RNA–Protein interactions for RNA: ENST00000514901.5

NUP54-216, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 500 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-216ENST00000514901 CD70P32970 193 aa14.69□□□□□ -0.06
NUP54-216ENST00000514901 PLK1P53350 603 aa14.69□□□□□ -0.06
NUP54-216ENST00000514901 NRLP54845 237 aa14.69□□□□□ -0.06
NUP54-216ENST00000514901 LMAN2Q12907 356 aa14.69□□□□□ -0.06
NUP54-216ENST00000514901 ANGPT1Q15389 498 aa14.69□□□□□ -0.06
NUP54-216ENST00000514901 C6orf118Q5T5N4 469 aa14.69□□□□□ -0.06
NUP54-216ENST00000514901 EMC10Q5UCC4 262 aa14.69□□□□□ -0.06
NUP54-216ENST00000514901 MANEALQ5VSG8 457 aa14.69□□□□□ -0.06
NUP54-216ENST00000514901 MBLAC2Q68D91 279 aa14.69□□□□□ -0.06
NUP54-216ENST00000514901 ZNF783Q6ZMS7 281 aa14.69□□□□□ -0.06
NUP54-216ENST00000514901 ADIPOR2Q86V24 386 aa14.69□□□□□ -0.06
NUP54-216ENST00000514901 CAMKK1Q8N5S9 505 aa14.69□□□□□ -0.06
NUP54-216ENST00000514901 IL17RCQ8NAC3 791 aa14.69□□□□□ -0.06
NUP54-216ENST00000514901 SLC35G2Q8TBE7 412 aa14.69□□□□□ -0.06
NUP54-216ENST00000514901 WFDC5Q8TCV5 224 aa14.69□□□□□ -0.06
NUP54-216ENST00000514901 RFFLQ8WZ73 363 aa14.69□□□□□ -0.06
NUP54-216ENST00000514901 TTC17Q96AE7 1141 aa14.69□□□□□ -0.06
NUP54-216ENST00000514901 TBC1D31Q96DN5 1066 aa14.69□□□□□ -0.06
NUP54-216ENST00000514901 EPAS1Q99814 870 aa14.69□□□□□ -0.06
NUP54-216ENST00000514901 CIPCQ9C0C6 399 aa14.69□□□□□ -0.06
NUP54-216ENST00000514901 DONSONQ9NYP3 566 aa14.69□□□□□ -0.06
NUP54-216ENST00000514901 THAP10Q9P2Z0 257 aaPredicted RBP14.69□□□□□ -0.06
NUP54-216ENST00000514901 PCSK1NQ9UHG2 260 aa14.69□□□□□ -0.06
NUP54-216ENST00000514901 MMP17Q9ULZ9 603 aa14.69□□□□□ -0.06
NUP54-216ENST00000514901 PLA2G4CQ9UP65 541 aa14.69□□□□□ -0.06
NUP54-216ENST00000514901 SNX10Q9Y5X0 201 aa14.69□□□□□ -0.06
NUP54-216ENST00000514901 SOWAHDA6NJG2 315 aa14.68□□□□□ -0.06
NUP54-216ENST00000514901 LRIG2O94898 1065 aa14.68□□□□□ -0.06
NUP54-216ENST00000514901 PROSCO94903 275 aa14.68□□□□□ -0.06
NUP54-216ENST00000514901 KLF8O95600 359 aaPredicted RBP14.68□□□□□ -0.06
NUP54-216ENST00000514901 ASLP04424 464 aa14.68□□□□□ -0.06
NUP54-216ENST00000514901 DLDP09622 509 aaKnown RBP14.68□□□□□ -0.06
NUP54-216ENST00000514901 CHRM1P11229 460 aaPredicted RBP14.68□□□□□ -0.06
NUP54-216ENST00000514901 RHOQP17081 205 aa14.68□□□□□ -0.06
NUP54-216ENST00000514901 MAN1A1P33908 653 aa14.68□□□□□ -0.06
NUP54-216ENST00000514901 GGCXP38435 758 aa14.68□□□□□ -0.06
NUP54-216ENST00000514901 MRE11P49959 708 aa14.68□□□□□ -0.06
NUP54-216ENST00000514901 DGKEP52429 567 aa14.68□□□□□ -0.06
NUP54-216ENST00000514901 PTPN5P54829 565 aa14.68□□□□□ -0.06
NUP54-216ENST00000514901 SATB1Q01826 763 aa14.68□□□□□ -0.06
NUP54-216ENST00000514901 SULT2A1Q06520 285 aa14.68□□□□□ -0.06
NUP54-216ENST00000514901 HADHQ16836 314 aaKnown RBP14.68□□□□□ -0.06
NUP54-216ENST00000514901 ALFQ53S48 1182 aa14.68□□□□□ -0.06
NUP54-216ENST00000514901 FSCBQ5H9T9 825 aa14.68□□□□□ -0.06
NUP54-216ENST00000514901 EGFLAMQ63HQ2 1017 aa14.68□□□□□ -0.06
NUP54-216ENST00000514901 TMEM215Q68D42 235 aa14.68□□□□□ -0.06
NUP54-216ENST00000514901 RWDD4Q6NW29 188 aaKnown RBP14.68□□□□□ -0.06
NUP54-216ENST00000514901 CIR1Q86X95 450 aaPredicted RBP14.68□□□□□ -0.06
NUP54-216ENST00000514901 CHPFQ8IZ52 775 aa14.68□□□□□ -0.06
NUP54-216ENST00000514901 TXLNBQ8N3L3 684 aa14.68□□□□□ -0.06
NUP54-216ENST00000514901 ALLCQ8N6M5 410 aa14.68□□□□□ -0.06
NUP54-216ENST00000514901 TXNDC5Q8NBS9 432 aaKnown RBP14.68□□□□□ -0.06
NUP54-216ENST00000514901 BTBD6Q96KE9 485 aa14.68□□□□□ -0.06
NUP54-216ENST00000514901 CALR3Q96L12 384 aaKnown RBP14.68□□□□□ -0.06
NUP54-216ENST00000514901 DOCK4Q8N1I0 1966 aa14.67□□□□□ -0.06
NUP54-216ENST00000514901 A0A0A6YYK5 440 aaPredicted RBP14.67□□□□□ -0.06
NUP54-216ENST00000514901 CNTN5O94779 1100 aa14.67□□□□□ -0.06
NUP54-216ENST00000514901 OR1E1P30953 314 aa14.67□□□□□ -0.06
NUP54-216ENST00000514901 MAPKAPK2P49137 400 aa14.67□□□□□ -0.06
NUP54-216ENST00000514901 KRT83P78385 493 aa14.67□□□□□ -0.06
NUP54-216ENST00000514901 CSTF1Q05048 431 aaKnown RBP14.67□□□□□ -0.06
NUP54-216ENST00000514901 PLEKHG6Q3KR16 790 aa14.67□□□□□ -0.06
NUP54-216ENST00000514901 PITRM1Q5JRX3 1037 aa14.67□□□□□ -0.06
NUP54-216ENST00000514901 ARTNQ5T4W7 220 aa14.67□□□□□ -0.06
NUP54-216ENST00000514901 CXorf57Q6NSI4 855 aaKnown RBP14.67□□□□□ -0.06
NUP54-216ENST00000514901 PKN3Q6P5Z2 889 aa14.67□□□□□ -0.06
NUP54-216ENST00000514901 MAML2Q8IZL2 1156 aaPredicted RBP14.67□□□□□ -0.06
NUP54-216ENST00000514901 CCDC33Q8N5R6 958 aa14.67□□□□□ -0.06
NUP54-216ENST00000514901 KDM1BQ8NB78 822 aa14.67□□□□□ -0.06
NUP54-216ENST00000514901 CCDC112Q8NEF3 446 aa14.67□□□□□ -0.06
NUP54-216ENST00000514901 TEKT4Q8WW24 435 aa14.67□□□□□ -0.06
NUP54-216ENST00000514901 ANP32BQ92688 251 aaKnown RBP14.67□□□□□ -0.06
NUP54-216ENST00000514901 GABRG3Q99928 467 aa14.67□□□□□ -0.06
NUP54-216ENST00000514901 FEM1AQ9BSK4 669 aa14.67□□□□□ -0.06
NUP54-216ENST00000514901 CATSPERBQ9H7T0 1116 aa14.67□□□□□ -0.06
NUP54-216ENST00000514901 POLMQ9NP87 494 aaPredicted RBP14.67□□□□□ -0.06
NUP54-216ENST00000514901 OSGEPQ9NPF4 335 aa14.67□□□□□ -0.06
NUP54-216ENST00000514901 MPP6Q9NZW5 540 aa14.67□□□□□ -0.06
NUP54-216ENST00000514901 HCN2Q9UL51 889 aa14.67□□□□□ -0.06
NUP54-216ENST00000514901 AP4E1Q9UPM8 1137 aa14.67□□□□□ -0.06
NUP54-216ENST00000514901 WDFY4Q6ZS81 3184 aa14.66□□□□□ -0.06
NUP54-216ENST00000514901 CCDC163A0A0D9SF12 145 aa14.66□□□□□ -0.06
NUP54-216ENST00000514901 ILVBLA1L0T0 632 aa14.66□□□□□ -0.06
NUP54-216ENST00000514901 FAM72CH0Y354 149 aa14.66□□□□□ -0.06
NUP54-216ENST00000514901 SGK1O00141 431 aa14.66□□□□□ -0.06
NUP54-216ENST00000514901 FGF10O15520 208 aaPredicted RBP14.66□□□□□ -0.06
NUP54-216ENST00000514901 ZBTB24O43167 697 aaPredicted RBP14.66□□□□□ -0.06
NUP54-216ENST00000514901 CREB3O43889 395 aa14.66□□□□□ -0.06
NUP54-216ENST00000514901 ADAM23O75077 832 aa14.66□□□□□ -0.06
NUP54-216ENST00000514901 ALDH1A2O94788 518 aa14.66□□□□□ -0.06
NUP54-216ENST00000514901 APBB3O95704 486 aa14.66□□□□□ -0.06
NUP54-216ENST00000514901 RHOCP08134 193 aa14.66□□□□□ -0.06
NUP54-216ENST00000514901 SRPRAP08240 638 aaKnown RBP14.66□□□□□ -0.06
NUP54-216ENST00000514901 SP9P0CG40 484 aa14.66□□□□□ -0.06
NUP54-216ENST00000514901 COL9A1P20849 921 aa14.66□□□□□ -0.06
NUP54-216ENST00000514901 EPHB2P29323 1055 aa14.66□□□□□ -0.06
NUP54-216ENST00000514901 HOXC13P31276 330 aa14.66□□□□□ -0.06
NUP54-216ENST00000514901 ETFBP38117 255 aa14.66□□□□□ -0.06
NUP54-216ENST00000514901 CSKP41240 450 aa14.66□□□□□ -0.06
NUP54-216ENST00000514901 SLC1A1P43005 524 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms