RNA–Protein interactions for RNA: ENST00000515682.5

SH3TC1-225, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 2

Gene SH3TC1, Length 4,293 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-225ENST00000515682 VSIG10LQ86VR7 867 aa13.9□□□□□ -0.18
SH3TC1-225ENST00000515682 APBB2Q92870 758 aa13.9□□□□□ -0.18
SH3TC1-225ENST00000515682 TMEM176AQ96HP8 235 aa13.9□□□□□ -0.18
SH3TC1-225ENST00000515682 NT5C1AQ9BXI3 368 aa13.9□□□□□ -0.18
SH3TC1-225ENST00000515682 XPNPEP1Q9NQW7 623 aa13.9□□□□□ -0.18
SH3TC1-225ENST00000515682 LMCD1Q9NZU5 365 aa13.9□□□□□ -0.18
SH3TC1-225ENST00000515682 AP4E1Q9UPM8 1137 aa13.9□□□□□ -0.18
SH3TC1-225ENST00000515682 PIN4Q9Y237 131 aaKnown RBP13.9□□□□□ -0.18
SH3TC1-225ENST00000515682 SPDYE16A6NNV3 312 aaPredicted RBP13.9□□□□□ -0.18
SH3TC1-225ENST00000515682 SRP72O76094 671 aaKnown RBP13.9□□□□□ -0.18
SH3TC1-225ENST00000515682 ATP5BP06576 529 aaKnown RBP13.9□□□□□ -0.18
SH3TC1-225ENST00000515682 PTGER2P43116 358 aa13.9□□□□□ -0.18
SH3TC1-225ENST00000515682 XIAPP98170 497 aa13.9□□□□□ -0.18
SH3TC1-225ENST00000515682 ANO4Q32M45 955 aa13.9□□□□□ -0.18
SH3TC1-225ENST00000515682 RWDD4Q6NW29 188 aaKnown RBP13.9□□□□□ -0.18
SH3TC1-225ENST00000515682 MPP5Q8N3R9 675 aa13.9□□□□□ -0.18
SH3TC1-225ENST00000515682 AFG1LQ8WV93 481 aa13.9□□□□□ -0.18
SH3TC1-225ENST00000515682 NPAS2Q99743 824 aa13.9□□□□□ -0.18
SH3TC1-225ENST00000515682 ST6GALNAC4Q9H4F1 302 aa13.9□□□□□ -0.18
SH3TC1-225ENST00000515682 PLCH1Q4KWH8 1693 aa13.9□□□□□ -0.18
SH3TC1-225ENST00000515682 ERBB2P04626 1255 aa13.9□□□□□ -0.18
SH3TC1-225ENST00000515682 NOVP48745 357 aa13.9□□□□□ -0.18
SH3TC1-225ENST00000515682 PCYT1AP49585 367 aa13.9□□□□□ -0.18
SH3TC1-225ENST00000515682 CLCN3P51790 818 aa13.9□□□□□ -0.18
SH3TC1-225ENST00000515682 SLC18A2Q05940 514 aa13.9□□□□□ -0.18
SH3TC1-225ENST00000515682 MPP3Q13368 585 aa13.9□□□□□ -0.18
SH3TC1-225ENST00000515682 METTL7BQ6UX53 244 aa13.9□□□□□ -0.18
SH3TC1-225ENST00000515682 PACS1Q6VY07 963 aa13.9□□□□□ -0.18
SH3TC1-225ENST00000515682 DDIASQ8IXT1 998 aa13.9□□□□□ -0.18
SH3TC1-225ENST00000515682 SIX6OS1Q8N1H7 587 aa13.9□□□□□ -0.18
SH3TC1-225ENST00000515682 FETUBQ9UGM5 382 aa13.9□□□□□ -0.18
SH3TC1-225ENST00000515682 TSPAN16Q9UKR8 245 aa13.9□□□□□ -0.18
SH3TC1-225ENST00000515682 A0A088AWK7 358 aa13.9□□□□□ -0.19
SH3TC1-225ENST00000515682 AMHP03971 560 aa13.9□□□□□ -0.19
SH3TC1-225ENST00000515682 ADORA2AP29274 412 aa13.9□□□□□ -0.19
SH3TC1-225ENST00000515682 NAA20P61599 178 aa13.9□□□□□ -0.19
SH3TC1-225ENST00000515682 ZNF554Q86TJ5 538 aa13.9□□□□□ -0.19
SH3TC1-225ENST00000515682 METTL23Q86XA0 190 aa13.9□□□□□ -0.19
SH3TC1-225ENST00000515682 ZNF781Q8N8C0 355 aa13.9□□□□□ -0.19
SH3TC1-225ENST00000515682 LRRC39Q96DD0 335 aa13.9□□□□□ -0.19
SH3TC1-225ENST00000515682 BTBD9Q96Q07 612 aa13.9□□□□□ -0.19
SH3TC1-225ENST00000515682 CIB1Q99828 191 aa13.9□□□□□ -0.19
SH3TC1-225ENST00000515682 OCEL1Q9H607 264 aa13.9□□□□□ -0.19
SH3TC1-225ENST00000515682 TMEM216Q9P0N5 145 aa13.9□□□□□ -0.19
SH3TC1-225ENST00000515682 AP4S1Q9Y587 144 aa13.9□□□□□ -0.19
SH3TC1-225ENST00000515682 PABPC4LP0CB38 370 aaKnown RBP13.89□□□□□ -0.19
SH3TC1-225ENST00000515682 OCM2P0CE71 109 aa13.89□□□□□ -0.19
SH3TC1-225ENST00000515682 OCMP0CE72 109 aaPredicted RBP13.89□□□□□ -0.19
SH3TC1-225ENST00000515682 TGFB3P10600 412 aa13.89□□□□□ -0.19
SH3TC1-225ENST00000515682 MPSTP25325 297 aa13.89□□□□□ -0.19
SH3TC1-225ENST00000515682 MAPRE2Q15555 327 aa13.89□□□□□ -0.19
SH3TC1-225ENST00000515682 DSELQ8IZU8 1212 aa13.89□□□□□ -0.19
SH3TC1-225ENST00000515682 SNRNP25Q9BV90 132 aaKnown RBP13.89□□□□□ -0.19
SH3TC1-225ENST00000515682 NMRAL1Q9HBL8 299 aa13.89□□□□□ -0.19
SH3TC1-225ENST00000515682 PTPRJQ12913 1337 aa13.89□□□□□ -0.19
SH3TC1-225ENST00000515682 C1orf232A0A0U1RR37 186 aa13.89□□□□□ -0.19
SH3TC1-225ENST00000515682 RGSL1A5PLK6 1076 aa13.89□□□□□ -0.19
SH3TC1-225ENST00000515682 FZD9O00144 591 aa13.89□□□□□ -0.19
SH3TC1-225ENST00000515682 PLIN3O60664 434 aa13.89□□□□□ -0.19
SH3TC1-225ENST00000515682 MYL4P12829 197 aa13.89□□□□□ -0.19
SH3TC1-225ENST00000515682 ITGAXP20702 1163 aa13.89□□□□□ -0.19
SH3TC1-225ENST00000515682 GMPRP36959 345 aa13.89□□□□□ -0.19
SH3TC1-225ENST00000515682 SULT1E1P49888 294 aa13.89□□□□□ -0.19
SH3TC1-225ENST00000515682 KPNA2P52292 529 aaKnown RBP13.89□□□□□ -0.19
SH3TC1-225ENST00000515682 GBE1Q04446 702 aa13.89□□□□□ -0.19
SH3TC1-225ENST00000515682 TRIM16LQ309B1 348 aa13.89□□□□□ -0.19
SH3TC1-225ENST00000515682 DCAF6Q58WW2 860 aa13.89□□□□□ -0.19
SH3TC1-225ENST00000515682 TMC7Q7Z402 723 aa13.89□□□□□ -0.19
SH3TC1-225ENST00000515682 TRPC7Q9HCX4 862 aa13.89□□□□□ -0.19
SH3TC1-225ENST00000515682 PKD2L2Q9NZM6 624 aa13.89□□□□□ -0.19
SH3TC1-225ENST00000515682 DNAJB4Q9UDY4 337 aa13.89□□□□□ -0.19
SH3TC1-225ENST00000515682 FNDC3AQ9Y2H6 1198 aaKnown RBP13.89□□□□□ -0.19
SH3TC1-225ENST00000515682 FARP1Q9Y4F1 1045 aaPredicted RBP13.89□□□□□ -0.19
SH3TC1-225ENST00000515682 COL18A1P39060 1754 aa13.89□□□□□ -0.19
SH3TC1-225ENST00000515682 ARPP19P56211 112 aa13.89□□□□□ -0.19
SH3TC1-225ENST00000515682 CBX3Q13185 183 aa13.89□□□□□ -0.19
SH3TC1-225ENST00000515682 STX5Q13190 355 aa13.89□□□□□ -0.19
SH3TC1-225ENST00000515682 NIPA1Q7RTP0 329 aa13.89□□□□□ -0.19
SH3TC1-225ENST00000515682 BEST2Q8NFU1 509 aa13.89□□□□□ -0.19
SH3TC1-225ENST00000515682 HTR3CQ8WXA8 447 aa13.89□□□□□ -0.19
SH3TC1-225ENST00000515682 ELMO2Q96JJ3 720 aa13.89□□□□□ -0.19
SH3TC1-225ENST00000515682 LGMNQ99538 433 aa13.89□□□□□ -0.19
SH3TC1-225ENST00000515682 TRIM15Q9C019 465 aa13.89□□□□□ -0.19
SH3TC1-225ENST00000515682 CHST12Q9NRB3 414 aa13.89□□□□□ -0.19
SH3TC1-225ENST00000515682 PCDHA11Q9Y5I1 949 aa13.89□□□□□ -0.19
SH3TC1-225ENST00000515682 TEX264Q9Y6I9 313 aa13.89□□□□□ -0.19
SH3TC1-225ENST00000515682 ZNF839A8K0R7 811 aa13.88□□□□□ -0.19
SH3TC1-225ENST00000515682 HPCAP84074 193 aa13.88□□□□□ -0.19
SH3TC1-225ENST00000515682 PPM1LQ5SGD2 360 aa13.88□□□□□ -0.19
SH3TC1-225ENST00000515682 PLD5Q8N7P1 536 aa13.88□□□□□ -0.19
SH3TC1-225ENST00000515682 FAM47BQ8NA70 645 aa13.88□□□□□ -0.19
SH3TC1-225ENST00000515682 STX16-NPEPL1H3BU86 382 aa13.88□□□□□ -0.19
SH3TC1-225ENST00000515682 RNF103O00237 685 aa13.88□□□□□ -0.19
SH3TC1-225ENST00000515682 PMM2O15305 246 aa13.88□□□□□ -0.19
SH3TC1-225ENST00000515682 SLC4A1P02730 911 aa13.88□□□□□ -0.19
SH3TC1-225ENST00000515682 XRCC1P18887 633 aaPredicted RBP13.88□□□□□ -0.19
SH3TC1-225ENST00000515682 ACO1P21399 889 aaKnown RBP13.88□□□□□ -0.19
SH3TC1-225ENST00000515682 NDST1P52848 882 aa13.88□□□□□ -0.19
SH3TC1-225ENST00000515682 PLK1P53350 603 aa13.88□□□□□ -0.19
SH3TC1-225ENST00000515682 FCGRTP55899 365 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms