RNA–Protein interactions for RNA: ENST00000509818.5

SEC24D-209, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

TSL 1 (best)

Gene SEC24D, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-209ENST00000509818 GARSP41250 739 aaKnown RBP9.3□□□□□ -0.92
SEC24D-209ENST00000509818 PGFP49763 221 aa9.3□□□□□ -0.92
SEC24D-209ENST00000509818 SLC18A1P54219 525 aa9.3□□□□□ -0.92
SEC24D-209ENST00000509818 TBX4P57082 545 aa9.3□□□□□ -0.92
SEC24D-209ENST00000509818 PPARDQ03181 441 aa9.3□□□□□ -0.92
SEC24D-209ENST00000509818 USP41Q3LFD5 358 aa9.3□□□□□ -0.92
SEC24D-209ENST00000509818 MGAT5BQ3V5L5 792 aa9.3□□□□□ -0.92
SEC24D-209ENST00000509818 RTP2Q5QGT7 225 aa9.3□□□□□ -0.92
SEC24D-209ENST00000509818 ITPRIPL1Q6GPH6 555 aa9.3□□□□□ -0.92
SEC24D-209ENST00000509818 RWDD4Q6NW29 188 aaKnown RBP9.3□□□□□ -0.92
SEC24D-209ENST00000509818 LRRC8BQ6P9F7 803 aa9.3□□□□□ -0.92
SEC24D-209ENST00000509818 RNF19BQ6ZMZ0 732 aa9.3□□□□□ -0.92
SEC24D-209ENST00000509818 CCNJLQ8IV13 435 aa9.3□□□□□ -0.92
SEC24D-209ENST00000509818 ZNF473Q8WTR7 871 aaKnown RBP9.3□□□□□ -0.92
SEC24D-209ENST00000509818 CHMP6Q96FZ7 201 aa9.3□□□□□ -0.92
SEC24D-209ENST00000509818 CFAP36Q96G28 342 aa9.3□□□□□ -0.92
SEC24D-209ENST00000509818 B3GALT6Q96L58 329 aa9.3□□□□□ -0.92
SEC24D-209ENST00000509818 FCRL2Q96LA5 508 aaPredicted RBP9.3□□□□□ -0.92
SEC24D-209ENST00000509818 SIGLEC10Q96LC7 697 aa9.3□□□□□ -0.92
SEC24D-209ENST00000509818 CEP295NLQ96MC4 621 aa9.3□□□□□ -0.92
SEC24D-209ENST00000509818 SMC6Q96SB8 1091 aa9.3□□□□□ -0.92
SEC24D-209ENST00000509818 PAFAH2Q99487 392 aa9.3□□□□□ -0.92
SEC24D-209ENST00000509818 EBNA1BP2Q99848 306 aaKnown RBP9.3□□□□□ -0.92
SEC24D-209ENST00000509818 TRABDQ9H4I3 376 aa9.3□□□□□ -0.92
SEC24D-209ENST00000509818 RABEP2Q9H5N1 569 aa9.3□□□□□ -0.92
SEC24D-209ENST00000509818 TMEM39AQ9NV64 488 aa9.3□□□□□ -0.92
SEC24D-209ENST00000509818 GMIPQ9P107 970 aa9.3□□□□□ -0.92
SEC24D-209ENST00000509818 KLHL8Q9P2G9 620 aaPredicted RBP9.3□□□□□ -0.92
SEC24D-209ENST00000509818 HCSTQ9UBK5 93 aa9.3□□□□□ -0.92
SEC24D-209ENST00000509818 SLC27A5Q9Y2P5 690 aa9.3□□□□□ -0.92
SEC24D-209ENST00000509818 PLXNA3P51805 1871 aa9.3□□□□□ -0.92
SEC24D-209ENST00000509818 MYO16Q9Y6X6 1858 aa9.3□□□□□ -0.92
SEC24D-209ENST00000509818 TCRBV9S1A1TA0A576 114 aa9.3□□□□□ -0.92
SEC24D-209ENST00000509818 SDR42E2A6NKP2 422 aa9.3□□□□□ -0.92
SEC24D-209ENST00000509818 PSMD3O43242 534 aa9.3□□□□□ -0.92
SEC24D-209ENST00000509818 MSI1O43347 362 aaKnown RBP9.3□□□□□ -0.92
SEC24D-209ENST00000509818 UPP2O95045 317 aa9.3□□□□□ -0.92
SEC24D-209ENST00000509818 CREB1P16220 341 aa9.3□□□□□ -0.92
SEC24D-209ENST00000509818 GBP2P32456 591 aaPredicted RBP9.3□□□□□ -0.92
SEC24D-209ENST00000509818 MLLT6P55198 1093 aaPredicted RBP9.3□□□□□ -0.92
SEC24D-209ENST00000509818 USP46P62068 366 aa9.3□□□□□ -0.92
SEC24D-209ENST00000509818 MTM1Q13496 603 aa9.3□□□□□ -0.92
SEC24D-209ENST00000509818 PREPLQ4J6C6 727 aaPredicted RBP9.3□□□□□ -0.92
SEC24D-209ENST00000509818 ACBD5Q5T8D3 534 aaPredicted RBP9.3□□□□□ -0.92
SEC24D-209ENST00000509818 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.3□□□□□ -0.92
SEC24D-209ENST00000509818 ZNF534Q76KX8 674 aa9.3□□□□□ -0.92
SEC24D-209ENST00000509818 TAS1R1Q7RTX1 841 aa9.3□□□□□ -0.92
SEC24D-209ENST00000509818 TP53INP2Q8IXH6 220 aa9.3□□□□□ -0.92
SEC24D-209ENST00000509818 TTC9BQ8N6N2 239 aa9.3□□□□□ -0.92
SEC24D-209ENST00000509818 NPWQ8N729 165 aa9.3□□□□□ -0.92
SEC24D-209ENST00000509818 ATP6V0D2Q8N8Y2 350 aa9.3□□□□□ -0.92
SEC24D-209ENST00000509818 NETO2Q8NC67 525 aa9.3□□□□□ -0.92
SEC24D-209ENST00000509818 DYDC1Q8WWB3 177 aa9.3□□□□□ -0.92
SEC24D-209ENST00000509818 MRRFQ96E11 262 aaKnown RBP9.3□□□□□ -0.92
SEC24D-209ENST00000509818 SLC39A13Q96H72 371 aa9.3□□□□□ -0.92
SEC24D-209ENST00000509818 TSGA13Q96PP4 275 aa9.3□□□□□ -0.92
SEC24D-209ENST00000509818 SEPT5Q99719 369 aaPredicted RBP9.3□□□□□ -0.92
SEC24D-209ENST00000509818 GDF15Q99988 308 aa9.3□□□□□ -0.92
SEC24D-209ENST00000509818 SSU72Q9NP77 194 aaKnown RBP9.3□□□□□ -0.92
SEC24D-209ENST00000509818 OSER1Q9NX31 292 aa9.3□□□□□ -0.92
SEC24D-209ENST00000509818 FNIP2Q9P278 1114 aa9.3□□□□□ -0.92
SEC24D-209ENST00000509818 NUDT5Q9UKK9 219 aa9.3□□□□□ -0.92
SEC24D-209ENST00000509818 TBX21Q9UL17 535 aa9.3□□□□□ -0.92
SEC24D-209ENST00000509818 SMG5Q9UPR3 1016 aaKnown RBP9.3□□□□□ -0.92
SEC24D-209ENST00000509818 ATP11BQ9Y2G3 1177 aa9.3□□□□□ -0.92
SEC24D-209ENST00000509818 BACE2Q9Y5Z0 518 aa9.3□□□□□ -0.92
SEC24D-209ENST00000509818 CAPN7Q9Y6W3 813 aa9.3□□□□□ -0.92
SEC24D-209ENST00000509818 CDH23Q9H251 3354 aa9.29□□□□□ -0.92
SEC24D-209ENST00000509818 IQANK1A0A1B0GTG1 560 aa9.29□□□□□ -0.92
SEC24D-209ENST00000509818 ABHD14A-ACY1A0A1B0GW23 586 aa9.29□□□□□ -0.92
SEC24D-209ENST00000509818 FAM47DPA6NHR8 397 aa9.29□□□□□ -0.92
SEC24D-209ENST00000509818 ERI2A8K979 691 aaKnown RBP9.29□□□□□ -0.92
SEC24D-209ENST00000509818 FOXO6A8MYZ6 492 aa9.29□□□□□ -0.92
SEC24D-209ENST00000509818 KCNK1O00180 336 aa9.29□□□□□ -0.92
SEC24D-209ENST00000509818 SOX1O00570 391 aaPredicted RBP9.29□□□□□ -0.92
SEC24D-209ENST00000509818 PRPF4O43172 522 aaKnown RBP eCLIP9.29□□□□□ -0.92
SEC24D-209ENST00000509818 EFEMP2O95967 443 aa9.29□□□□□ -0.92
SEC24D-209ENST00000509818 APOEP02649 317 aa9.29□□□□□ -0.92
SEC24D-209ENST00000509818 INHBAP08476 426 aa9.29□□□□□ -0.92
SEC24D-209ENST00000509818 PRKCHP24723 683 aa9.29□□□□□ -0.92
SEC24D-209ENST00000509818 CCNCP24863 283 aa9.29□□□□□ -0.92
SEC24D-209ENST00000509818 PSMB4P28070 264 aa9.29□□□□□ -0.92
SEC24D-209ENST00000509818 MAGEA10P43363 369 aaPredicted RBP9.29□□□□□ -0.92
SEC24D-209ENST00000509818 TUFMP49411 452 aaKnown RBP9.29□□□□□ -0.92
SEC24D-209ENST00000509818 TUBP50607 506 aa9.29□□□□□ -0.92
SEC24D-209ENST00000509818 TAF10Q12962 218 aa9.29□□□□□ -0.92
SEC24D-209ENST00000509818 DUSP4Q13115 394 aa9.29□□□□□ -0.92
SEC24D-209ENST00000509818 MTA1Q13330 715 aa9.29□□□□□ -0.92
SEC24D-209ENST00000509818 TRIP4Q15650 581 aaPredicted RBP9.29□□□□□ -0.92
SEC24D-209ENST00000509818 TEX44Q53QW1 395 aa9.29□□□□□ -0.92
SEC24D-209ENST00000509818 FAM182AQ5T1J6 154 aa9.29□□□□□ -0.92
SEC24D-209ENST00000509818 LGSNQ5TDP6 509 aa9.29□□□□□ -0.92
SEC24D-209ENST00000509818 MANEALQ5VSG8 457 aa9.29□□□□□ -0.92
SEC24D-209ENST00000509818 RSPO2Q6UXX9 243 aaPredicted RBP9.29□□□□□ -0.92
SEC24D-209ENST00000509818 CYS1Q717R9 158 aa9.29□□□□□ -0.92
SEC24D-209ENST00000509818 CPLX4Q7Z7G2 160 aa9.29□□□□□ -0.92
SEC24D-209ENST00000509818 LRRC49Q8IUZ0 686 aa9.29□□□□□ -0.92
SEC24D-209ENST00000509818 AGGF1Q8N302 714 aaeCLIP9.29□□□□□ -0.927e-24■■■■■ 28.5
SEC24D-209ENST00000509818 PDCD7Q8N8D1 485 aaKnown RBP9.29□□□□□ -0.92
SEC24D-209ENST00000509818 ANKRD42Q8N9B4 389 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms