RNA–Protein interactions for RNA: ENST00000514093.5

SQSTM1-215, Transcript of sequestosome 1, humanhuman

TSL 5

Gene SQSTM1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-215ENST00000514093 MAPK13O15264 365 aa21.07■□□□□ 0.96
SQSTM1-215ENST00000514093 SIGLEC6O43699 453 aa21.07■□□□□ 0.96
SQSTM1-215ENST00000514093 ACSL4O60488 711 aa21.07■□□□□ 0.96
SQSTM1-215ENST00000514093 ASLP04424 464 aa21.07■□□□□ 0.96
SQSTM1-215ENST00000514093 LCP1P13796 627 aa21.07■□□□□ 0.96
SQSTM1-215ENST00000514093 GOT1P17174 413 aa21.07■□□□□ 0.96
SQSTM1-215ENST00000514093 ACP1P24666 158 aa21.07■□□□□ 0.96
SQSTM1-215ENST00000514093 ME1P48163 572 aa21.07■□□□□ 0.96
SQSTM1-215ENST00000514093 RPS24P62847 133 aaKnown RBP21.07■□□□□ 0.96
SQSTM1-215ENST00000514093 LY6DQ14210 128 aa21.07■□□□□ 0.96
SQSTM1-215ENST00000514093 PROX2Q3B8N5 592 aa21.07■□□□□ 0.96
SQSTM1-215ENST00000514093 RESP18Q5W5W9 173 aa21.07■□□□□ 0.96
SQSTM1-215ENST00000514093 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP21.07■□□□□ 0.96
SQSTM1-215ENST00000514093 SIX6OS1Q8N1H7 587 aa21.07■□□□□ 0.96
SQSTM1-215ENST00000514093 CACTIN-AS1Q8N1I8 211 aa21.07■□□□□ 0.96
SQSTM1-215ENST00000514093 STK40Q8N2I9 435 aa21.07■□□□□ 0.96
SQSTM1-215ENST00000514093 ZNF248Q8NDW4 579 aa21.07■□□□□ 0.96
SQSTM1-215ENST00000514093 PRICKLE1Q96MT3 831 aaPredicted RBP21.07■□□□□ 0.96
SQSTM1-215ENST00000514093 TRAF3IP3Q9Y228 551 aa21.07■□□□□ 0.96
SQSTM1-215ENST00000514093 TARSL2A2RTX5 802 aaKnown RBP21.06■□□□□ 0.96
SQSTM1-215ENST00000514093 CAPN8A6NHC0 703 aa21.06■□□□□ 0.96
SQSTM1-215ENST00000514093 MPOP05164 745 aa21.06■□□□□ 0.96
SQSTM1-215ENST00000514093 MAT2AP31153 395 aaKnown RBP21.06■□□□□ 0.96
SQSTM1-215ENST00000514093 SLC11A2P49281 568 aa21.06■□□□□ 0.96
SQSTM1-215ENST00000514093 PITRM1Q5JRX3 1037 aa21.06■□□□□ 0.96
SQSTM1-215ENST00000514093 KRT39Q6A163 491 aa21.06■□□□□ 0.96
SQSTM1-215ENST00000514093 CFAP52Q8N1V2 620 aa21.06■□□□□ 0.96
SQSTM1-215ENST00000514093 OXR1Q8N573 874 aa21.06■□□□□ 0.96
SQSTM1-215ENST00000514093 MFSD2AQ8NA29 543 aa21.06■□□□□ 0.96
SQSTM1-215ENST00000514093 RPL10LQ96L21 214 aaKnown RBP21.06■□□□□ 0.96
SQSTM1-215ENST00000514093 MAPK8IP1Q9UQF2 711 aa21.06■□□□□ 0.96
SQSTM1-215ENST00000514093 CEP83Q9Y592 693 aa21.06■□□□□ 0.96
SQSTM1-215ENST00000514093 EDDM13A0A1B0GTR0 161 aa21.05■□□□□ 0.96
SQSTM1-215ENST00000514093 IRAK2O43187 625 aa21.05■□□□□ 0.96
SQSTM1-215ENST00000514093 ACTN4O43707 911 aaKnown RBP21.05■□□□□ 0.96
SQSTM1-215ENST00000514093 IL1BP01584 269 aa21.05■□□□□ 0.96
SQSTM1-215ENST00000514093 IGLV3-27P01718 113 aa21.05■□□□□ 0.96
SQSTM1-215ENST00000514093 CD19P15391 556 aa21.05■□□□□ 0.96
SQSTM1-215ENST00000514093 METAP1P53582 386 aa21.05■□□□□ 0.96
SQSTM1-215ENST00000514093 TBX4P57082 545 aa21.05■□□□□ 0.96
SQSTM1-215ENST00000514093 BST2Q10589 180 aaKnown RBP21.05■□□□□ 0.96
SQSTM1-215ENST00000514093 NAPEPLDQ6IQ20 393 aa21.05■□□□□ 0.96
SQSTM1-215ENST00000514093 UNC45BQ8IWX7 931 aa21.05■□□□□ 0.96
SQSTM1-215ENST00000514093 TTC39CQ8N584 583 aa21.05■□□□□ 0.96
SQSTM1-215ENST00000514093 HJURPQ8NCD3 748 aaPredicted RBP21.05■□□□□ 0.96
SQSTM1-215ENST00000514093 INTS4Q96HW7 963 aaKnown RBP21.05■□□□□ 0.96
SQSTM1-215ENST00000514093 CAAP1Q9H8G2 361 aa21.05■□□□□ 0.96
SQSTM1-215ENST00000514093 ARHGAP20Q9P2F6 1191 aa21.05■□□□□ 0.96
SQSTM1-215ENST00000514093 HESX1Q9UBX0 185 aa21.05■□□□□ 0.96
SQSTM1-215ENST00000514093 CA5BQ9Y2D0 317 aa21.05■□□□□ 0.96
SQSTM1-215ENST00000514093 LATO43561 262 aa21.04■□□□□ 0.96
SQSTM1-215ENST00000514093 KRT10P13645 584 aa21.04■□□□□ 0.96
SQSTM1-215ENST00000514093 VAV1P15498 845 aa21.04■□□□□ 0.96
SQSTM1-215ENST00000514093 C5AR1P21730 350 aa21.04■□□□□ 0.96
SQSTM1-215ENST00000514093 PSMC2P35998 433 aaKnown RBP21.04■□□□□ 0.96
SQSTM1-215ENST00000514093 RGS7P49802 495 aa21.04■□□□□ 0.96
SQSTM1-215ENST00000514093 PCBP4P57723 403 aaKnown RBP21.04■□□□□ 0.96
SQSTM1-215ENST00000514093 TMPRSS3P57727 454 aa21.04■□□□□ 0.96
SQSTM1-215ENST00000514093 DAOAP59103 153 aa21.04■□□□□ 0.96
SQSTM1-215ENST00000514093 DAB2P98082 770 aa21.04■□□□□ 0.96
SQSTM1-215ENST00000514093 E2F1Q01094 437 aa21.04■□□□□ 0.96
SQSTM1-215ENST00000514093 RHDQ02161 417 aa21.04■□□□□ 0.96
SQSTM1-215ENST00000514093 ARID5BQ14865 1188 aa21.04■□□□□ 0.96
SQSTM1-215ENST00000514093 BROXQ5VW32 411 aa21.04■□□□□ 0.96
SQSTM1-215ENST00000514093 PRPF39Q86UA1 669 aaKnown RBP21.04■□□□□ 0.96
SQSTM1-215ENST00000514093 APCDD1Q8J025 514 aa21.04■□□□□ 0.96
SQSTM1-215ENST00000514093 SLC25A45Q8N413 288 aa21.04■□□□□ 0.96
SQSTM1-215ENST00000514093 ZNF557Q8N988 423 aaPredicted RBP21.04■□□□□ 0.96
SQSTM1-215ENST00000514093 FAM181AQ8N9Y4 354 aa21.04■□□□□ 0.96
SQSTM1-215ENST00000514093 EEF2KMTQ96G04 330 aa21.04■□□□□ 0.96
SQSTM1-215ENST00000514093 RAB20Q9NX57 234 aa21.04■□□□□ 0.96
SQSTM1-215ENST00000514093 MYO18BQ8IUG5 2567 aa21.04■□□□□ 0.96
SQSTM1-215ENST00000514093 RTN2O75298 545 aa21.03■□□□□ 0.96
SQSTM1-215ENST00000514093 GABBR2O75899 941 aa21.03■□□□□ 0.96
SQSTM1-215ENST00000514093 ADH1BP00325 375 aa21.03■□□□□ 0.96
SQSTM1-215ENST00000514093 SRPRAP08240 638 aaKnown RBP21.03■□□□□ 0.96
SQSTM1-215ENST00000514093 DRD3P35462 400 aa21.03■□□□□ 0.96
SQSTM1-215ENST00000514093 STK19P49842 368 aaPredicted RBP21.03■□□□□ 0.96
SQSTM1-215ENST00000514093 ECT2LQ008S8 904 aa21.03■□□□□ 0.96
SQSTM1-215ENST00000514093 ADAM9Q13443 819 aa21.03■□□□□ 0.96
SQSTM1-215ENST00000514093 CDH18Q13634 790 aa21.03■□□□□ 0.96
SQSTM1-215ENST00000514093 POM121L1PQ3SYA9 428 aa21.03■□□□□ 0.96
SQSTM1-215ENST00000514093 SGO2Q562F6 1265 aa21.03■□□□□ 0.96
SQSTM1-215ENST00000514093 NUGGCQ68CJ6 796 aa21.03■□□□□ 0.96
SQSTM1-215ENST00000514093 MSANTD2Q6P1R3 559 aa21.03■□□□□ 0.96
SQSTM1-215ENST00000514093 TMC6Q7Z403 805 aa21.03■□□□□ 0.96
SQSTM1-215ENST00000514093 KDM1BQ8NB78 822 aa21.03■□□□□ 0.96
SQSTM1-215ENST00000514093 FBXL13Q8NEE6 735 aa21.03■□□□□ 0.96
SQSTM1-215ENST00000514093 PTPRN2Q92932 1015 aa21.03■□□□□ 0.96
SQSTM1-215ENST00000514093 HIC2Q96JB3 615 aa21.03■□□□□ 0.96
SQSTM1-215ENST00000514093 ZNF578Q96N58 590 aaPredicted RBP21.03■□□□□ 0.96
SQSTM1-215ENST00000514093 NUCKS1Q9H1E3 243 aaKnown RBP21.03■□□□□ 0.96
SQSTM1-215ENST00000514093 CNGB3Q9NQW8 809 aa21.03■□□□□ 0.96
SQSTM1-215ENST00000514093 CYTH4Q9UIA0 394 aa21.03■□□□□ 0.96
SQSTM1-215ENST00000514093 TYW5A2RUC4 315 aaKnown RBP21.02■□□□□ 0.96
SQSTM1-215ENST00000514093 KLK10O43240 276 aa21.02■□□□□ 0.96
SQSTM1-215ENST00000514093 MYF5P13349 255 aa21.02■□□□□ 0.96
SQSTM1-215ENST00000514093 MZF1P28698 734 aaPredicted RBP21.02■□□□□ 0.96
SQSTM1-215ENST00000514093 MXI1P50539 228 aa21.02■□□□□ 0.96
SQSTM1-215ENST00000514093 GABREP78334 506 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms