNA20-201ENST00000516768 PITRM1Q5JRX3 1037 aa11.49□□□□□ -0.57
SCARNA20-201ENST00000516768 CCDC122Q5T0U0 273 aa11.49□□□□□ -0.57
SCARNA20-201ENST00000516768 CXorf57Q6NSI4 855 aaKnown RBP11.49□□□□□ -0.57
SCARNA20-201ENST00000516768 KIAA1211LQ6NV74 962 aa11.49□□□□□ -0.57
SCARNA20-201ENST00000516768 ASCL5Q7RTU5 278 aa11.49□□□□□ -0.57
SCARNA20-201ENST00000516768 SLFN11Q7Z7L1 901 aa11.49□□□□□ -0.57
SCARNA20-201ENST00000516768 ALYREFQ86V81 257 aaKnown RBP11.49□□□□□ -0.57
SCARNA20-201ENST00000516768 CIR1Q86X95 450 aaPredicted RBP11.49□□□□□ -0.57
SCARNA20-201ENST00000516768 APCDD1Q8J025 514 aa11.49□□□□□ -0.57
SCARNA20-201ENST00000516768 ARFGAP1Q8N6T3 406 aa11.49□□□□□ -0.57
SCARNA20-201ENST00000516768 KDM1BQ8NB78 822 aa11.49□□□□□ -0.57
SCARNA20-201ENST00000516768 MDGA1Q8NFP4 955 aa11.49□□□□□ -0.57
SCARNA20-201ENST00000516768 FNIP1Q8TF40 1166 aa11.49□□□□□ -0.57
SCARNA20-201ENST00000516768 GAB3Q8WWW8 586 aa11.49□□□□□ -0.57
SCARNA20-201ENST00000516768 NTAN1Q96AB6 310 aa11.49□□□□□ -0.57
SCARNA20-201ENST00000516768 ALG14Q96F25 216 aa11.49□□□□□ -0.57
SCARNA20-201ENST00000516768 FEM1AQ9BSK4 669 aa11.49□□□□□ -0.57
SCARNA20-201ENST00000516768 MAGEB5Q9BZ81 275 aa11.49□□□□□ -0.57
SCARNA20-201ENST00000516768 RETREG1Q9H6L5 497 aa11.49□□□□□ -0.57
SCARNA20-201ENST00000516768 ABHD10Q9NUJ1 306 aa11.49□□□□□ -0.57
SCARNA20-201ENST00000516768 ZNHIT6Q9NWK9 470 aaKnown RBP11.49□□□□□ -0.57
SCARNA20-201ENST00000516768 PPARGC1AQ9UBK2 798 aaKnown RBP11.49□□□□□ -0.57
SCARNA20-201ENST00000516768 SNX10Q9Y5X0 201 aa11.49□□□□□ -0.57
SCARNA20-201ENST00000516768 KIAA1549LQ6ZVL6 1849 aa11.49□□□□□ -0.57
SCARNA20-201ENST00000516768 VPS13AQ96RL7 3174 aa11.49□□□□□ -0.57
SCARNA20-201ENST00000516768 ZFHX2Q9C0A1 2572 aaPredicted RBP11.48□□□□□ -0.57
SCARNA20-201ENST00000516768 TCRBV21S2A2A0A5A6 115 aa11.48□□□□□ -0.57
SCARNA20-201ENST00000516768 PRR23AA6NEV1 266 aa11.48□□□□□ -0.57
SCARNA20-201ENST00000516768 AKR1B15C9JRZ8 316 aaPredicted RBP11.48□□□□□ -0.57
SCARNA20-201ENST00000516768 ZBTB24O43167 697 aaPredicted RBP11.48□□□□□ -0.57
SCARNA20-201ENST00000516768 CCP110O43303 1012 aa11.48□□□□□ -0.57
SCARNA20-201ENST00000516768 ATMINO43313 823 aaPredicted RBP11.48□□□□□ -0.57
SCARNA20-201ENST00000516768 MFAP3LO75121 409 aa11.48□□□□□ -0.57
SCARNA20-201ENST00000516768 RPP40O75818 363 aaKnown RBP11.48□□□□□ -0.57
SCARNA20-201ENST00000516768 ASLP04424 464 aa11.48□□□□□ -0.57
SCARNA20-201ENST00000516768 DESP17661 470 aa11.48□□□□□ -0.57
SCARNA20-201ENST00000516768 GABRG2P18507 467 aa11.48□□□□□ -0.57
SCARNA20-201ENST00000516768 MZF1P28698 734 aaPredicted RBP11.48□□□□□ -0.57
SCARNA20-201ENST00000516768 HOXD11P31277 338 aaPredicted RBP11.48□□□□□ -0.57
SCARNA20-201ENST00000516768 CSKP41240 450 aa11.48□□□□□ -0.57
SCARNA20-201ENST00000516768 IRAK1P51617 712 aa11.48□□□□□ -0.57
SCARNA20-201ENST00000516768 AIF1P55008 147 aa11.48□□□□□ -0.57
SCARNA20-201ENST00000516768 ECT2LQ008S8 904 aa11.48□□□□□ -0.57
SCARNA20-201ENST00000516768 SCAPQ12770 1279 aa11.48□□□□□ -0.57
SCARNA20-201ENST00000516768 SRSF5Q13243 272 aaKnown RBP11.48□□□□□ -0.57
SCARNA20-201ENST00000516768 SIM2Q14190 667 aaPredicted RBP11.48□□□□□ -0.57
SCARNA20-201ENST00000516768 ACAP1Q15027 740 aa11.48□□□□□ -0.57
SCARNA20-201ENST00000516768 SLC18A3Q16572 532 aa11.48□□□□□ -0.57
SCARNA20-201ENST00000516768 ALFQ53S48 1182 aa11.48□□□□□ -0.57
SCARNA20-201ENST00000516768 ANO7Q6IWH7 933 aa11.48□□□□□ -0.57
SCARNA20-201ENST00000516768 SCYL2Q6P3W7 929 aa11.48□□□□□ -0.57
SCARNA20-201ENST00000516768 TMC6Q7Z403 805 aa11.48□□□□□ -0.57
SCARNA20-201ENST00000516768 SETD3Q86TU7 594 aaPredicted RBP11.48□□□□□ -0.57
SCARNA20-201ENST00000516768 CNGA4Q8IV77 575 aa11.48□□□□□ -0.57
SCARNA20-201ENST00000516768 CCDC185Q8N715 623 aa11.48□□□□□ -0.57
SCARNA20-201ENST00000516768 OR52K2Q8NGK3 314 aa11.48□□□□□ -0.57
SCARNA20-201ENST00000516768 CYB5D2Q8WUJ1 264 aa11.48□□□□□ -0.57
SCARNA20-201ENST00000516768 HMGB4Q8WW32 186 aa11.48□□□□□ -0.57
SCARNA20-201ENST00000516768 ZNF653Q96CK0 615 aa11.48□□□□□ -0.57
SCARNA20-201ENST00000516768 MYO19Q96H55 970 aa11.48□□□□□ -0.57
SCARNA20-201ENST00000516768 MRFAP1L1Q96HT8 127 aa11.48□□□□□ -0.57
SCARNA20-201ENST00000516768 ZC3H10Q96K80 434 aaKnown RBP11.48□□□□□ -0.57
SCARNA20-201ENST00000516768 CHP1Q99653 195 aa11.48□□□□□ -0.57
SCARNA20-201ENST00000516768 THAP2Q9H0W7 228 aa11.48□□□□□ -0.57
SCARNA20-201ENST00000516768 MPP6Q9NZW5 540 aa11.48□□□□□ -0.57
SCARNA20-201ENST00000516768 MYO1AQ9UBC5 1043 aa11.48□□□□□ -0.57
SCARNA20-201ENST00000516768 SUN2Q9UH99 717 aa11.48□□□□□ -0.57
SCARNA20-201ENST00000516768 NENFQ9UMX5 172 aa11.48□□□□□ -0.57
SCARNA20-201ENST00000516768 OR51B4Q9Y5P0 310 aa11.48□□□□□ -0.57
SCARNA20-201ENST00000516768 SCINQ9Y6U3 715 aa11.48□□□□□ -0.57
SCARNA20-201ENST00000516768 FANCMQ8IYD8 2048 aa11.48□□□□□ -0.57
SCARNA20-201ENST00000516768 FAM72CH0Y354 149 aa11.47□□□□□ -0.57
SCARNA20-201ENST00000516768 SYNCRIPO60506 623 aaKnown RBP11.47□□□□□ -0.57
SCARNA20-201ENST00000516768 RNF8O76064 485 aa11.47□□□□□ -0.57
SCARNA20-201ENST00000516768 CYP1A2P05177 515 aa11.47□□□□□ -0.57
SCARNA20-201ENST00000516768 EPHX1P07099 455 aa11.47□□□□□ -0.57
SCARNA20-201ENST00000516768 SRPRAP08240 638 aaKnown RBP11.47□□□□□ -0.57
SCARNA20-201ENST00000516768 C7P10643 843 aa11.47□□□□□ -0.57
SCARNA20-201ENST00000516768 PSMA2P25787 234 aa11.47□□□□□ -0.57
SCARNA20-201ENST00000516768 OR1E1P30953 314 aa11.47□□□□□ -0.57
SCARNA20-201ENST00000516768 L1CAMP32004 1257 aa11.47□□□□□ -0.57
SCARNA20-201ENST00000516768 VASPP50552 380 aaPredicted RBP11.47□□□□□ -0.57
SCARNA20-201ENST00000516768 ZNF75DP51815 510 aa11.47□□□□□ -0.57
SCARNA20-201ENST00000516768 GALCP54803 685 aa11.47□□□□□ -0.57
SCARNA20-201ENST00000516768 GFPT1Q06210 699 aaPredicted RBP11.47□□□□□ -0.57
SCARNA20-201ENST00000516768 SULT2A1Q06520 285 aa11.47□□□□□ -0.57
SCARNA20-201ENST00000516768 ZNF252P-AS1Q0IIN9 211 aa11.47□□□□□ -0.57
SCARNA20-201ENST00000516768 CAMK2GQ13555 558 aaPredicted RBP11.47□□□□□ -0.57
SCARNA20-201ENST00000516768 FAM72AQ5TYM5 149 aa11.47□□□□□ -0.57
SCARNA20-201ENST00000516768 MANEALQ5VSG8 457 aa11.47□□□□□ -0.57
SCARNA20-201ENST00000516768 FAM72DQ6L9T8 149 aa11.47□□□□□ -0.57
SCARNA20-201ENST00000516768 SERPINA13PQ6UXR4 307 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms