RNA–Protein interactions for RNA: ENST00000513957.1

NEDD4-210, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-210ENST00000513957 ATP1A2P50993 1020 aa8.45□□□□□ -1.06
NEDD4-210ENST00000513957 ZNF135P52742 658 aaPredicted RBP8.45□□□□□ -1.06
NEDD4-210ENST00000513957 CDH4P55283 916 aa8.45□□□□□ -1.06
NEDD4-210ENST00000513957 TAGLNQ01995 201 aaKnown RBP8.45□□□□□ -1.06
NEDD4-210ENST00000513957 SULT2A1Q06520 285 aa8.45□□□□□ -1.06
NEDD4-210ENST00000513957 SCAPQ12770 1279 aa8.45□□□□□ -1.06
NEDD4-210ENST00000513957 AUHQ13825 339 aaKnown RBP8.45□□□□□ -1.06
NEDD4-210ENST00000513957 BYSLQ13895 437 aaKnown RBP8.45□□□□□ -1.06
NEDD4-210ENST00000513957 SLC18A3Q16572 532 aa8.45□□□□□ -1.06
NEDD4-210ENST00000513957 CCDC14Q49A88 953 aa8.45□□□□□ -1.06
NEDD4-210ENST00000513957 C2CD6Q53TS8 623 aa8.45□□□□□ -1.06
NEDD4-210ENST00000513957 C2orf27AQ580R0 203 aa8.45□□□□□ -1.06
NEDD4-210ENST00000513957 RAP1GAP2Q684P5 730 aa8.45□□□□□ -1.06
NEDD4-210ENST00000513957 DESI1Q6ICB0 168 aa8.45□□□□□ -1.06
NEDD4-210ENST00000513957 TRNP1Q6NT89 227 aa8.45□□□□□ -1.06
NEDD4-210ENST00000513957 RFWD3Q6PCD5 774 aa8.45□□□□□ -1.06
NEDD4-210ENST00000513957 ZNF783Q6ZMS7 281 aa8.45□□□□□ -1.06
NEDD4-210ENST00000513957 SETD3Q86TU7 594 aaPredicted RBP8.45□□□□□ -1.06
NEDD4-210ENST00000513957 WDR5BQ86VZ2 330 aa8.45□□□□□ -1.06
NEDD4-210ENST00000513957 RASSF3Q86WH2 238 aa8.45□□□□□ -1.06
NEDD4-210ENST00000513957 CHPFQ8IZ52 775 aa8.45□□□□□ -1.06
NEDD4-210ENST00000513957 LGI2Q8N0V4 545 aa8.45□□□□□ -1.06
NEDD4-210ENST00000513957 TSTD1Q8NFU3 115 aa8.45□□□□□ -1.06
NEDD4-210ENST00000513957 RXFP2Q8WXD0 754 aa8.45□□□□□ -1.06
NEDD4-210ENST00000513957 RPRD1AQ96P16 312 aaPredicted RBP8.45□□□□□ -1.06
NEDD4-210ENST00000513957 MCEEQ96PE7 176 aa8.45□□□□□ -1.06
NEDD4-210ENST00000513957 EPC1Q9H2F5 836 aa8.45□□□□□ -1.06
NEDD4-210ENST00000513957 ELOVL2Q9NXB9 296 aa8.45□□□□□ -1.06
NEDD4-210ENST00000513957 PLK2Q9NYY3 685 aa8.45□□□□□ -1.06
NEDD4-210ENST00000513957 PPARGC1AQ9UBK2 798 aaKnown RBP8.45□□□□□ -1.06
NEDD4-210ENST00000513957 HS3ST4Q9Y661 456 aa8.45□□□□□ -1.06
NEDD4-210ENST00000513957 MYO15AQ9UKN7 3530 aa8.45□□□□□ -1.06
NEDD4-210ENST00000513957 RALGAPA1Q6GYQ0 2036 aa8.44□□□□□ -1.06
NEDD4-210ENST00000513957 SYNJ2BP-COX16A0A087WUM0 186 aa8.44□□□□□ -1.06
NEDD4-210ENST00000513957 PRRT4C9JH25 899 aa8.44□□□□□ -1.06
NEDD4-210ENST00000513957 H0Y626 953 aa8.44□□□□□ -1.06
NEDD4-210ENST00000513957 TSPAN3O60637 253 aa8.44□□□□□ -1.06
NEDD4-210ENST00000513957 KLF8O95600 359 aaPredicted RBP8.44□□□□□ -1.06
NEDD4-210ENST00000513957 SRPRAP08240 638 aaKnown RBP8.44□□□□□ -1.06
NEDD4-210ENST00000513957 DLDP09622 509 aaKnown RBP8.44□□□□□ -1.06
NEDD4-210ENST00000513957 HOXB2P14652 356 aa8.44□□□□□ -1.06
NEDD4-210ENST00000513957 POLR2EP19388 210 aaKnown RBP8.44□□□□□ -1.06
NEDD4-210ENST00000513957 RFC1P35251 1148 aaPredicted RBP8.44□□□□□ -1.06
NEDD4-210ENST00000513957 ETFBP38117 255 aa8.44□□□□□ -1.06
NEDD4-210ENST00000513957 PLK1P53350 603 aa8.44□□□□□ -1.06
NEDD4-210ENST00000513957 SEC13P55735 322 aa8.44□□□□□ -1.06
NEDD4-210ENST00000513957 HDAC4P56524 1084 aa8.44□□□□□ -1.06
NEDD4-210ENST00000513957 RPS24P62847 133 aaKnown RBP8.44□□□□□ -1.06
NEDD4-210ENST00000513957 ATP11AP98196 1134 aa8.44□□□□□ -1.06
NEDD4-210ENST00000513957 MESP2Q0VG99 397 aa8.44□□□□□ -1.06
NEDD4-210ENST00000513957 MAMLD1Q13495 774 aa8.44□□□□□ -1.06
NEDD4-210ENST00000513957 STARD3Q14849 445 aa8.44□□□□□ -1.06
NEDD4-210ENST00000513957 GEN1Q17RS7 908 aa8.44□□□□□ -1.06
NEDD4-210ENST00000513957 MAP7D1Q3KQU3 841 aa8.44□□□□□ -1.06
NEDD4-210ENST00000513957 C6orf118Q5T5N4 469 aa8.44□□□□□ -1.06
NEDD4-210ENST00000513957 FBXL22Q6P050 247 aa8.44□□□□□ -1.06
NEDD4-210ENST00000513957 PKN3Q6P5Z2 889 aa8.44□□□□□ -1.06
NEDD4-210ENST00000513957 ALKBH5Q6P6C2 394 aaKnown RBP8.44□□□□□ -1.06
NEDD4-210ENST00000513957 WDR59Q6PJI9 974 aa8.44□□□□□ -1.06
NEDD4-210ENST00000513957 FAM131BQ86XD5 332 aa8.44□□□□□ -1.06
NEDD4-210ENST00000513957 PSTKQ8IV42 348 aaKnown RBP8.44□□□□□ -1.06
NEDD4-210ENST00000513957 RGL4Q8IZJ4 473 aa8.44□□□□□ -1.06
NEDD4-210ENST00000513957 ALLCQ8N6M5 410 aa8.44□□□□□ -1.06
NEDD4-210ENST00000513957 EMC1Q8N766 993 aa8.44□□□□□ -1.06
NEDD4-210ENST00000513957 TXNDC5Q8NBS9 432 aaKnown RBP8.44□□□□□ -1.06
NEDD4-210ENST00000513957 JOSD2Q8TAC2 188 aa8.44□□□□□ -1.06
NEDD4-210ENST00000513957 FAM172AQ8WUF8 416 aa8.44□□□□□ -1.06
NEDD4-210ENST00000513957 CPLX3Q8WVH0 158 aa8.44□□□□□ -1.06
NEDD4-210ENST00000513957 BHMTQ93088 406 aa8.44□□□□□ -1.06
NEDD4-210ENST00000513957 NKD2Q969F2 451 aaPredicted RBP8.44□□□□□ -1.06
NEDD4-210ENST00000513957 ZNF653Q96CK0 615 aa8.44□□□□□ -1.06
NEDD4-210ENST00000513957 LMLNQ96KR4 655 aa8.44□□□□□ -1.06
NEDD4-210ENST00000513957 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.44□□□□□ -1.06
NEDD4-210ENST00000513957 OSBPL2Q9H1P3 480 aa8.44□□□□□ -1.06
NEDD4-210ENST00000513957 ABCB8Q9NUT2 735 aa8.44□□□□□ -1.06
NEDD4-210ENST00000513957 COX16Q9P0S2 106 aa8.44□□□□□ -1.06
NEDD4-210ENST00000513957 CALCOCO1Q9P1Z2 691 aa8.44□□□□□ -1.06
NEDD4-210ENST00000513957 ARHGAP20Q9P2F6 1191 aa8.44□□□□□ -1.06
NEDD4-210ENST00000513957 THAP10Q9P2Z0 257 aaPredicted RBP8.44□□□□□ -1.06
NEDD4-210ENST00000513957 CNOT8Q9UFF9 292 aaKnown RBP8.44□□□□□ -1.06
NEDD4-210ENST00000513957 ADAMTS1Q9UHI8 967 aa8.44□□□□□ -1.06
NEDD4-210ENST00000513957 XPO7Q9UIA9 1087 aaKnown RBP8.44□□□□□ -1.06
NEDD4-210ENST00000513957 PLA2G4CQ9UP65 541 aa8.44□□□□□ -1.06
NEDD4-210ENST00000513957 TBC1D30Q9Y2I9 924 aa8.44□□□□□ -1.06
NEDD4-210ENST00000513957 TNRC6BQ9UPQ9 1833 aaKnown RBP8.44□□□□□ -1.06
NEDD4-210ENST00000513957 USP34Q70CQ2 3546 aa8.44□□□□□ -1.06
NEDD4-210ENST00000513957 NUP205Q92621 2012 aa8.44□□□□□ -1.06
NEDD4-210ENST00000513957 A0A087X0T9 212 aa8.43□□□□□ -1.06
NEDD4-210ENST00000513957 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.43□□□□□ -1.06
NEDD4-210ENST00000513957 GOLGA6L7A0A1B0GV03 622 aa8.43□□□□□ -1.06
NEDD4-210ENST00000513957 DRGXA6NNA5 263 aa8.43□□□□□ -1.06
NEDD4-210ENST00000513957 AKR1B15C9JRZ8 316 aaPredicted RBP8.43□□□□□ -1.06
NEDD4-210ENST00000513957 E9PAM4 449 aa8.43□□□□□ -1.06
NEDD4-210ENST00000513957 SGK1O00141 431 aa8.43□□□□□ -1.06
NEDD4-210ENST00000513957 AXIN1O15169 862 aa8.43□□□□□ -1.06
NEDD4-210ENST00000513957 ADAM23O75077 832 aa8.43□□□□□ -1.06
NEDD4-210ENST00000513957 ZNF217O75362 1048 aa8.43□□□□□ -1.06
NEDD4-210ENST00000513957 RNF8O76064 485 aa8.43□□□□□ -1.06
NEDD4-210ENST00000513957 ADCY5O95622 1261 aa8.43□□□□□ -1.06
NEDD4-210ENST00000513957 LMNAP02545 664 aaKnown RBP8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms