RNA–Protein interactions for RNA: ENST00000511019.1

TRIO-217, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 430 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-217ENST00000511019 RNF25Q96BH1 459 aaPredicted RBP8.63□□□□□ -1.03
TRIO-217ENST00000511019 FAM149B1Q96BN6 582 aa8.63□□□□□ -1.03
TRIO-217ENST00000511019 MYO19Q96H55 970 aa8.63□□□□□ -1.03
TRIO-217ENST00000511019 SLC39A13Q96H72 371 aa8.63□□□□□ -1.03
TRIO-217ENST00000511019 MRGPRX3Q96LB0 322 aa8.63□□□□□ -1.03
TRIO-217ENST00000511019 SLC6A18Q96N87 628 aa8.63□□□□□ -1.03
TRIO-217ENST00000511019 FAM129BQ96TA1 746 aa8.63□□□□□ -1.03
TRIO-217ENST00000511019 ELF4Q99607 663 aaPredicted RBP8.63□□□□□ -1.03
TRIO-217ENST00000511019 AASDHPPTQ9NRN7 309 aa8.63□□□□□ -1.03
TRIO-217ENST00000511019 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.63□□□□□ -1.03
TRIO-217ENST00000511019 DKK4Q9UBT3 224 aa8.63□□□□□ -1.03
TRIO-217ENST00000511019 TJP2Q9UDY2 1190 aa8.63□□□□□ -1.03
TRIO-217ENST00000511019 FTSJ1Q9UET6 329 aa8.63□□□□□ -1.03
TRIO-217ENST00000511019 ADAMTS1Q9UHI8 967 aa8.63□□□□□ -1.03
TRIO-217ENST00000511019 SLCO3A1Q9UIG8 710 aa8.63□□□□□ -1.03
TRIO-217ENST00000511019 FZD4Q9ULV1 537 aa8.63□□□□□ -1.03
TRIO-217ENST00000511019 RAXQ9Y2V3 346 aa8.63□□□□□ -1.03
TRIO-217ENST00000511019 PI4KAP42356 2102 aa8.62□□□□□ -1.03
TRIO-217ENST00000511019 TBC1D3DA0A087WVF3 549 aa8.62□□□□□ -1.03
TRIO-217ENST00000511019 TBC1D3IA0A087WXS9 549 aa8.62□□□□□ -1.03
TRIO-217ENST00000511019 TBC1D3EA0A087X179 549 aa8.62□□□□□ -1.03
TRIO-217ENST00000511019 TBC1D3KA0A087X1G2 549 aa8.62□□□□□ -1.03
TRIO-217ENST00000511019 EDDM13A0A1B0GTR0 161 aa8.62□□□□□ -1.03
TRIO-217ENST00000511019 FAM149AA5PLN7 773 aa8.62□□□□□ -1.03
TRIO-217ENST00000511019 TBC1D3FA6NER0 549 aaPredicted RBP8.62□□□□□ -1.03
TRIO-217ENST00000511019 TBC1D3LB9A6J9 549 aa8.62□□□□□ -1.03
TRIO-217ENST00000511019 E9PAM4 449 aa8.62□□□□□ -1.03
TRIO-217ENST00000511019 PAPSS1O43252 624 aaPredicted RBP8.62□□□□□ -1.03
TRIO-217ENST00000511019 GNA14O95837 355 aa8.62□□□□□ -1.03
TRIO-217ENST00000511019 IL1BP01584 269 aa8.62□□□□□ -1.03
TRIO-217ENST00000511019 TBC1D3HP0C7X1 549 aa8.62□□□□□ -1.03
TRIO-217ENST00000511019 CDK4P11802 303 aa8.62□□□□□ -1.03
TRIO-217ENST00000511019 KRT5P13647 590 aa8.62□□□□□ -1.03
TRIO-217ENST00000511019 JUPP14923 745 aa8.62□□□□□ -1.03
TRIO-217ENST00000511019 GOT1P17174 413 aa8.62□□□□□ -1.03
TRIO-217ENST00000511019 ABCB4P21439 1286 aa8.62□□□□□ -1.03
TRIO-217ENST00000511019 TACR2P21452 398 aa8.62□□□□□ -1.03
TRIO-217ENST00000511019 CTSOP43234 321 aaPredicted RBP8.62□□□□□ -1.03
TRIO-217ENST00000511019 RPL34P49207 117 aaKnown RBP8.62□□□□□ -1.03
TRIO-217ENST00000511019 CCR5P51681 352 aa8.62□□□□□ -1.03
TRIO-217ENST00000511019 YWHAZP63104 245 aaKnown RBP8.62□□□□□ -1.03
TRIO-217ENST00000511019 GCNT1Q02742 428 aa8.62□□□□□ -1.03
TRIO-217ENST00000511019 KCNH2Q12809 1159 aa8.62□□□□□ -1.03
TRIO-217ENST00000511019 NNTQ13423 1086 aa8.62□□□□□ -1.03
TRIO-217ENST00000511019 CAMK2BQ13554 666 aa8.62□□□□□ -1.03
TRIO-217ENST00000511019 SLC12A1Q13621 1099 aa8.62□□□□□ -1.03
TRIO-217ENST00000511019 ZC3H12AQ5D1E8 599 aaKnown RBP8.62□□□□□ -1.03
TRIO-217ENST00000511019 RAP1GAP2Q684P5 730 aa8.62□□□□□ -1.03
TRIO-217ENST00000511019 TBC1D3GQ6DHY5 549 aa8.62□□□□□ -1.03
TRIO-217ENST00000511019 TBC1D3CQ6IPX1 549 aa8.62□□□□□ -1.03
TRIO-217ENST00000511019 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.62□□□□□ -1.03
TRIO-217ENST00000511019 PRPF39Q86UA1 669 aaKnown RBP8.62□□□□□ -1.03
TRIO-217ENST00000511019 TMPRSS12Q86WS5 348 aa8.62□□□□□ -1.03
TRIO-217ENST00000511019 GATAD2AQ86YP4 633 aa8.62□□□□□ -1.03
TRIO-217ENST00000511019 ARHGEF19Q8IW93 802 aa8.62□□□□□ -1.03
TRIO-217ENST00000511019 TBC1D3Q8IZP1 549 aaPredicted RBP8.62□□□□□ -1.03
TRIO-217ENST00000511019 APCDD1Q8J025 514 aa8.62□□□□□ -1.03
TRIO-217ENST00000511019 STK40Q8N2I9 435 aa8.62□□□□□ -1.03
TRIO-217ENST00000511019 ATP6V0D2Q8N8Y2 350 aa8.62□□□□□ -1.03
TRIO-217ENST00000511019 OR14C36Q8NHC7 312 aa8.62□□□□□ -1.03
TRIO-217ENST00000511019 ADAM32Q8TC27 787 aa8.62□□□□□ -1.03
TRIO-217ENST00000511019 PTPRN2Q92932 1015 aa8.62□□□□□ -1.03
TRIO-217ENST00000511019 MYEOVQ96EZ4 313 aa8.62□□□□□ -1.03
TRIO-217ENST00000511019 LRIG1Q96JA1 1093 aa8.62□□□□□ -1.03
TRIO-217ENST00000511019 BTN2A3PQ96KV6 586 aa8.62□□□□□ -1.03
TRIO-217ENST00000511019 RPL10LQ96L21 214 aaKnown RBP8.62□□□□□ -1.03
TRIO-217ENST00000511019 PRICKLE1Q96MT3 831 aaPredicted RBP8.62□□□□□ -1.03
TRIO-217ENST00000511019 MED15Q96RN5 788 aa8.62□□□□□ -1.03
TRIO-217ENST00000511019 PPP1R9BQ96SB3 815 aa8.62□□□□□ -1.03
TRIO-217ENST00000511019 SLC4A5Q9BY07 1137 aa8.62□□□□□ -1.03
TRIO-217ENST00000511019 NUCKS1Q9H1E3 243 aaKnown RBP8.62□□□□□ -1.03
TRIO-217ENST00000511019 THAP9Q9H5L6 903 aa8.62□□□□□ -1.03
TRIO-217ENST00000511019 EBF2Q9HAK2 575 aa8.62□□□□□ -1.03
TRIO-217ENST00000511019 UBE2TQ9NPD8 197 aaPredicted RBP8.62□□□□□ -1.03
TRIO-217ENST00000511019 SCUBE2Q9NQ36 999 aa8.62□□□□□ -1.03
TRIO-217ENST00000511019 GDF3Q9NR23 364 aa8.62□□□□□ -1.03
TRIO-217ENST00000511019 SERGEFQ9UGK8 458 aa8.62□□□□□ -1.03
TRIO-217ENST00000511019 TPX2Q9ULW0 747 aaKnown RBP8.62□□□□□ -1.03
TRIO-217ENST00000511019 PCDHGA1Q9Y5H4 931 aa8.62□□□□□ -1.03
TRIO-217ENST00000511019 GON4LQ3T8J9 2241 aa8.62□□□□□ -1.03
TRIO-217ENST00000511019 ZFHX4Q86UP3 3567 aa8.61□□□□□ -1.03
TRIO-217ENST00000511019 USP24Q9UPU5 2620 aa8.61□□□□□ -1.03
TRIO-217ENST00000511019 CHD8Q9HCK8 2581 aa8.61□□□□□ -1.03
TRIO-217ENST00000511019 BICDL2A1A5D9 508 aa8.61□□□□□ -1.03
TRIO-217ENST00000511019 KCNU1A8MYU2 1149 aa8.61□□□□□ -1.03
TRIO-217ENST00000511019 F5H5T6 163 aa8.61□□□□□ -1.03
TRIO-217ENST00000511019 TLR4O00206 839 aa8.61□□□□□ -1.03
TRIO-217ENST00000511019 ENC1O14682 589 aa8.61□□□□□ -1.03
TRIO-217ENST00000511019 LETM1O95202 739 aaPredicted RBP8.61□□□□□ -1.03
TRIO-217ENST00000511019 TRUB2O95900 331 aaKnown RBP8.61□□□□□ -1.03
TRIO-217ENST00000511019 ADH1BP00325 375 aa8.61□□□□□ -1.03
TRIO-217ENST00000511019 WNT1P04628 370 aa8.61□□□□□ -1.03
TRIO-217ENST00000511019 C1SP09871 688 aa8.61□□□□□ -1.03
TRIO-217ENST00000511019 ARRB1P49407 418 aaPredicted RBP8.61□□□□□ -1.03
TRIO-217ENST00000511019 PLK1P53350 603 aa8.61□□□□□ -1.03
TRIO-217ENST00000511019 OXCT1P55809 520 aa8.61□□□□□ -1.03
TRIO-217ENST00000511019 SULT2A1Q06520 285 aa8.61□□□□□ -1.03
TRIO-217ENST00000511019 KCNJ12Q14500 433 aa8.61□□□□□ -1.03
TRIO-217ENST00000511019 ACCSLQ4AC99 568 aa8.61□□□□□ -1.03
TRIO-217ENST00000511019 SOWAHCQ53LP3 525 aaPredicted RBP8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms