RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 CUL4AQ13619 759 aa5.93□□□□□ -1.46
HMGB1P47-201ENST00000511281 AARS2Q5JTZ9 985 aaKnown RBP5.93□□□□□ -1.46
HMGB1P47-201ENST00000511281 KRT77Q7Z794 578 aa5.93□□□□□ -1.46
HMGB1P47-201ENST00000511281 RUFY2Q8WXA3 655 aa5.93□□□□□ -1.46
HMGB1P47-201ENST00000511281 RAB40AQ8WXH6 277 aa5.93□□□□□ -1.46
HMGB1P47-201ENST00000511281 NCSTNQ92542 709 aa5.93□□□□□ -1.46
HMGB1P47-201ENST00000511281 AKAP1Q92667 903 aaKnown RBP eCLIP5.93□□□□□ -1.46
HMGB1P47-201ENST00000511281 HAS1Q92839 578 aa5.93□□□□□ -1.46
HMGB1P47-201ENST00000511281 EXTL1Q92935 676 aa5.93□□□□□ -1.46
HMGB1P47-201ENST00000511281 CUL5Q93034 780 aa5.93□□□□□ -1.46
HMGB1P47-201ENST00000511281 ATP2A3Q93084 1043 aa5.93□□□□□ -1.46
HMGB1P47-201ENST00000511281 C1QTNF3Q9BXJ4 246 aa5.93□□□□□ -1.46
HMGB1P47-201ENST00000511281 KRTAP3-1Q9BYR8 98 aa5.93□□□□□ -1.46
HMGB1P47-201ENST00000511281 CTDSP1Q9GZU7 261 aa5.93□□□□□ -1.46
HMGB1P47-201ENST00000511281 RANBP17Q9H2T7 1088 aaKnown RBP5.93□□□□□ -1.46
HMGB1P47-201ENST00000511281 ANKEF1Q9NU02 776 aa5.93□□□□□ -1.46
HMGB1P47-201ENST00000511281 MPP6Q9NZW5 540 aa5.93□□□□□ -1.46
HMGB1P47-201ENST00000511281 CAMK2AQ9UQM7 478 aa5.93□□□□□ -1.46
HMGB1P47-201ENST00000511281 B3GNT3Q9Y2A9 372 aa5.93□□□□□ -1.46
HMGB1P47-201ENST00000511281 RSF1Q96T23 1441 aaPredicted RBP5.92□□□□□ -1.46
HMGB1P47-201ENST00000511281 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.92□□□□□ -1.46
HMGB1P47-201ENST00000511281 C17orf100A8MU93 164 aa5.92□□□□□ -1.46
HMGB1P47-201ENST00000511281 TTC34A8MYJ7 566 aa5.92□□□□□ -1.46
HMGB1P47-201ENST00000511281 GTPBP1O00178 669 aaKnown RBP5.92□□□□□ -1.46
HMGB1P47-201ENST00000511281 PRYO14603 147 aa5.92□□□□□ -1.46
HMGB1P47-201ENST00000511281 AHCYL1O43865 530 aa5.92□□□□□ -1.46
HMGB1P47-201ENST00000511281 ORC4O43929 436 aa5.92□□□□□ -1.46
HMGB1P47-201ENST00000511281 URODP06132 367 aa5.92□□□□□ -1.46
HMGB1P47-201ENST00000511281 LYL1P12980 280 aa5.92□□□□□ -1.46
HMGB1P47-201ENST00000511281 CYP4B1P13584 511 aa5.92□□□□□ -1.46
HMGB1P47-201ENST00000511281 ATF7P17544 494 aaPredicted RBP5.92□□□□□ -1.46
HMGB1P47-201ENST00000511281 NDUFS1P28331 727 aa5.92□□□□□ -1.46
HMGB1P47-201ENST00000511281 CYP2C18P33260 490 aa5.92□□□□□ -1.46
HMGB1P47-201ENST00000511281 ABCD1P33897 745 aa5.92□□□□□ -1.46
HMGB1P47-201ENST00000511281 ARL3P36405 182 aa5.92□□□□□ -1.46
HMGB1P47-201ENST00000511281 SLC37A1P57057 533 aa5.92□□□□□ -1.46
HMGB1P47-201ENST00000511281 WDR5P61964 334 aaKnown RBP5.92□□□□□ -1.46
HMGB1P47-201ENST00000511281 ARHGAP8P85298 464 aa5.92□□□□□ -1.46
HMGB1P47-201ENST00000511281 B4GALNT1Q00973 533 aa5.92□□□□□ -1.46
HMGB1P47-201ENST00000511281 GAB1Q13480 694 aa5.92□□□□□ -1.46
HMGB1P47-201ENST00000511281 GXYLT1Q4G148 440 aa5.92□□□□□ -1.46
HMGB1P47-201ENST00000511281 USP39Q53GS9 565 aaKnown RBP5.92□□□□□ -1.46
HMGB1P47-201ENST00000511281 KAZNQ674X7 775 aa5.92□□□□□ -1.46
HMGB1P47-201ENST00000511281 KIRREL2Q6UWL6 708 aa5.92□□□□□ -1.46
HMGB1P47-201ENST00000511281 Q6ZNX1 250 aa5.92□□□□□ -1.46
HMGB1P47-201ENST00000511281 RNF207Q6ZRF8 634 aa5.92□□□□□ -1.46
HMGB1P47-201ENST00000511281 RTL10Q7L3V2 364 aa5.92□□□□□ -1.46
HMGB1P47-201ENST00000511281 CPLX4Q7Z7G2 160 aa5.92□□□□□ -1.46
HMGB1P47-201ENST00000511281 MON1AQ86VX9 555 aa5.92□□□□□ -1.46
HMGB1P47-201ENST00000511281 NOC3LQ8WTT2 800 aaKnown RBP5.92□□□□□ -1.46
HMGB1P47-201ENST00000511281 USP6NLQ92738 828 aa5.92□□□□□ -1.46
HMGB1P47-201ENST00000511281 P2RY11Q96G91 374 aa5.92□□□□□ -1.46
HMGB1P47-201ENST00000511281 COQ10AQ96MF6 247 aa5.92□□□□□ -1.46
HMGB1P47-201ENST00000511281 EYA3Q99504 573 aa5.92□□□□□ -1.46
HMGB1P47-201ENST00000511281 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.92□□□□□ -1.46
HMGB1P47-201ENST00000511281 NPLQ9BXD5 320 aaPredicted RBP5.92□□□□□ -1.46
HMGB1P47-201ENST00000511281 USP29Q9HBJ7 922 aa5.92□□□□□ -1.46
HMGB1P47-201ENST00000511281 SYBUQ9NX95 663 aa5.92□□□□□ -1.46
HMGB1P47-201ENST00000511281 HDAC6Q9UBN7 1215 aa5.92□□□□□ -1.46
HMGB1P47-201ENST00000511281 PKP3Q9Y446 797 aa5.92□□□□□ -1.46
HMGB1P47-201ENST00000511281 SIRT4Q9Y6E7 314 aaPredicted RBP5.92□□□□□ -1.46
HMGB1P47-201ENST00000511281 SPATA31A5Q5VU36 1347 aa5.92□□□□□ -1.46
HMGB1P47-201ENST00000511281 SPATA31A6Q5VVP1 1343 aa5.92□□□□□ -1.46
HMGB1P47-201ENST00000511281 SPATA31A7Q8IWB4 1347 aa5.92□□□□□ -1.46
HMGB1P47-201ENST00000511281 PASKQ96RG2 1323 aa5.92□□□□□ -1.46
HMGB1P47-201ENST00000511281 AGAP14A8MT82 685 aa5.91□□□□□ -1.46
HMGB1P47-201ENST00000511281 TGFB1I1O43294 461 aa5.91□□□□□ -1.46
HMGB1P47-201ENST00000511281 CCNT1O60563 726 aaKnown RBP5.91□□□□□ -1.46
HMGB1P47-201ENST00000511281 CHRM4P08173 479 aa5.91□□□□□ -1.46
HMGB1P47-201ENST00000511281 HOXB9P17482 250 aaPredicted RBP5.91□□□□□ -1.46
HMGB1P47-201ENST00000511281 FPR3P25089 353 aa5.91□□□□□ -1.46
HMGB1P47-201ENST00000511281 STAT6P42226 847 aa5.91□□□□□ -1.46
HMGB1P47-201ENST00000511281 GRIA3P42263 894 aa5.91□□□□□ -1.46
HMGB1P47-201ENST00000511281 ZNF84P51523 738 aa5.91□□□□□ -1.46
HMGB1P47-201ENST00000511281 RARSP54136 660 aaKnown RBP5.91□□□□□ -1.46
HMGB1P47-201ENST00000511281 ADPRHP54922 357 aa5.91□□□□□ -1.46
HMGB1P47-201ENST00000511281 RPS3AP61247 264 aaKnown RBP5.91□□□□□ -1.46
HMGB1P47-201ENST00000511281 RPL7AP62424 266 aaKnown RBP5.91□□□□□ -1.46
HMGB1P47-201ENST00000511281 DMWDQ09019 674 aa5.91□□□□□ -1.46
HMGB1P47-201ENST00000511281 BYSLQ13895 437 aaKnown RBP5.91□□□□□ -1.46
HMGB1P47-201ENST00000511281 NAA25Q14CX7 972 aa5.91□□□□□ -1.46
HMGB1P47-201ENST00000511281 CDSNQ15517 529 aa5.91□□□□□ -1.46
HMGB1P47-201ENST00000511281 MTFR2Q6P444 385 aa5.91□□□□□ -1.46
HMGB1P47-201ENST00000511281 SLC22A25Q6T423 547 aa5.91□□□□□ -1.46
HMGB1P47-201ENST00000511281 MRGPREQ86SM8 312 aa5.91□□□□□ -1.46
HMGB1P47-201ENST00000511281 CHST13Q8NET6 341 aa5.91□□□□□ -1.46
HMGB1P47-201ENST00000511281 LINC00476Q8WZB0 136 aa5.91□□□□□ -1.46
HMGB1P47-201ENST00000511281 TFAP2BQ92481 460 aa5.91□□□□□ -1.46
HMGB1P47-201ENST00000511281 TBC1D5Q92609 795 aa5.91□□□□□ -1.46
HMGB1P47-201ENST00000511281 HDHD5Q9BXW7 423 aa5.91□□□□□ -1.46
HMGB1P47-201ENST00000511281 EPHX3Q9H6B9 360 aa5.91□□□□□ -1.46
HMGB1P47-201ENST00000511281 SYNCQ9H7C4 482 aa5.91□□□□□ -1.46
HMGB1P47-201ENST00000511281 TTC12Q9H892 705 aaPredicted RBP5.91□□□□□ -1.46
HMGB1P47-201ENST00000511281 ANKFY1Q9P2R3 1169 aa5.91□□□□□ -1.46
HMGB1P47-201ENST00000511281 CCNL1Q9UK58 526 aaPredicted RBP5.91□□□□□ -1.46
HMGB1P47-201ENST00000511281 TSC22D4Q9Y3Q8 395 aa5.91□□□□□ -1.46
HMGB1P47-201ENST00000511281 LYVE1Q9Y5Y7 322 aa5.91□□□□□ -1.46
HMGB1P47-201ENST00000511281 RUSC2Q8N2Y8 1516 aa5.9□□□□□ -1.46
HMGB1P47-201ENST00000511281 K7ESM1 405 aa5.9□□□□□ -1.46
HMGB1P47-201ENST00000511281 SEC14L2O76054 403 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms