RNA–Protein interactions for RNA: ENST00000512531.1

MSH3-203, Transcript of mutS homolog 3, humanhuman

TSL 5

Gene MSH3, Length 531 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-203ENST00000512531 C18orf25Q96B23 403 aaPredicted RBP9.8□□□□□ -0.84
MSH3-203ENST00000512531 ZBTB9Q96C00 473 aa9.8□□□□□ -0.84
MSH3-203ENST00000512531 LRRC39Q96DD0 335 aa9.8□□□□□ -0.84
MSH3-203ENST00000512531 UROC1Q96N76 676 aa9.8□□□□□ -0.84
MSH3-203ENST00000512531 RNF157Q96PX1 679 aa9.8□□□□□ -0.84
MSH3-203ENST00000512531 TWNKQ96RR1 684 aa9.8□□□□□ -0.84
MSH3-203ENST00000512531 MRPL45Q9BRJ2 306 aaKnown RBP9.8□□□□□ -0.84
MSH3-203ENST00000512531 MED10Q9BTT4 135 aa9.8□□□□□ -0.84
MSH3-203ENST00000512531 CCDC134Q9H6E4 229 aa9.8□□□□□ -0.84
MSH3-203ENST00000512531 PSMC3IPQ9P2W1 217 aaPredicted RBP9.8□□□□□ -0.84
MSH3-203ENST00000512531 IPPQ9Y573 584 aa9.8□□□□□ -0.84
MSH3-203ENST00000512531 HCFC2Q9Y5Z7 792 aa9.8□□□□□ -0.84
MSH3-203ENST00000512531 RAD54BQ9Y620 910 aa9.8□□□□□ -0.84
MSH3-203ENST00000512531 IQANK1A0A1B0GTG1 560 aa9.79□□□□□ -0.84
MSH3-203ENST00000512531 SERTM1A2A2V5 107 aa9.79□□□□□ -0.84
MSH3-203ENST00000512531 A6NHS1 94 aa9.79□□□□□ -0.84
MSH3-203ENST00000512531 SHBGP04278 402 aa9.79□□□□□ -0.84
MSH3-203ENST00000512531 VIMP08670 466 aaKnown RBP9.79□□□□□ -0.84
MSH3-203ENST00000512531 FAM200BP0CF97 657 aa9.79□□□□□ -0.84
MSH3-203ENST00000512531 KRT15P19012 456 aa9.79□□□□□ -0.84
MSH3-203ENST00000512531 SLCO1A2P46721 670 aa9.79□□□□□ -0.84
MSH3-203ENST00000512531 GEMIN4P57678 1058 aaKnown RBP9.79□□□□□ -0.84
MSH3-203ENST00000512531 BASP1P80723 227 aaKnown RBP9.79□□□□□ -0.84
MSH3-203ENST00000512531 PDIA2Q13087 525 aaKnown RBP9.79□□□□□ -0.84
MSH3-203ENST00000512531 CLN3Q13286 438 aa9.79□□□□□ -0.84
MSH3-203ENST00000512531 ITIH4Q14624 930 aa9.79□□□□□ -0.84
MSH3-203ENST00000512531 NOMO1Q15155 1222 aa9.79□□□□□ -0.84
MSH3-203ENST00000512531 CDO1Q16878 200 aa9.79□□□□□ -0.84
MSH3-203ENST00000512531 LONRF1Q17RB8 773 aa9.79□□□□□ -0.84
MSH3-203ENST00000512531 KCNT1Q5JUK3 1230 aa9.79□□□□□ -0.84
MSH3-203ENST00000512531 CLLU1OSQ5K130 101 aa9.79□□□□□ -0.84
MSH3-203ENST00000512531 ATAT1Q5SQI0 421 aa9.79□□□□□ -0.84
MSH3-203ENST00000512531 RNASEH2BQ5TBB1 312 aaKnown RBP9.79□□□□□ -0.84
MSH3-203ENST00000512531 TTC19Q6DKK2 380 aaPredicted RBP9.79□□□□□ -0.84
MSH3-203ENST00000512531 OLFML1Q6UWY5 402 aa9.79□□□□□ -0.84
MSH3-203ENST00000512531 DSTYKQ6XUX3 929 aa9.79□□□□□ -0.84
MSH3-203ENST00000512531 DDX53Q86TM3 631 aaKnown RBP9.79□□□□□ -0.84
MSH3-203ENST00000512531 ZBED8Q8IZ13 594 aa9.79□□□□□ -0.84
MSH3-203ENST00000512531 EMC1Q8N766 993 aa9.79□□□□□ -0.84
MSH3-203ENST00000512531 GBP7Q8N8V2 638 aaPredicted RBP9.79□□□□□ -0.84
MSH3-203ENST00000512531 B3GALNT2Q8NCR0 500 aa9.79□□□□□ -0.84
MSH3-203ENST00000512531 EPS8L3Q8TE67 593 aaKnown RBP9.79□□□□□ -0.84
MSH3-203ENST00000512531 KCTD13Q8WZ19 329 aa9.79□□□□□ -0.84
MSH3-203ENST00000512531 FAF2Q96CS3 445 aa9.79□□□□□ -0.84
MSH3-203ENST00000512531 TMEM169Q96HH4 297 aa9.79□□□□□ -0.84
MSH3-203ENST00000512531 HNRNPABQ99729 332 aaKnown RBP9.79□□□□□ -0.84
MSH3-203ENST00000512531 TMEM121Q9BTD3 319 aa9.79□□□□□ -0.84
MSH3-203ENST00000512531 EIF2AQ9BY44 585 aaKnown RBP9.79□□□□□ -0.84
MSH3-203ENST00000512531 DUSP16Q9BY84 665 aa9.79□□□□□ -0.84
MSH3-203ENST00000512531 RHOBTB2Q9BYZ6 727 aa9.79□□□□□ -0.84
MSH3-203ENST00000512531 RASSF4Q9H2L5 321 aa9.79□□□□□ -0.84
MSH3-203ENST00000512531 NXF3Q9H4D5 531 aaKnown RBP9.79□□□□□ -0.84
MSH3-203ENST00000512531 POMKQ9H5K3 350 aa9.79□□□□□ -0.84
MSH3-203ENST00000512531 FAM49BQ9NUQ9 324 aa9.79□□□□□ -0.84
MSH3-203ENST00000512531 HCSTQ9UBK5 93 aa9.79□□□□□ -0.84
MSH3-203ENST00000512531 TUBGCP4Q9UGJ1 667 aa9.79□□□□□ -0.84
MSH3-203ENST00000512531 HMGXB4Q9UGU5 601 aa9.79□□□□□ -0.84
MSH3-203ENST00000512531 FAM169AQ9Y6X4 670 aa9.79□□□□□ -0.84
MSH3-203ENST00000512531 SPTBN4Q9H254 2564 aa9.79□□□□□ -0.84
MSH3-203ENST00000512531 CFAP54Q96N23 3096 aa9.79□□□□□ -0.84
MSH3-203ENST00000512531 BCLAF3A2AJT9 711 aaKnown RBP9.78□□□□□ -0.84
MSH3-203ENST00000512531 C3orf70A6NLC5 250 aaPredicted RBP9.78□□□□□ -0.84
MSH3-203ENST00000512531 C2CD4DB7Z1M9 353 aa9.78□□□□□ -0.84
MSH3-203ENST00000512531 RASA4BC9J798 803 aa9.78□□□□□ -0.84
MSH3-203ENST00000512531 AP3B1O00203 1094 aa9.78□□□□□ -0.84
MSH3-203ENST00000512531 CYB561D2O14569 222 aa9.78□□□□□ -0.84
MSH3-203ENST00000512531 CAPN9O14815 690 aa9.78□□□□□ -0.84
MSH3-203ENST00000512531 PPP1R12AO14974 1030 aaPredicted RBP9.78□□□□□ -0.84
MSH3-203ENST00000512531 MEFVO15553 781 aaPredicted RBP9.78□□□□□ -0.84
MSH3-203ENST00000512531 RASA4O43374 803 aa9.78□□□□□ -0.84
MSH3-203ENST00000512531 ZNF623O75123 536 aa9.78□□□□□ -0.84
MSH3-203ENST00000512531 DAB1O75553 588 aa9.78□□□□□ -0.84
MSH3-203ENST00000512531 ENDOD1O94919 500 aa9.78□□□□□ -0.84
MSH3-203ENST00000512531 CXCL14O95715 111 aa9.78□□□□□ -0.84
MSH3-203ENST00000512531 C1RP00736 705 aa9.78□□□□□ -0.84
MSH3-203ENST00000512531 F9P00740 461 aa9.78□□□□□ -0.84
MSH3-203ENST00000512531 CTSAP10619 480 aa9.78□□□□□ -0.84
MSH3-203ENST00000512531 ODC1P11926 461 aa9.78□□□□□ -0.84
MSH3-203ENST00000512531 BRAFP15056 766 aa9.78□□□□□ -0.84
MSH3-203ENST00000512531 PECAM1P16284 738 aaPredicted RBP9.78□□□□□ -0.84
MSH3-203ENST00000512531 AKAP5P24588 427 aa9.78□□□□□ -0.84
MSH3-203ENST00000512531 ADORA2BP29275 332 aa9.78□□□□□ -0.84
MSH3-203ENST00000512531 CHKAP35790 457 aa9.78□□□□□ -0.84
MSH3-203ENST00000512531 MATKP42679 507 aa9.78□□□□□ -0.84
MSH3-203ENST00000512531 MSH2P43246 934 aa9.78□□□□□ -0.84
MSH3-203ENST00000512531 MAGEA9P43362 315 aa9.78□□□□□ -0.84
MSH3-203ENST00000512531 RPL34P49207 117 aaKnown RBP9.78□□□□□ -0.84
MSH3-203ENST00000512531 RGS7P49802 495 aa9.78□□□□□ -0.84
MSH3-203ENST00000512531 CORO7P57737 925 aa9.78□□□□□ -0.84
MSH3-203ENST00000512531 LILRA4P59901 499 aa9.78□□□□□ -0.84
MSH3-203ENST00000512531 ATP11AP98196 1134 aa9.78□□□□□ -0.84
MSH3-203ENST00000512531 ORC1Q13415 861 aa9.78□□□□□ -0.84
MSH3-203ENST00000512531 DPYSL3Q14195 570 aa9.78□□□□□ -0.84
MSH3-203ENST00000512531 SPARCL1Q14515 664 aa9.78□□□□□ -0.84
MSH3-203ENST00000512531 DPYSL2Q16555 572 aa9.78□□□□□ -0.84
MSH3-203ENST00000512531 SOWAHAQ2M3V2 549 aa9.78□□□□□ -0.84
MSH3-203ENST00000512531 CCDC14Q49A88 953 aa9.78□□□□□ -0.84
MSH3-203ENST00000512531 ATP13A4Q4VNC1 1196 aa9.78□□□□□ -0.84
MSH3-203ENST00000512531 CCDC38Q502W7 563 aa9.78□□□□□ -0.84
MSH3-203ENST00000512531 PKDCCQ504Y2 493 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms