RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 UNC45BQ8IWX7 931 aa16.49■□□□□ 0.23
RAB40C-202ENST00000509637 LRIG1Q96JA1 1093 aa16.49■□□□□ 0.23
RAB40C-202ENST00000509637 HSFY1Q96LI6 401 aa16.49■□□□□ 0.23
RAB40C-202ENST00000509637 FBRSQ9HAH7 460 aa16.49■□□□□ 0.23
RAB40C-202ENST00000509637 BPTFQ12830 3046 aa16.49■□□□□ 0.23
RAB40C-202ENST00000509637 MYLKQ15746 1914 aa16.49■□□□□ 0.23
RAB40C-202ENST00000509637 ITIH6Q6UXX5 1313 aa16.48■□□□□ 0.23
RAB40C-202ENST00000509637 NYNRINQ9P2P1 1898 aaKnown RBP16.48■□□□□ 0.23
RAB40C-202ENST00000509637 PPP1R3GB7ZBB8 358 aa16.48■□□□□ 0.23
RAB40C-202ENST00000509637 RNF103O00237 685 aa16.48■□□□□ 0.23
RAB40C-202ENST00000509637 IRAK2O43187 625 aa16.48■□□□□ 0.23
RAB40C-202ENST00000509637 IGLV3-25P01717 112 aa16.48■□□□□ 0.23
RAB40C-202ENST00000509637 TBXAS1P24557 533 aaPredicted RBP16.48■□□□□ 0.23
RAB40C-202ENST00000509637 MZF1P28698 734 aaPredicted RBP16.48■□□□□ 0.23
RAB40C-202ENST00000509637 SLC8A1P32418 973 aa16.48■□□□□ 0.23
RAB40C-202ENST00000509637 DRD3P35462 400 aa16.48■□□□□ 0.23
RAB40C-202ENST00000509637 GRK6P43250 576 aa16.48■□□□□ 0.23
RAB40C-202ENST00000509637 SLC11A2P49281 568 aa16.48■□□□□ 0.23
RAB40C-202ENST00000509637 CCT8P50990 548 aa16.48■□□□□ 0.23
RAB40C-202ENST00000509637 RACK1P63244 317 aaKnown RBP16.48■□□□□ 0.23
RAB40C-202ENST00000509637 E2F5Q15329 346 aa16.48■□□□□ 0.23
RAB40C-202ENST00000509637 TEAD4Q15561 434 aa16.48■□□□□ 0.23
RAB40C-202ENST00000509637 ZC3H12AQ5D1E8 599 aaKnown RBP16.48■□□□□ 0.23
RAB40C-202ENST00000509637 NUGGCQ68CJ6 796 aa16.48■□□□□ 0.23
RAB40C-202ENST00000509637 CIR1Q86X95 450 aaPredicted RBP16.48■□□□□ 0.23
RAB40C-202ENST00000509637 SPATS2Q86XZ4 545 aaKnown RBP16.48■□□□□ 0.23
RAB40C-202ENST00000509637 LGI2Q8N0V4 545 aa16.48■□□□□ 0.23
RAB40C-202ENST00000509637 PPM1KQ8N3J5 372 aa16.48■□□□□ 0.23
RAB40C-202ENST00000509637 HJURPQ8NCD3 748 aaPredicted RBP16.48■□□□□ 0.23
RAB40C-202ENST00000509637 SAP25Q8TEE9 199 aa16.48■□□□□ 0.23
RAB40C-202ENST00000509637 ALG14Q96F25 216 aa16.48■□□□□ 0.23
RAB40C-202ENST00000509637 NT5C1BQ96P26 610 aa16.48■□□□□ 0.23
RAB40C-202ENST00000509637 GSDMAQ96QA5 445 aa16.48■□□□□ 0.23
RAB40C-202ENST00000509637 PRMT1Q99873 361 aaKnown RBP16.48■□□□□ 0.23
RAB40C-202ENST00000509637 ADAMTS1Q9UHI8 967 aa16.48■□□□□ 0.23
RAB40C-202ENST00000509637 MAN1B1Q9UKM7 699 aa16.48■□□□□ 0.23
RAB40C-202ENST00000509637 SARDHQ9UL12 918 aa16.48■□□□□ 0.23
RAB40C-202ENST00000509637 CNTN6Q9UQ52 1028 aa16.48■□□□□ 0.23
RAB40C-202ENST00000509637 LUC7L3O95232 432 aaKnown RBP16.47■□□□□ 0.23
RAB40C-202ENST00000509637 MOCS2O96007 188 aaPredicted RBP16.47■□□□□ 0.23
RAB40C-202ENST00000509637 YWHAEP62258 255 aaKnown RBP16.47■□□□□ 0.23
RAB40C-202ENST00000509637 SUZ12Q15022 739 aaKnown RBP16.47■□□□□ 0.23
RAB40C-202ENST00000509637 RAP1GAP2Q684P5 730 aa16.47■□□□□ 0.23
RAB40C-202ENST00000509637 WDTC1Q8N5D0 677 aa16.47■□□□□ 0.23
RAB40C-202ENST00000509637 EHBP1Q8NDI1 1231 aa16.47■□□□□ 0.23
RAB40C-202ENST00000509637 FRS2Q8WU20 508 aa16.47■□□□□ 0.23
RAB40C-202ENST00000509637 ELF4Q99607 663 aaPredicted RBP16.47■□□□□ 0.23
RAB40C-202ENST00000509637 SLC4A5Q9BY07 1137 aa16.47■□□□□ 0.23
RAB40C-202ENST00000509637 IRX2Q9BZI1 471 aaPredicted RBP16.47■□□□□ 0.23
RAB40C-202ENST00000509637 ARHGAP20Q9P2F6 1191 aa16.47■□□□□ 0.23
RAB40C-202ENST00000509637 TLR6Q9Y2C9 796 aa16.47■□□□□ 0.23
RAB40C-202ENST00000509637 COL5A1P20908 1838 aaPredicted RBP16.47■□□□□ 0.23
RAB40C-202ENST00000509637 TLX3O43711 291 aaPredicted RBP16.46■□□□□ 0.23
RAB40C-202ENST00000509637 RNASEH2AO75792 299 aaKnown RBP16.46■□□□□ 0.23
RAB40C-202ENST00000509637 ITPKBP27987 946 aa16.46■□□□□ 0.23
RAB40C-202ENST00000509637 PSMD8P48556 350 aa16.46■□□□□ 0.23
RAB40C-202ENST00000509637 APBA1Q02410 837 aa16.46■□□□□ 0.23
RAB40C-202ENST00000509637 LRRC63Q05C16 580 aa16.46■□□□□ 0.23
RAB40C-202ENST00000509637 TTC31Q49AM3 519 aaPredicted RBP16.46■□□□□ 0.23
RAB40C-202ENST00000509637 GJB7Q6PEY0 223 aa16.46■□□□□ 0.23
RAB40C-202ENST00000509637 OR2T34Q8NGX1 318 aa16.46■□□□□ 0.23
RAB40C-202ENST00000509637 GANCQ8TET4 914 aa16.46■□□□□ 0.23
RAB40C-202ENST00000509637 TSC1Q92574 1164 aa16.46■□□□□ 0.23
RAB40C-202ENST00000509637 GOLGA1Q92805 767 aa16.46■□□□□ 0.23
RAB40C-202ENST00000509637 FAM131CQ96AQ9 280 aa16.46■□□□□ 0.23
RAB40C-202ENST00000509637 TSG101Q99816 390 aa16.46■□□□□ 0.23
RAB40C-202ENST00000509637 METTL14Q9HCE5 456 aaKnown RBP16.46■□□□□ 0.23
RAB40C-202ENST00000509637 SCUBE2Q9NQ36 999 aa16.46■□□□□ 0.23
RAB40C-202ENST00000509637 A0A087WV48 116 aa16.45■□□□□ 0.22
RAB40C-202ENST00000509637 TARSL2A2RTX5 802 aaKnown RBP16.45■□□□□ 0.22
RAB40C-202ENST00000509637 ENC1O14682 589 aa16.45■□□□□ 0.22
RAB40C-202ENST00000509637 FBXO21O94952 628 aa16.45■□□□□ 0.22
RAB40C-202ENST00000509637 ASLP04424 464 aa16.45■□□□□ 0.22
RAB40C-202ENST00000509637 TACR2P21452 398 aa16.45■□□□□ 0.22
RAB40C-202ENST00000509637 CCR5P51681 352 aa16.45■□□□□ 0.22
RAB40C-202ENST00000509637 ADPRHP54922 357 aa16.45■□□□□ 0.22
RAB40C-202ENST00000509637 ECT2LQ008S8 904 aa16.45■□□□□ 0.22
RAB40C-202ENST00000509637 NNTQ13423 1086 aa16.45■□□□□ 0.22
RAB40C-202ENST00000509637 ARTNQ5T4W7 220 aa16.45■□□□□ 0.22
RAB40C-202ENST00000509637 CXorf57Q6NSI4 855 aaKnown RBP16.45■□□□□ 0.22
RAB40C-202ENST00000509637 TRIM59Q8IWR1 403 aa16.45■□□□□ 0.22
RAB40C-202ENST00000509637 EID2Q8N6I1 236 aa16.45■□□□□ 0.22
RAB40C-202ENST00000509637 KDM1BQ8NB78 822 aa16.45■□□□□ 0.22
RAB40C-202ENST00000509637 RMND1Q9NWS8 449 aa16.45■□□□□ 0.22
RAB40C-202ENST00000509637 NCKAP1Q9Y2A7 1128 aa16.45■□□□□ 0.22
RAB40C-202ENST00000509637 CA5BQ9Y2D0 317 aa16.45■□□□□ 0.22
RAB40C-202ENST00000509637 BECN2A8MW95 431 aa16.44■□□□□ 0.22
RAB40C-202ENST00000509637 KCNU1A8MYU2 1149 aa16.44■□□□□ 0.22
RAB40C-202ENST00000509637 E5RJQ4 531 aa16.44■□□□□ 0.22
RAB40C-202ENST00000509637 LATO43561 262 aa16.44■□□□□ 0.22
RAB40C-202ENST00000509637 RTN2O75298 545 aa16.44■□□□□ 0.22
RAB40C-202ENST00000509637 TRUB2O95900 331 aaKnown RBP16.44■□□□□ 0.22
RAB40C-202ENST00000509637 SRPRAP08240 638 aaKnown RBP16.44■□□□□ 0.22
RAB40C-202ENST00000509637 PDGFRAP16234 1089 aa16.44■□□□□ 0.22
RAB40C-202ENST00000509637 GOT1P17174 413 aa16.44■□□□□ 0.22
RAB40C-202ENST00000509637 CD38P28907 300 aa16.44■□□□□ 0.22
RAB40C-202ENST00000509637 ACADVLP49748 655 aa16.44■□□□□ 0.22
RAB40C-202ENST00000509637 NXPH1P58417 271 aa16.44■□□□□ 0.22
RAB40C-202ENST00000509637 CDH18Q13634 790 aa16.44■□□□□ 0.22
RAB40C-202ENST00000509637 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms