RNA–Protein interactions for RNA: ENST00000514929.1

SNF8-213, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-213ENST00000514929 PLEKHG6Q3KR16 790 aa25.28■■□□□ 1.64
SNF8-213ENST00000514929 PPM1JQ5JR12 505 aa25.28■■□□□ 1.64
SNF8-213ENST00000514929 BRMS1LQ5PSV4 323 aa25.28■■□□□ 1.64
SNF8-213ENST00000514929 RNF219Q5W0B1 726 aaPredicted RBP25.28■■□□□ 1.64
SNF8-213ENST00000514929 SLC23A3Q6PIS1 610 aa25.28■■□□□ 1.64
SNF8-213ENST00000514929 RABEPKQ7Z6M1 372 aa25.28■■□□□ 1.64
SNF8-213ENST00000514929 ERGIC2Q96RQ1 377 aa25.28■■□□□ 1.64
SNF8-213ENST00000514929 NUP58Q9BVL2 599 aa25.28■■□□□ 1.64
SNF8-213ENST00000514929 SIK2Q9H0K1 926 aa25.28■■□□□ 1.64
SNF8-213ENST00000514929 HSD3B7Q9H2F3 369 aa25.28■■□□□ 1.64
SNF8-213ENST00000514929 ERVW-1Q9UQF0 538 aa25.28■■□□□ 1.64
SNF8-213ENST00000514929 PAXBP1Q9Y5B6 917 aa25.28■■□□□ 1.64
SNF8-213ENST00000514929 HS3ST4Q9Y661 456 aa25.28■■□□□ 1.64
SNF8-213ENST00000514929 ATP1A3P13637 1013 aa25.27■■□□□ 1.64
SNF8-213ENST00000514929 TFE3P19532 575 aaPredicted RBP25.27■■□□□ 1.64
SNF8-213ENST00000514929 GGCXP38435 758 aa25.27■■□□□ 1.64
SNF8-213ENST00000514929 CXCR3P49682 368 aa25.27■■□□□ 1.64
SNF8-213ENST00000514929 FMO1Q01740 532 aa25.27■■□□□ 1.64
SNF8-213ENST00000514929 CENPCQ03188 943 aa25.27■■□□□ 1.64
SNF8-213ENST00000514929 SLC12A1Q13621 1099 aa25.27■■□□□ 1.64
SNF8-213ENST00000514929 SLC25A52Q3SY17 297 aa25.27■■□□□ 1.64
SNF8-213ENST00000514929 TRIM72Q6ZMU5 477 aa25.27■■□□□ 1.64
SNF8-213ENST00000514929 APTXQ7Z2E3 356 aaKnown RBP25.27■■□□□ 1.64
SNF8-213ENST00000514929 FAM124AQ86V42 546 aa25.27■■□□□ 1.64
SNF8-213ENST00000514929 APCDD1Q8J025 514 aa25.27■■□□□ 1.64
SNF8-213ENST00000514929 IGSF8Q969P0 613 aa25.27■■□□□ 1.64
SNF8-213ENST00000514929 NT5C3BQ969T7 300 aa25.27■■□□□ 1.64
SNF8-213ENST00000514929 PGAP3Q96FM1 320 aaPredicted RBP25.27■■□□□ 1.64
SNF8-213ENST00000514929 MYO19Q96H55 970 aa25.27■■□□□ 1.64
SNF8-213ENST00000514929 MRGPRX3Q96LB0 322 aa25.27■■□□□ 1.64
SNF8-213ENST00000514929 TBCBQ99426 244 aa25.27■■□□□ 1.64
SNF8-213ENST00000514929 ADAM33Q9BZ11 813 aa25.27■■□□□ 1.64
SNF8-213ENST00000514929 TKTL2Q9H0I9 626 aa25.27■■□□□ 1.64
SNF8-213ENST00000514929 MTG2Q9H4K7 406 aa25.27■■□□□ 1.64
SNF8-213ENST00000514929 SLC6A14Q9UN76 642 aa25.27■■□□□ 1.64
SNF8-213ENST00000514929 MEI4A8MW99 385 aa25.26■■□□□ 1.63
SNF8-213ENST00000514929 TM4SF5O14894 197 aa25.26■■□□□ 1.63
SNF8-213ENST00000514929 ADCY5O95622 1261 aa25.26■■□□□ 1.63
SNF8-213ENST00000514929 IGLV3-19P01714 112 aa25.26■■□□□ 1.63
SNF8-213ENST00000514929 DNTTP04053 509 aa25.26■■□□□ 1.63
SNF8-213ENST00000514929 CYP1A1P04798 512 aaPredicted RBP25.26■■□□□ 1.63
SNF8-213ENST00000514929 SRPRAP08240 638 aaKnown RBP25.26■■□□□ 1.63
SNF8-213ENST00000514929 PDGFRAP16234 1089 aa25.26■■□□□ 1.63
SNF8-213ENST00000514929 CHRNB2P17787 502 aa25.26■■□□□ 1.63
SNF8-213ENST00000514929 FLT3P36888 993 aa25.26■■□□□ 1.63
SNF8-213ENST00000514929 CTSOP43234 321 aaPredicted RBP25.26■■□□□ 1.63
SNF8-213ENST00000514929 OXCT1P55809 520 aa25.26■■□□□ 1.63
SNF8-213ENST00000514929 RPS14P62263 151 aaKnown RBP25.26■■□□□ 1.63
SNF8-213ENST00000514929 ECT2LQ008S8 904 aa25.26■■□□□ 1.63
SNF8-213ENST00000514929 HNRNPA1L2Q32P51 320 aaKnown RBP25.26■■□□□ 1.63
SNF8-213ENST00000514929 WDR45BQ5MNZ6 344 aa25.26■■□□□ 1.63
SNF8-213ENST00000514929 DAB2IPQ5VWQ8 1189 aa25.26■■□□□ 1.63
SNF8-213ENST00000514929 KDM1BQ8NB78 822 aa25.26■■□□□ 1.63
SNF8-213ENST00000514929 TMEM51Q9NW97 253 aa25.26■■□□□ 1.63
SNF8-213ENST00000514929 ARHGEF38Q9NXL2 777 aa25.26■■□□□ 1.63
SNF8-213ENST00000514929 ENGP17813 658 aa25.25■■□□□ 1.63
SNF8-213ENST00000514929 MAPK8P45983 427 aa25.25■■□□□ 1.63
SNF8-213ENST00000514929 NUMBP49757 651 aa25.25■■□□□ 1.63
SNF8-213ENST00000514929 ZBTB16Q05516 673 aa25.25■■□□□ 1.63
SNF8-213ENST00000514929 DHX40Q8IX18 779 aaKnown RBP25.25■■□□□ 1.63
SNF8-213ENST00000514929 CADM4Q8NFZ8 388 aa25.25■■□□□ 1.63
SNF8-213ENST00000514929 BPIFA3Q9BQP9 254 aa25.25■■□□□ 1.63
SNF8-213ENST00000514929 METTL5Q9NRN9 209 aaKnown RBP25.25■■□□□ 1.63
SNF8-213ENST00000514929 TMEM59LQ9UK28 342 aa25.25■■□□□ 1.63
SNF8-213ENST00000514929 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP25.24■■□□□ 1.63
SNF8-213ENST00000514929 SMTNL1A8MU46 457 aa25.24■■□□□ 1.63
SNF8-213ENST00000514929 CDX4O14627 284 aaPredicted RBP25.24■■□□□ 1.63
SNF8-213ENST00000514929 SIN3BO75182 1162 aa25.24■■□□□ 1.63
SNF8-213ENST00000514929 SERPINF2P08697 491 aa25.24■■□□□ 1.63
SNF8-213ENST00000514929 MMP8P22894 467 aa25.24■■□□□ 1.63
SNF8-213ENST00000514929 MZF1P28698 734 aaPredicted RBP25.24■■□□□ 1.63
SNF8-213ENST00000514929 ATXN3P54252 364 aaPredicted RBP25.24■■□□□ 1.63
SNF8-213ENST00000514929 GFPT1Q06210 699 aaPredicted RBP25.24■■□□□ 1.63
SNF8-213ENST00000514929 ZNF177Q13360 481 aaPredicted RBP25.24■■□□□ 1.63
SNF8-213ENST00000514929 TTC31Q49AM3 519 aaPredicted RBP25.24■■□□□ 1.63
SNF8-213ENST00000514929 ZNF776Q68DI1 518 aaPredicted RBP25.24■■□□□ 1.63
SNF8-213ENST00000514929 CXorf57Q6NSI4 855 aaKnown RBP25.24■■□□□ 1.63
SNF8-213ENST00000514929 C14orf80Q86SX3 495 aa25.24■■□□□ 1.63
SNF8-213ENST00000514929 SLC30A5Q8TAD4 765 aa25.24■■□□□ 1.63
SNF8-213ENST00000514929 RPL10LQ96L21 214 aaKnown RBP25.24■■□□□ 1.63
SNF8-213ENST00000514929 CFAP57Q96MR6 1250 aa25.24■■□□□ 1.63
SNF8-213ENST00000514929 PPP1R9BQ96SB3 815 aa25.24■■□□□ 1.63
SNF8-213ENST00000514929 C11orf70Q9BRQ4 267 aa25.24■■□□□ 1.63
SNF8-213ENST00000514929 SUSD2Q9UGT4 822 aa25.24■■□□□ 1.63
SNF8-213ENST00000514929 GON4LQ3T8J9 2241 aa25.23■■□□□ 1.63
SNF8-213ENST00000514929 TTC34A8MYJ7 566 aa25.23■■□□□ 1.63
SNF8-213ENST00000514929 RNASEH1O60930 286 aaKnown RBP25.23■■□□□ 1.63
SNF8-213ENST00000514929 CLDN11O75508 207 aa25.23■■□□□ 1.63
SNF8-213ENST00000514929 GNSP15586 552 aa25.23■■□□□ 1.63
SNF8-213ENST00000514929 MAOBP27338 520 aa25.23■■□□□ 1.63
SNF8-213ENST00000514929 NNMTP40261 264 aa25.23■■□□□ 1.63
SNF8-213ENST00000514929 IRAK1P51617 712 aa25.23■■□□□ 1.63
SNF8-213ENST00000514929 SULT2A1Q06520 285 aa25.23■■□□□ 1.63
SNF8-213ENST00000514929 UAP1L1Q3KQV9 507 aa25.23■■□□□ 1.63
SNF8-213ENST00000514929 TRNP1Q6NT89 227 aa25.23■■□□□ 1.63
SNF8-213ENST00000514929 ARCQ7LC44 396 aa25.23■■□□□ 1.63
SNF8-213ENST00000514929 PHLDB2Q86SQ0 1253 aa25.23■■□□□ 1.63
SNF8-213ENST00000514929 EMC1Q8N766 993 aa25.23■■□□□ 1.63
SNF8-213ENST00000514929 RSPH9Q9H1X1 276 aaPredicted RBP25.23■■□□□ 1.63
SNF8-213ENST00000514929 FSCN3Q9NQT6 498 aa25.23■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms