RNA–Protein interactions for RNA: ENST00000509876.5

PHF3-210, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 7,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-210ENST00000509876 XYLT1Q86Y38 959 aa5.25□□□□□ -1.57
PHF3-210ENST00000509876 TBC1D3Q8IZP1 549 aaPredicted RBP5.25□□□□□ -1.57
PHF3-210ENST00000509876 CXorf38Q8TB03 319 aa5.25□□□□□ -1.57
PHF3-210ENST00000509876 ZNF669Q96BR6 464 aaPredicted RBP5.25□□□□□ -1.57
PHF3-210ENST00000509876 TRIM45Q9H8W5 580 aaPredicted RBP5.25□□□□□ -1.57
PHF3-210ENST00000509876 CD274Q9NZQ7 290 aa5.25□□□□□ -1.57
PHF3-210ENST00000509876 LZTS1Q9Y250 596 aa5.25□□□□□ -1.57
PHF3-210ENST00000509876 A0A1B0GVM2 712 aa5.25□□□□□ -1.57
PHF3-210ENST00000509876 TCAF2A6NFQ2 919 aa5.25□□□□□ -1.57
PHF3-210ENST00000509876 LRRC10BA6NIK2 292 aa5.25□□□□□ -1.57
PHF3-210ENST00000509876 ERVK-10P10266 1014 aa5.25□□□□□ -1.57
PHF3-210ENST00000509876 RHOQP17081 205 aa5.25□□□□□ -1.57
PHF3-210ENST00000509876 HADHAP40939 763 aa5.25□□□□□ -1.57
PHF3-210ENST00000509876 USP10Q14694 798 aaKnown RBP5.25□□□□□ -1.57
PHF3-210ENST00000509876 STAT4Q14765 748 aa5.25□□□□□ -1.57
PHF3-210ENST00000509876 GKAP1Q5VSY0 366 aaPredicted RBP5.25□□□□□ -1.57
PHF3-210ENST00000509876 DOK6Q6PKX4 331 aa5.25□□□□□ -1.57
PHF3-210ENST00000509876 MYO1HQ8N1T3 1032 aa5.25□□□□□ -1.57
PHF3-210ENST00000509876 CCDC33Q8N5R6 958 aa5.25□□□□□ -1.57
PHF3-210ENST00000509876 DQX1Q8TE96 717 aaKnown RBP5.25□□□□□ -1.57
PHF3-210ENST00000509876 CASD1Q96PB1 797 aa5.25□□□□□ -1.57
PHF3-210ENST00000509876 PPP1R10Q96QC0 940 aaKnown RBP5.25□□□□□ -1.57
PHF3-210ENST00000509876 IKZF4Q9H2S9 585 aa5.25□□□□□ -1.57
PHF3-210ENST00000509876 OSGEPQ9NPF4 335 aa5.25□□□□□ -1.57
PHF3-210ENST00000509876 TDP1Q9NUW8 608 aa5.25□□□□□ -1.57
PHF3-210ENST00000509876 ZDHHC7Q9NXF8 308 aa5.25□□□□□ -1.57
PHF3-210ENST00000509876 AGO1Q9UL18 857 aaKnown RBP5.25□□□□□ -1.57
PHF3-210ENST00000509876 SCML2Q9UQR0 700 aa5.25□□□□□ -1.57
PHF3-210ENST00000509876 STARD13Q9Y3M8 1113 aa5.25□□□□□ -1.57
PHF3-210ENST00000509876 ZFP37Q9Y6Q3 630 aaPredicted RBP5.25□□□□□ -1.57
PHF3-210ENST00000509876 LRRC37AA6NMS7 1700 aa5.25□□□□□ -1.57
PHF3-210ENST00000509876 GFAPP14136 432 aa5.24□□□□□ -1.57
PHF3-210ENST00000509876 KDELR1P24390 212 aa5.24□□□□□ -1.57
PHF3-210ENST00000509876 DEFB103AP81534 67 aa5.24□□□□□ -1.57
PHF3-210ENST00000509876 ITPRIPL2Q3MIP1 535 aa5.24□□□□□ -1.57
PHF3-210ENST00000509876 MMEL1Q495T6 779 aa5.24□□□□□ -1.57
PHF3-210ENST00000509876 COLGALT2Q8IYK4 626 aa5.24□□□□□ -1.57
PHF3-210ENST00000509876 CD101Q93033 1021 aa5.24□□□□□ -1.57
PHF3-210ENST00000509876 C8orf33Q9H7E9 229 aaPredicted RBP5.24□□□□□ -1.57
PHF3-210ENST00000509876 CNOT10Q9H9A5 744 aaKnown RBP5.24□□□□□ -1.57
PHF3-210ENST00000509876 AMACRQ9UHK6 382 aa5.24□□□□□ -1.57
PHF3-210ENST00000509876 BCAP29Q9UHQ4 241 aa5.24□□□□□ -1.57
PHF3-210ENST00000509876 E9PAM4 449 aa5.24□□□□□ -1.57
PHF3-210ENST00000509876 MDM4O15151 490 aa5.24□□□□□ -1.57
PHF3-210ENST00000509876 VNN1O95497 513 aa5.24□□□□□ -1.57
PHF3-210ENST00000509876 GPR1P46091 355 aa5.24□□□□□ -1.57
PHF3-210ENST00000509876 SLCO1A2P46721 670 aa5.24□□□□□ -1.57
PHF3-210ENST00000509876 NPY2RP49146 381 aa5.24□□□□□ -1.57
PHF3-210ENST00000509876 CCZ1BP86790 482 aa5.24□□□□□ -1.57
PHF3-210ENST00000509876 CCZ1P86791 482 aaPredicted RBP5.24□□□□□ -1.57
PHF3-210ENST00000509876 PRKCQQ04759 706 aa5.24□□□□□ -1.57
PHF3-210ENST00000509876 KCNMA1Q12791 1236 aa5.24□□□□□ -1.57
PHF3-210ENST00000509876 CCNG2Q16589 344 aa5.24□□□□□ -1.57
PHF3-210ENST00000509876 LYPLAL1Q5VWZ2 237 aa5.24□□□□□ -1.57
PHF3-210ENST00000509876 RAET1GQ6H3X3 334 aa5.24□□□□□ -1.57
PHF3-210ENST00000509876 KIRREL3Q8IZU9 778 aa5.24□□□□□ -1.57
PHF3-210ENST00000509876 ARHGAP24Q8N264 748 aa5.24□□□□□ -1.57
PHF3-210ENST00000509876 KCTD13Q8WZ19 329 aa5.24□□□□□ -1.57
PHF3-210ENST00000509876 RBM15Q96T37 977 aaKnown RBP eCLIP5.24□□□□□ -1.571e-7■■■■■ 30
PHF3-210ENST00000509876 PNKPQ96T60 521 aa5.24□□□□□ -1.57
PHF3-210ENST00000509876 NAT9Q9BTE0 207 aa5.24□□□□□ -1.57
PHF3-210ENST00000509876 SNRNP25Q9BV90 132 aaKnown RBP5.24□□□□□ -1.57
PHF3-210ENST00000509876 FAM96AQ9H5X1 160 aa5.24□□□□□ -1.57
PHF3-210ENST00000509876 GTSE1Q9NYZ3 720 aa5.24□□□□□ -1.57
PHF3-210ENST00000509876 TLR6Q9Y2C9 796 aa5.24□□□□□ -1.57
PHF3-210ENST00000509876 MYH4Q9Y623 1939 aa5.24□□□□□ -1.57
PHF3-210ENST00000509876 DDX60LQ5H9U9 1706 aaKnown RBP5.24□□□□□ -1.57
PHF3-210ENST00000509876 RNASEH2AO75792 299 aaKnown RBP5.24□□□□□ -1.57
PHF3-210ENST00000509876 C1RP00736 705 aa5.24□□□□□ -1.57
PHF3-210ENST00000509876 CALCAP01258 141 aa5.24□□□□□ -1.57
PHF3-210ENST00000509876 GRK3P35626 688 aa5.24□□□□□ -1.57
PHF3-210ENST00000509876 DAOAP59103 153 aa5.24□□□□□ -1.57
PHF3-210ENST00000509876 DMC1Q14565 340 aa5.24□□□□□ -1.57
PHF3-210ENST00000509876 PRR23BQ6ZRT6 265 aa5.24□□□□□ -1.57
PHF3-210ENST00000509876 SLC26A9Q7LBE3 791 aa5.24□□□□□ -1.57
PHF3-210ENST00000509876 JAMLQ86YT9 394 aa5.24□□□□□ -1.57
PHF3-210ENST00000509876 AHI1Q8N157 1196 aa5.24□□□□□ -1.57
PHF3-210ENST00000509876 CRYBG2Q8N1P7 616 aa5.24□□□□□ -1.57
PHF3-210ENST00000509876 TEKT4Q8WW24 435 aa5.24□□□□□ -1.57
PHF3-210ENST00000509876 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.24□□□□□ -1.572e-6■■■■■ 60.5
PHF3-210ENST00000509876 PRCCQ92733 491 aaPredicted RBP5.24□□□□□ -1.57
PHF3-210ENST00000509876 OTUB2Q96DC9 234 aa5.24□□□□□ -1.57
PHF3-210ENST00000509876 MTRRQ9UBK8 725 aa5.24□□□□□ -1.57
PHF3-210ENST00000509876 TRIM10Q9UDY6 481 aa5.24□□□□□ -1.57
PHF3-210ENST00000509876 G3BP2Q9UN86 482 aaKnown RBP5.24□□□□□ -1.57
PHF3-210ENST00000509876 PCDHA3Q9Y5H8 950 aa5.24□□□□□ -1.57
PHF3-210ENST00000509876 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.24□□□□□ -1.57
PHF3-210ENST00000509876 SPACA6W5XKT8 324 aa5.24□□□□□ -1.57
PHF3-210ENST00000509876 NCANO14594 1321 aa5.24□□□□□ -1.57
PHF3-210ENST00000509876 PDZK1P1A8MUH7 402 aa5.24□□□□□ -1.57
PHF3-210ENST00000509876 KCNU1A8MYU2 1149 aa5.24□□□□□ -1.57
PHF3-210ENST00000509876 SUPT3HB4E1H0 165 aa5.24□□□□□ -1.57
PHF3-210ENST00000509876 H3BM21 787 aa5.24□□□□□ -1.57
PHF3-210ENST00000509876 APOC4-APOC2K7ER74 178 aa5.24□□□□□ -1.57
PHF3-210ENST00000509876 SUPT3HO75486 399 aa5.24□□□□□ -1.57
PHF3-210ENST00000509876 APOC2P02655 101 aa5.24□□□□□ -1.57
PHF3-210ENST00000509876 RHOP08100 348 aa5.24□□□□□ -1.57
PHF3-210ENST00000509876 ZNF7P17097 686 aaPredicted RBP5.24□□□□□ -1.57
PHF3-210ENST00000509876 RFC1P35251 1148 aaPredicted RBP5.24□□□□□ -1.57
PHF3-210ENST00000509876 CAMK2GQ13555 558 aaPredicted RBP5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms