RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 NMUR1Q9HB89 426 aa7.53□□□□□ -1.2
USP46-208ENST00000512656 APOBEC3GQ9HC16 384 aaKnown RBP7.53□□□□□ -1.2
USP46-208ENST00000512656 OSGEPQ9NPF4 335 aa7.53□□□□□ -1.2
USP46-208ENST00000512656 ZDHHC4Q9NPG8 344 aa7.53□□□□□ -1.2
USP46-208ENST00000512656 SUSD2Q9UGT4 822 aa7.53□□□□□ -1.2
USP46-208ENST00000512656 PILRBQ9UKJ0 227 aa7.53□□□□□ -1.2
USP46-208ENST00000512656 STRIP2Q9ULQ0 834 aa7.53□□□□□ -1.2
USP46-208ENST00000512656 MYO16Q9Y6X6 1858 aa7.53□□□□□ -1.2
USP46-208ENST00000512656 MYO18AQ92614 2054 aaKnown RBP7.53□□□□□ -1.2
USP46-208ENST00000512656 NUP205Q92621 2012 aa7.52□□□□□ -1.2
USP46-208ENST00000512656 MYOFQ9NZM1 2061 aa7.52□□□□□ -1.21
USP46-208ENST00000512656 IGHV1OR15-9A0A0B4J2B8 117 aa7.52□□□□□ -1.21
USP46-208ENST00000512656 TMEM8BA6NDV4 472 aa7.52□□□□□ -1.21
USP46-208ENST00000512656 PRRT4C9JH25 899 aa7.52□□□□□ -1.21
USP46-208ENST00000512656 H3BRJ5 948 aa7.52□□□□□ -1.21
USP46-208ENST00000512656 GIPC1O14908 333 aa7.52□□□□□ -1.21
USP46-208ENST00000512656 TRIM24O15164 1050 aa7.52□□□□□ -1.21
USP46-208ENST00000512656 OPHN1O60890 802 aa7.52□□□□□ -1.21
USP46-208ENST00000512656 STC2O76061 302 aa7.52□□□□□ -1.21
USP46-208ENST00000512656 PDGFAP04085 211 aa7.52□□□□□ -1.21
USP46-208ENST00000512656 PROS1P07225 676 aa7.52□□□□□ -1.21
USP46-208ENST00000512656 CISD3P0C7P0 127 aa7.52□□□□□ -1.21
USP46-208ENST00000512656 GNSP15586 552 aa7.52□□□□□ -1.21
USP46-208ENST00000512656 YWHAEP62258 255 aaKnown RBP7.52□□□□□ -1.21
USP46-208ENST00000512656 ZNF33AQ06730 810 aa7.52□□□□□ -1.21
USP46-208ENST00000512656 EFEMP1Q12805 493 aa7.52□□□□□ -1.21
USP46-208ENST00000512656 HNRNPDQ14103 355 aaKnown RBP7.52□□□□□ -1.21
USP46-208ENST00000512656 WDR45BQ5MNZ6 344 aa7.52□□□□□ -1.21
USP46-208ENST00000512656 KIAA1324Q6UXG2 1013 aaKnown RBP7.52□□□□□ -1.21
USP46-208ENST00000512656 KRBA2Q6ZNG9 492 aa7.52□□□□□ -1.21
USP46-208ENST00000512656 ACAD11Q709F0 780 aa7.52□□□□□ -1.21
USP46-208ENST00000512656 SCD5Q86SK9 330 aa7.52□□□□□ -1.21
USP46-208ENST00000512656 AGGF1Q8N302 714 aaeCLIP7.52□□□□□ -1.21
USP46-208ENST00000512656 FRMD1Q8N878 549 aa7.52□□□□□ -1.21
USP46-208ENST00000512656 FBXL13Q8NEE6 735 aa7.52□□□□□ -1.21
USP46-208ENST00000512656 DEFB124Q8NES8 71 aa7.52□□□□□ -1.21
USP46-208ENST00000512656 EDEM1Q92611 657 aa7.52□□□□□ -1.21
USP46-208ENST00000512656 TMEM176AQ96HP8 235 aa7.52□□□□□ -1.21
USP46-208ENST00000512656 GTPBP2Q9BX10 602 aaKnown RBP7.52□□□□□ -1.21
USP46-208ENST00000512656 GTPBP4Q9BZE4 634 aaKnown RBP7.52□□□□□ -1.21
USP46-208ENST00000512656 CISHQ9NSE2 258 aa7.52□□□□□ -1.21
USP46-208ENST00000512656 OLA1Q9NTK5 396 aaKnown RBP7.52□□□□□ -1.21
USP46-208ENST00000512656 TMEM74BQ9NUR3 256 aa7.52□□□□□ -1.21
USP46-208ENST00000512656 RMND1Q9NWS8 449 aa7.52□□□□□ -1.21
USP46-208ENST00000512656 OSER1Q9NX31 292 aa7.52□□□□□ -1.21
USP46-208ENST00000512656 RAB20Q9NX57 234 aa7.52□□□□□ -1.21
USP46-208ENST00000512656 CACNA2D2Q9NY47 1150 aa7.52□□□□□ -1.21
USP46-208ENST00000512656 RASAL2Q9UJF2 1139 aa7.52□□□□□ -1.21
USP46-208ENST00000512656 FBXO10Q9UK96 956 aa7.52□□□□□ -1.21
USP46-208ENST00000512656 NUDT5Q9UKK9 219 aa7.52□□□□□ -1.21
USP46-208ENST00000512656 CYP8B1Q9UNU6 501 aa7.52□□□□□ -1.21
USP46-208ENST00000512656 MAPK8IP1Q9UQF2 711 aa7.52□□□□□ -1.21
USP46-208ENST00000512656 SLC27A6Q9Y2P4 619 aa7.52□□□□□ -1.21
USP46-208ENST00000512656 ASCC3Q8N3C0 2202 aaKnown RBP7.52□□□□□ -1.21
USP46-208ENST00000512656 PI4KAP42356 2102 aa7.51□□□□□ -1.21
USP46-208ENST00000512656 H0Y626 953 aa7.51□□□□□ -1.21
USP46-208ENST00000512656 MDM4O15151 490 aa7.51□□□□□ -1.21
USP46-208ENST00000512656 TIMM44O43615 452 aa7.51□□□□□ -1.21
USP46-208ENST00000512656 SYNCRIPO60506 623 aaKnown RBP7.51□□□□□ -1.21
USP46-208ENST00000512656 ZNF202O95125 648 aa7.51□□□□□ -1.21
USP46-208ENST00000512656 TRIM16O95361 564 aa7.51□□□□□ -1.21
USP46-208ENST00000512656 ZBED1O96006 694 aa7.51□□□□□ -1.21
USP46-208ENST00000512656 PENKP01210 267 aaPredicted RBP7.51□□□□□ -1.21
USP46-208ENST00000512656 EPHA1P21709 976 aa7.51□□□□□ -1.21
USP46-208ENST00000512656 CES1P23141 567 aa7.51□□□□□ -1.21
USP46-208ENST00000512656 CD6P30203 668 aa7.51□□□□□ -1.21
USP46-208ENST00000512656 OXTRP30559 389 aa7.51□□□□□ -1.21
USP46-208ENST00000512656 CORO1AP31146 461 aaKnown RBP7.51□□□□□ -1.21
USP46-208ENST00000512656 HARS2P49590 506 aaKnown RBP7.51□□□□□ -1.21
USP46-208ENST00000512656 TKTL1P51854 596 aa7.51□□□□□ -1.21
USP46-208ENST00000512656 BCAT1P54687 386 aa7.51□□□□□ -1.21
USP46-208ENST00000512656 ZNF445P59923 1031 aa7.51□□□□□ -1.21
USP46-208ENST00000512656 YWHAGP61981 247 aaKnown RBP eCLIP7.51□□□□□ -1.21
USP46-208ENST00000512656 ARID5AQ03989 594 aa7.51□□□□□ -1.21
USP46-208ENST00000512656 SEMA3BQ13214 749 aa7.51□□□□□ -1.21
USP46-208ENST00000512656 SLC14A1Q13336 389 aa7.51□□□□□ -1.21
USP46-208ENST00000512656 EIF4HQ15056 248 aaKnown RBP7.51□□□□□ -1.21
USP46-208ENST00000512656 ZCWPW2Q504Y3 356 aa7.51□□□□□ -1.21
USP46-208ENST00000512656 ZNF394Q53GI3 561 aa7.51□□□□□ -1.21
USP46-208ENST00000512656 ARHGAP17Q68EM7 881 aa7.51□□□□□ -1.21
USP46-208ENST00000512656 UNQ6494/PRO21346Q6UXR6 183 aa7.51□□□□□ -1.21
USP46-208ENST00000512656 TOGARAM2Q6ZUX3 1019 aa7.51□□□□□ -1.21
USP46-208ENST00000512656 ANKS1BQ7Z6G8 1248 aa7.51□□□□□ -1.21
USP46-208ENST00000512656 ATCAYQ86WG3 371 aa7.51□□□□□ -1.21
USP46-208ENST00000512656 TRIML1Q8N9V2 468 aa7.51□□□□□ -1.21
USP46-208ENST00000512656 ANKRD52Q8NB46 1076 aa7.51□□□□□ -1.21
USP46-208ENST00000512656 SLC4A11Q8NBS3 891 aa7.51□□□□□ -1.21
USP46-208ENST00000512656 ZNF419Q96HQ0 510 aaPredicted RBP7.51□□□□□ -1.21
USP46-208ENST00000512656 MRGPRX1Q96LB2 322 aa7.51□□□□□ -1.21
USP46-208ENST00000512656 HSPA12BQ96MM6 686 aa7.51□□□□□ -1.21
USP46-208ENST00000512656 IPO9Q96P70 1041 aaKnown RBP7.51□□□□□ -1.21
USP46-208ENST00000512656 UBL7Q96S82 380 aaPredicted RBP7.51□□□□□ -1.21
USP46-208ENST00000512656 ACOX2Q99424 681 aa7.51□□□□□ -1.21
USP46-208ENST00000512656 TSG101Q99816 390 aa7.51□□□□□ -1.21
USP46-208ENST00000512656 SLC2A11Q9BYW1 496 aa7.51□□□□□ -1.21
USP46-208ENST00000512656 ZDHHC5Q9C0B5 715 aa7.51□□□□□ -1.21
USP46-208ENST00000512656 PRDM16Q9HAZ2 1276 aa7.51□□□□□ -1.21
USP46-208ENST00000512656 LRRC4Q9HBW1 653 aa7.51□□□□□ -1.21
USP46-208ENST00000512656 CAPN10Q9HC96 672 aa7.51□□□□□ -1.21
USP46-208ENST00000512656 PLK2Q9NYY3 685 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms