RNA–Protein interactions for RNA: ENST00000511316.1

HMGB2-205, Transcript of high mobility group box 2, humanhuman

TSL 2

Gene HMGB2, Length 1,841 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-205ENST00000511316 TMEM175Q9BSA9 504 aa13.22□□□□□ -0.29
HMGB2-205ENST00000511316 KLC2Q9H0B6 622 aa13.22□□□□□ -0.29
HMGB2-205ENST00000511316 PRDM16Q9HAZ2 1276 aa13.22□□□□□ -0.29
HMGB2-205ENST00000511316 KCNK13Q9HB14 408 aa13.22□□□□□ -0.29
HMGB2-205ENST00000511316 DLGAP2Q9P1A6 1054 aa13.22□□□□□ -0.29
HMGB2-205ENST00000511316 TEX264Q9Y6I9 313 aa13.22□□□□□ -0.29
HMGB2-205ENST00000511316 TCRBV9S1A1TA0A576 114 aa13.21□□□□□ -0.29
HMGB2-205ENST00000511316 KLHL33A6NCF5 533 aa13.21□□□□□ -0.29
HMGB2-205ENST00000511316 ANKRD33BA6NCL7 494 aa13.21□□□□□ -0.29
HMGB2-205ENST00000511316 SKAP2O75563 359 aaPredicted RBP13.21□□□□□ -0.29
HMGB2-205ENST00000511316 PDHA1P08559 390 aa13.21□□□□□ -0.29
HMGB2-205ENST00000511316 RBP3P10745 1247 aa13.21□□□□□ -0.29
HMGB2-205ENST00000511316 TGM2P21980 687 aa13.21□□□□□ -0.29
HMGB2-205ENST00000511316 PRKCHP24723 683 aa13.21□□□□□ -0.29
HMGB2-205ENST00000511316 SNX16P57768 344 aa13.21□□□□□ -0.29
HMGB2-205ENST00000511316 ACTR3P61158 418 aa13.21□□□□□ -0.29
HMGB2-205ENST00000511316 PDK2Q15119 407 aa13.21□□□□□ -0.29
HMGB2-205ENST00000511316 FNBP1LQ5T0N5 605 aa13.21□□□□□ -0.29
HMGB2-205ENST00000511316 OR52E8Q6IFG1 317 aa13.21□□□□□ -0.29
HMGB2-205ENST00000511316 SH2D5Q6ZV89 423 aa13.21□□□□□ -0.29
HMGB2-205ENST00000511316 DDX53Q86TM3 631 aaKnown RBP13.21□□□□□ -0.29
HMGB2-205ENST00000511316 ZC3H18Q86VM9 953 aaKnown RBP13.21□□□□□ -0.29
HMGB2-205ENST00000511316 RFX6Q8HWS3 928 aa13.21□□□□□ -0.29
HMGB2-205ENST00000511316 WDR75Q8IWA0 830 aaKnown RBP13.21□□□□□ -0.29
HMGB2-205ENST00000511316 GATA6Q92908 595 aa13.21□□□□□ -0.29
HMGB2-205ENST00000511316 E2F7Q96AV8 911 aa13.21□□□□□ -0.29
HMGB2-205ENST00000511316 IFT43Q96FT9 208 aa13.21□□□□□ -0.29
HMGB2-205ENST00000511316 TCHPQ9BT92 498 aa13.21□□□□□ -0.29
HMGB2-205ENST00000511316 TRIM4Q9C037 500 aa13.21□□□□□ -0.29
HMGB2-205ENST00000511316 CISHQ9NSE2 258 aa13.21□□□□□ -0.29
HMGB2-205ENST00000511316 SIRPGQ9P1W8 387 aa13.21□□□□□ -0.29
HMGB2-205ENST00000511316 CPSF3Q9UKF6 684 aaKnown RBP13.21□□□□□ -0.29
HMGB2-205ENST00000511316 PLLPQ9Y342 182 aa13.21□□□□□ -0.29
HMGB2-205ENST00000511316 CAPN14A8MX76 684 aa13.2□□□□□ -0.3
HMGB2-205ENST00000511316 LRCH4O75427 683 aa13.2□□□□□ -0.3
HMGB2-205ENST00000511316 TNNC2P02585 160 aa13.2□□□□□ -0.3
HMGB2-205ENST00000511316 THP07101 528 aa13.2□□□□□ -0.3
HMGB2-205ENST00000511316 ETS1P14921 441 aa13.2□□□□□ -0.3
HMGB2-205ENST00000511316 KCNE1P15382 129 aa13.2□□□□□ -0.3
HMGB2-205ENST00000511316 CRABP2P29373 138 aa13.2□□□□□ -0.3
HMGB2-205ENST00000511316 ACOT2P49753 483 aa13.2□□□□□ -0.3
HMGB2-205ENST00000511316 YWHAGP61981 247 aaKnown RBP eCLIP13.2□□□□□ -0.3
HMGB2-205ENST00000511316 BASP1P80723 227 aaKnown RBP13.2□□□□□ -0.3
HMGB2-205ENST00000511316 DLX2Q07687 328 aaPredicted RBP13.2□□□□□ -0.3
HMGB2-205ENST00000511316 KCNJ11Q14654 390 aa13.2□□□□□ -0.3
HMGB2-205ENST00000511316 NOMO1Q15155 1222 aa13.2□□□□□ -0.3
HMGB2-205ENST00000511316 SPOPLQ6IQ16 392 aa13.2□□□□□ -0.3
HMGB2-205ENST00000511316 DSTYKQ6XUX3 929 aa13.2□□□□□ -0.3
HMGB2-205ENST00000511316 TIFABQ6ZNK6 161 aa13.2□□□□□ -0.3
HMGB2-205ENST00000511316 CAPN12Q6ZSI9 719 aa13.2□□□□□ -0.3
HMGB2-205ENST00000511316 HOMEZQ8IX15 550 aa13.2□□□□□ -0.3
HMGB2-205ENST00000511316 MRPL43Q8N983 215 aaKnown RBP13.2□□□□□ -0.3
HMGB2-205ENST00000511316 URGCPQ8TCY9 931 aa13.2□□□□□ -0.3
HMGB2-205ENST00000511316 ATP2A3Q93084 1043 aa13.2□□□□□ -0.3
HMGB2-205ENST00000511316 TTC17Q96AE7 1141 aa13.2□□□□□ -0.3
HMGB2-205ENST00000511316 SNX27Q96L92 541 aa13.2□□□□□ -0.3
HMGB2-205ENST00000511316 ACAP3Q96P50 834 aa13.2□□□□□ -0.3
HMGB2-205ENST00000511316 FAM111AQ96PZ2 611 aa13.2□□□□□ -0.3
HMGB2-205ENST00000511316 SRPK1Q96SB4 655 aaKnown RBP13.2□□□□□ -0.3
HMGB2-205ENST00000511316 SYT15Q9BQS2 421 aa13.2□□□□□ -0.3
HMGB2-205ENST00000511316 GPR62Q9BZJ7 368 aa13.2□□□□□ -0.3
HMGB2-205ENST00000511316 NSUN3Q9H649 340 aaKnown RBP13.2□□□□□ -0.3
HMGB2-205ENST00000511316 TLR9Q9NR96 1032 aa13.2□□□□□ -0.3
HMGB2-205ENST00000511316 ZDHHC7Q9NXF8 308 aa13.2□□□□□ -0.3
HMGB2-205ENST00000511316 SLC17A7Q9P2U7 560 aa13.2□□□□□ -0.3
HMGB2-205ENST00000511316 IRAK3Q9Y616 596 aa13.2□□□□□ -0.3
HMGB2-205ENST00000511316 B2RBV5 119 aa13.2□□□□□ -0.3
HMGB2-205ENST00000511316 OGTO15294 1046 aa13.2□□□□□ -0.3
HMGB2-205ENST00000511316 TBX10O75333 385 aa13.2□□□□□ -0.3
HMGB2-205ENST00000511316 P4HA1P13674 534 aa13.2□□□□□ -0.3
HMGB2-205ENST00000511316 AOC1P19801 751 aa13.2□□□□□ -0.3
HMGB2-205ENST00000511316 CRHR1P34998 444 aa13.2□□□□□ -0.3
HMGB2-205ENST00000511316 PPM1AP35813 382 aa13.2□□□□□ -0.3
HMGB2-205ENST00000511316 ELK3P41970 407 aa13.2□□□□□ -0.3
HMGB2-205ENST00000511316 CACNA2D1P54289 1103 aa13.2□□□□□ -0.3
HMGB2-205ENST00000511316 WNT7BP56706 349 aa13.2□□□□□ -0.3
HMGB2-205ENST00000511316 TMPRSS15P98073 1019 aa13.2□□□□□ -0.3
HMGB2-205ENST00000511316 TFF2Q03403 129 aa13.2□□□□□ -0.3
HMGB2-205ENST00000511316 TUSC3Q13454 348 aa13.2□□□□□ -0.3
HMGB2-205ENST00000511316 TMEM132AQ24JP5 1023 aa13.2□□□□□ -0.3
HMGB2-205ENST00000511316 ATP13A4Q4VNC1 1196 aa13.2□□□□□ -0.3
HMGB2-205ENST00000511316 GLRA4Q5JXX5 417 aa13.2□□□□□ -0.3
HMGB2-205ENST00000511316 SDCCAG8Q86SQ7 713 aaPredicted RBP13.2□□□□□ -0.3
HMGB2-205ENST00000511316 CCNJLQ8IV13 435 aa13.2□□□□□ -0.3
HMGB2-205ENST00000511316 ST13P4Q8IZP2 240 aaPredicted RBP13.2□□□□□ -0.3
HMGB2-205ENST00000511316 C3orf58Q8NDZ4 430 aa13.2□□□□□ -0.3
HMGB2-205ENST00000511316 VN1R2Q8NFZ6 395 aa13.2□□□□□ -0.3
HMGB2-205ENST00000511316 TBCBQ99426 244 aa13.2□□□□□ -0.3
HMGB2-205ENST00000511316 ZBP1Q9H171 429 aa13.2□□□□□ -0.3
HMGB2-205ENST00000511316 GOLGA2P5Q9HBQ8 144 aa13.2□□□□□ -0.3
HMGB2-205ENST00000511316 DMAP1Q9NPF5 467 aaPredicted RBP13.2□□□□□ -0.3
HMGB2-205ENST00000511316 KLHL11Q9NVR0 708 aa13.2□□□□□ -0.3
HMGB2-205ENST00000511316 THAP1Q9NVV9 213 aa13.2□□□□□ -0.3
HMGB2-205ENST00000511316 ETAA1Q9NY74 926 aa13.2□□□□□ -0.3
HMGB2-205ENST00000511316 SOX13Q9UN79 622 aa13.2□□□□□ -0.3
HMGB2-205ENST00000511316 GOLGA8SH3BPF8 625 aa13.19□□□□□ -0.3
HMGB2-205ENST00000511316 GOLGA8MH3BSY2 632 aa13.19□□□□□ -0.3
HMGB2-205ENST00000511316 KRT36O76013 467 aa13.19□□□□□ -0.3
HMGB2-205ENST00000511316 IL18RAPO95256 599 aa13.19□□□□□ -0.3
HMGB2-205ENST00000511316 GLP2RO95838 553 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms